Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is nagA [H]
Identifier: 89053852
GI number: 89053852
Start: 1325100
End: 1326260
Strand: Direct
Name: nagA [H]
Synonym: Jann_1361
Alternate gene names: 89053852
Gene position: 1325100-1326260 (Clockwise)
Preceding gene: 89053851
Following gene: 89053854
Centisome position: 30.69
GC content: 65.55
Gene sequence:
>1161_bases ATGAGTGGCGGCTTGCGCGCCCTGACCGGGGCTGAGATCTTTGACGGCACGACGCGTCATGCCCGCCACGCATTGGTATG GGATGGCGGGGTTGTGCGTGGCATCGTGCCCGAGGCAGAGGTGCCCGAGGCGGCAGATGTGACGTGTCTGACGGGTGGCC TCCTGTGCCCCGGGTTCGTTGACCTTCAGGTGAATGGCGGTGGGGGCGTCCTGTTCAATGACGACCAAAGCGTTGCCGCC TTGCGTATGATCGCCGCCGCCCATGCAGGCCTTGGGGCGACGTCCATTCTGCCGACGCTGATCACCGATACGCCGGACCG GACCGACAATGCGATCTCTGCCGTGGCCGATGCGATTGATCAGGGCGTGGACGGCATTATCGGTCTGCATCTGGAAGGGC CGCATCTGTCGGTGCCCCGCAAAGGGGCCCATGATGCGACGCTGATCCGGGCGATGGACGACGCGGATTTGGCCCGCCTT CTGGACGCAGCCATTCGGTTGCCGCTCCTGAAAATCACCGTCGCGCCCGAGACGGTCACGCCGGATCAGATCGCAGCGCT TCACGATGCGGGTGTTCTGGTGTCGCTAGGCCACAGCGACGCGGGGTTCGCCACATGTCAGGCTGCGGCAAGCGCGGGCG CGCGATGTGTGACCCATCTGTTCAATGCGATGAGCCAGCTTGGCAACCGCGAACCCGGCCTTGTGGGCGCGGCCCTGACA CTGGGGTCGCTGTCGGCGGGGCTGATTGCCGATGGCGTTCATGTGCACGAGGCCTCGGTTCGGGCGGCGATGGCTGCAAA GGCAGGTCCGGGGCAGATGTTCCTGGTCAGCGATGCCATGGCGGTCGCGGGATCTGACATCGACAGTTTCACACTGAATG ACCGCCGGATCCTGCGCCGCGACGGTCGTCTGACATTGGAGAATGGCACCTTGGCGGGGGCCGACCTTGACCTGCTGACA GCGGTACGAAATATGGTGCTGTGGGGCGCGGCATCGGAAGAGGTCGCCCTGGCGATGGCCACTTCGATCCCCGCTGACCT ATGCGCCGCCGCGTGCAACGTTGGCCGGCTGGAAGAGGGGGCCAAGGCCGACATCCTGCACCTGATGCCCGGCCAGACGA CCTGTGCCGCGATCTGGCAATCGGGGCGGCAGATCGTCTAG
Upstream 100 bases:
>100_bases CATTGATCGTGTCATTCTACGCGATGATCGAGAAAGTTGCGGCAGAGCGGGGCGTGAACCCCGATGCGCCGAGGCACCTG AACAAGGTCACGGAAACCGT
Downstream 100 bases:
>100_bases CACGTACATCTCGGCCTTACCGCCCCGTCAGATGCGAGACACACGCCAATCGGGGTAGAGCCCGGCATCCCGGCAGAAGG GCCCCGTATCGTGGCCCGAG
Product: N-acetylglucosamine 6-phosphate deacetylase
Products: NA
Alternate protein names: GlcNAc 6-P deacetylase [H]
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MSGGLRALTGAEIFDGTTRHARHALVWDGGVVRGIVPEAEVPEAADVTCLTGGLLCPGFVDLQVNGGGGVLFNDDQSVAA LRMIAAAHAGLGATSILPTLITDTPDRTDNAISAVADAIDQGVDGIIGLHLEGPHLSVPRKGAHDATLIRAMDDADLARL LDAAIRLPLLKITVAPETVTPDQIAALHDAGVLVSLGHSDAGFATCQAAASAGARCVTHLFNAMSQLGNREPGLVGAALT LGSLSAGLIADGVHVHEASVRAAMAAKAGPGQMFLVSDAMAVAGSDIDSFTLNDRRILRRDGRLTLENGTLAGADLDLLT AVRNMVLWGAASEEVALAMATSIPADLCAAACNVGRLEEGAKADILHLMPGQTTCAAIWQSGRQIV
Sequences:
