Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is yqiK [H]

Identifier: 89054285

GI number: 89054285

Start: 1781787

End: 1783469

Strand: Reverse

Name: yqiK [H]

Synonym: Jann_1794

Alternate gene names: 89054285

Gene position: 1783469-1781787 (Counterclockwise)

Preceding gene: 89054286

Following gene: 89054283

Centisome position: 41.3

GC content: 62.63

Gene sequence:

>1683_bases
ATGGAATTTATTCTGATTATCGTCGCCGCCGTCATTGGCTTTCTGGTCTTTGCGGGCCTGATCATCGGGCGGCTCTACAA
GCGCACGACGCGAGAGCTGTCGTTGGTGAAGACGGGTGCCGGTGGCAAGAAGGTGATCATGGATGGCGGCACGTTGGTGA
TCCCGCTTCTTCATGAAGTGTCGCCCGTCAACATGAAGACCCTGCGCCTGGAGGTTCGCCGCACCGGAGAAGGCGCGCTG
ATCACGCAGGACCGGATGCGTGTGGACGTGGGCGTGGAGTTTTACGTTTCTGTCATGGCAACTGACGAGGGGATCGCGCG
GGCGGCCCAAACGCTCGGTGACCGGACGTTTTATGTCGATCAGCTGCGCGAGATGATTGAGGGCAAACTGATCGACGGCC
TGCGAGCCGTGGCCGCGAAGATGACGATGGACAGTCTGCATGAAAACCGCTCGGACTTTGTGCAGCAGGTGCAGAATGCG
ATTTCTGAAGATCTGTTGAAGAACGGTTTGTCGCTGGAATCGGTCTCGCTCACCGCGCTGGACCAGACACCCTTCGAGAG
CCTCGATGAAAACAACGCGTTCAACGCCGTCGGCATGCGCAAACTGGCCGAGGTGATTGCAAAATCCAAGAAAGAACGTG
CCGAGATTGACGCCGATGCCGAAGTGGCTGTGCGCCGCGCGGCCATGGAGGGGGAGCGCCAGAAGCTCTCCATCCAGCAG
GATGAAGAGCAGGCGGCGATCGCTCAGGTGCAAGAGATCGAGACGATGAAAGCCGCCCAGGAGATGGAGATTTCGCTGCG
TCGCGAGGATTCGATGCGCGAGAGTGAACGCGCCCGGATTGCCCGCGAAGAGCAGGTGCGCTCAGCCGAGATTAACCGCG
AGCGCAATATCCGCGAGGCAGAGATCTCCAAGGAGCGGGAGCTGGAAGTGGCGGAGCAAGAGCGCCAGATCATCATCCAG
CAGAAGTCCGAGGAAGAGAGCCGCGCGCGGGCGTCGGCTGACCTGGCAAGGGCTGAGGCGACAAAGGCCACGGAAGCTGT
GGCGACCGCCCGAGAGGTGGCAGAGGCCGAGCGTGTGAAGCAGATCGCGCTGATTGAGGCGGCGCGGGAAGCCGAGCGCG
AGGCGACCAAGATCCGCCTTGCGGCTGCCGCCGAGAAAGATGCGGCCCAGGACCGGGCCGACGCCCGTCGCGAGGAAGCA
CAGGCCGAGGCCGATGCCATCTCCATCCGCGCAGACGCCAAGAAAAAGGACATGCTGGCAGAGGCCGAAGGGACACGTGC
GATCACCGAGGCCGAAAACGCGCTGTCGGAGCAGATCGTCGGCATGAAGATCGACATGGCCCGGATTGAGGCGATCCCTG
GCATCATGGAGCAGATGGTCAAGCCGGTAGAGAAGATCGGAGAGATCAAGATCCATCAGGTCGGCGGTCTGGGTGGCGGC
CAAGGTGGCGGCGGCGCAGGTGGATCTGGCGGCGACAAGCCCGTGGTAAACCAGGCGCTGGATTCCATCATGGGCATGGC
GGTACAGATGCCGGCCCTGCGGAAGTTGGGCGACGAGCTGGGGCTGAGCCTGGAAAGCGGTGTGGAAGGTCTGGCCGAAA
GCGCGCTGACAGCCCGGCCCAACAACGCACCTGCGGTGGAAGCGCCCAAGCCAGCCGCGGACCCCGCCTCGCCCGCAGAG
TAA

Upstream 100 bases:

>100_bases
GGTTCTTGTTCTGCGCCACCGCCCCACCGGCGGGTTTCGTCTGATCGCGCTCTGAGGCGGCCCCTTCGCCCCAAGCGCCC
TATTTGAAAGGACTAACTCC

Downstream 100 bases:

>100_bases
GGCCGCGATGGGCGTCGTTTGATCCGGGGCAAAGACCCTGGCCAGAGGGCGGCCCATCCACCGATATCAGCGCGGGCATA
GCCCGCACAGCCATCTGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 560; Mature: 560

Protein sequence:

>560_residues
MEFILIIVAAVIGFLVFAGLIIGRLYKRTTRELSLVKTGAGGKKVIMDGGTLVIPLLHEVSPVNMKTLRLEVRRTGEGAL
ITQDRMRVDVGVEFYVSVMATDEGIARAAQTLGDRTFYVDQLREMIEGKLIDGLRAVAAKMTMDSLHENRSDFVQQVQNA
ISEDLLKNGLSLESVSLTALDQTPFESLDENNAFNAVGMRKLAEVIAKSKKERAEIDADAEVAVRRAAMEGERQKLSIQQ
DEEQAAIAQVQEIETMKAAQEMEISLRREDSMRESERARIAREEQVRSAEINRERNIREAEISKERELEVAEQERQIIIQ
QKSEEESRARASADLARAEATKATEAVATAREVAEAERVKQIALIEAAREAEREATKIRLAAAAEKDAAQDRADARREEA
QAEADAISIRADAKKKDMLAEAEGTRAITEAENALSEQIVGMKIDMARIEAIPGIMEQMVKPVEKIGEIKIHQVGGLGGG
QGGGGAGGSGGDKPVVNQALDSIMGMAVQMPALRKLGDELGLSLESGVEGLAESALTARPNNAPAVEAPKPAADPASPAE

Sequences:

>Translated_560_residues
MEFILIIVAAVIGFLVFAGLIIGRLYKRTTRELSLVKTGAGGKKVIMDGGTLVIPLLHEVSPVNMKTLRLEVRRTGEGAL
ITQDRMRVDVGVEFYVSVMATDEGIARAAQTLGDRTFYVDQLREMIEGKLIDGLRAVAAKMTMDSLHENRSDFVQQVQNA
ISEDLLKNGLSLESVSLTALDQTPFESLDENNAFNAVGMRKLAEVIAKSKKERAEIDADAEVAVRRAAMEGERQKLSIQQ
DEEQAAIAQVQEIETMKAAQEMEISLRREDSMRESERARIAREEQVRSAEINRERNIREAEISKERELEVAEQERQIIIQ
QKSEEESRARASADLARAEATKATEAVATAREVAEAERVKQIALIEAAREAEREATKIRLAAAAEKDAAQDRADARREEA
QAEADAISIRADAKKKDMLAEAEGTRAITEAENALSEQIVGMKIDMARIEAIPGIMEQMVKPVEKIGEIKIHQVGGLGGG
QGGGGAGGSGGDKPVVNQALDSIMGMAVQMPALRKLGDELGLSLESGVEGLAESALTARPNNAPAVEAPKPAADPASPAE
>Mature_560_residues
MEFILIIVAAVIGFLVFAGLIIGRLYKRTTRELSLVKTGAGGKKVIMDGGTLVIPLLHEVSPVNMKTLRLEVRRTGEGAL
ITQDRMRVDVGVEFYVSVMATDEGIARAAQTLGDRTFYVDQLREMIEGKLIDGLRAVAAKMTMDSLHENRSDFVQQVQNA
ISEDLLKNGLSLESVSLTALDQTPFESLDENNAFNAVGMRKLAEVIAKSKKERAEIDADAEVAVRRAAMEGERQKLSIQQ
DEEQAAIAQVQEIETMKAAQEMEISLRREDSMRESERARIAREEQVRSAEINRERNIREAEISKERELEVAEQERQIIIQ
QKSEEESRARASADLARAEATKATEAVATAREVAEAERVKQIALIEAAREAEREATKIRLAAAAEKDAAQDRADARREEA
QAEADAISIRADAKKKDMLAEAEGTRAITEAENALSEQIVGMKIDMARIEAIPGIMEQMVKPVEKIGEIKIHQVGGLGGG
QGGGGAGGSGGDKPVVNQALDSIMGMAVQMPALRKLGDELGLSLESGVEGLAESALTARPNNAPAVEAPKPAADPASPAE

Specific function: Unknown

COG id: COG2268

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yuaG and Synechocystis PCC 6803 sll1021 [H]

Homologues:

Organism=Escherichia coli, GI1789430, Length=530, Percent_Identity=43.2075471698113, Blast_Score=381, Evalue=1e-107,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 60721; Mature: 60721

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFILIIVAAVIGFLVFAGLIIGRLYKRTTRELSLVKTGAGGKKVIMDGGTLVIPLLHEV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEECCEEEEEHHHCC
SPVNMKTLRLEVRRTGEGALITQDRMRVDVGVEFYVSVMATDEGIARAAQTLGDRTFYVD
CCCCCEEEEEEEEECCCCCEEECCCCEEEECCEEEEEEEECCHHHHHHHHHHCCCHHHHH
QLREMIEGKLIDGLRAVAAKMTMDSLHENRSDFVQQVQNAISEDLLKNGLSLESVSLTAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC
DQTPFESLDENNAFNAVGMRKLAEVIAKSKKERAEIDADAEVAVRRAAMEGERQKLSIQQ
CCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHCCCCC
DEEQAAIAQVQEIETMKAAQEMEISLRREDSMRESERARIAREEQVRSAEINRERNIREA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
EISKERELEVAEQERQIIIQQKSEEESRARASADLARAEATKATEAVATAREVAEAERVK
HHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QIALIEAAREAEREATKIRLAAAAEKDAAQDRADARREEAQAEADAISIRADAKKKDMLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHH
EAEGTRAITEAENALSEQIVGMKIDMARIEAIPGIMEQMVKPVEKIGEIKIHQVGGLGGG
HCCCCHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCC
QGGGGAGGSGGDKPVVNQALDSIMGMAVQMPALRKLGDELGLSLESGVEGLAESALTARP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
NNAPAVEAPKPAADPASPAE
CCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEFILIIVAAVIGFLVFAGLIIGRLYKRTTRELSLVKTGAGGKKVIMDGGTLVIPLLHEV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEECCEEEEEHHHCC
SPVNMKTLRLEVRRTGEGALITQDRMRVDVGVEFYVSVMATDEGIARAAQTLGDRTFYVD
CCCCCEEEEEEEEECCCCCEEECCCCEEEECCEEEEEEEECCHHHHHHHHHHCCCHHHHH
QLREMIEGKLIDGLRAVAAKMTMDSLHENRSDFVQQVQNAISEDLLKNGLSLESVSLTAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC
DQTPFESLDENNAFNAVGMRKLAEVIAKSKKERAEIDADAEVAVRRAAMEGERQKLSIQQ
CCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHCCCCC
DEEQAAIAQVQEIETMKAAQEMEISLRREDSMRESERARIAREEQVRSAEINRERNIREA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
EISKERELEVAEQERQIIIQQKSEEESRARASADLARAEATKATEAVATAREVAEAERVK
HHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QIALIEAAREAEREATKIRLAAAAEKDAAQDRADARREEAQAEADAISIRADAKKKDMLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHH
EAEGTRAITEAENALSEQIVGMKIDMARIEAIPGIMEQMVKPVEKIGEIKIHQVGGLGGG
HCCCCHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCC
QGGGGAGGSGGDKPVVNQALDSIMGMAVQMPALRKLGDELGLSLESGVEGLAESALTARP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
NNAPAVEAPKPAADPASPAE
CCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]