>Translated_386_residues MSGGLRALTGAEIFDGTTRHARHALVWDGGVVRGIVPEAEVPEAADVTCLTGGLLCPGFVDLQVNGGGGVLFNDDQSVAA LRMIAAAHAGLGATSILPTLITDTPDRTDNAISAVADAIDQGVDGIIGLHLEGPHLSVPRKGAHDATLIRAMDDADLARL LDAAIRLPLLKITVAPETVTPDQIAALHDAGVLVSLGHSDAGFATCQAAASAGARCVTHLFNAMSQLGNREPGLVGAALT LGSLSAGLIADGVHVHEASVRAAMAAKAGPGQMFLVSDAMAVAGSDIDSFTLNDRRILRRDGRLTLENGTLAGADLDLLT AVRNMVLWGAASEEVALAMATSIPADLCAAACNVGRLEEGAKADILHLMPGQTTCAAIWQSGRQIV >Mature_385_residues SGGLRALTGAEIFDGTTRHARHALVWDGGVVRGIVPEAEVPEAADVTCLTGGLLCPGFVDLQVNGGGGVLFNDDQSVAAL RMIAAAHAGLGATSILPTLITDTPDRTDNAISAVADAIDQGVDGIIGLHLEGPHLSVPRKGAHDATLIRAMDDADLARLL DAAIRLPLLKITVAPETVTPDQIAALHDAGVLVSLGHSDAGFATCQAAASAGARCVTHLFNAMSQLGNREPGLVGAALTL GSLSAGLIADGVHVHEASVRAAMAAKAGPGQMFLVSDAMAVAGSDIDSFTLNDRRILRRDGRLTLENGTLAGADLDLLTA VRNMVLWGAASEEVALAMATSIPADLCAAACNVGRLEEGAKADILHLMPGQTTCAAIWQSGRQIV
Specific function: N-acetylglucosamine utilization. [C]
COG id: COG1820
COG function: function code G; N-acetylglucosamine-6-phosphate deacetylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nagA family [H]
Homologues:
Organism=Homo sapiens, GI21361513, Length=381, Percent_Identity=30.9711286089239, Blast_Score=126, Evalue=4e-29, Organism=Homo sapiens, GI224922791, Length=362, Percent_Identity=31.767955801105, Blast_Score=124, Evalue=2e-28, Organism=Escherichia coli, GI1786892, Length=370, Percent_Identity=37.8378378378378, Blast_Score=224, Evalue=7e-60, Organism=Caenorhabditis elegans, GI17553768, Length=383, Percent_Identity=29.242819843342, Blast_Score=134, Evalue=6e-32, Organism=Drosophila melanogaster, GI281361140, Length=357, Percent_Identity=31.9327731092437, Blast_Score=146, Evalue=2e-35, Organism=Drosophila melanogaster, GI19920392, Length=341, Percent_Identity=32.8445747800587, Blast_Score=145, Evalue=6e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR003764 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.1.25 [H]
Molecular weight: Translated: 39416; Mature: 39285
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGGLRALTGAEIFDGTTRHARHALVWDGGVVRGIVPEAEVPEAADVTCLTGGLLCPGFV CCCCCCCCCCCHHHCCCHHHHCEEEEECCCEEECCCCCCCCCCCCCEEEEECCCCCCCEE DLQVNGGGGVLFNDDQSVAALRMIAAAHAGLGATSILPTLITDTPDRTDNAISAVADAID EEEEECCCEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHH QGVDGIIGLHLEGPHLSVPRKGAHDATLIRAMDDADLARLLDAAIRLPLLKITVAPETVT CCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCEEEEEECCCCCC PDQIAALHDAGVLVSLGHSDAGFATCQAAASAGARCVTHLFNAMSQLGNREPGLVGAALT HHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEEEHHHH LGSLSAGLIADGVHVHEASVRAAMAAKAGPGQMFLVSDAMAVAGSDIDSFTLNDRRILRR HHCCCCCHHCCCCEEEHHHHHHHHHHCCCCCCEEEEECHHHHCCCCCCCEECCCHHHHHC DGRLTLENGTLAGADLDLLTAVRNMVLWGAASEEVALAMATSIPADLCAAACNVGRLEEG CCCEEEECCEECCCCHHHHHHHHHHHEECCCCCCEEEEHHHCCCHHHHHHHHCCCCCCCC AKADILHLMPGQTTCAAIWQSGRQIV CCCCEEEECCCCHHHHHHHHCCCCCC >Mature Secondary Structure SGGLRALTGAEIFDGTTRHARHALVWDGGVVRGIVPEAEVPEAADVTCLTGGLLCPGFV CCCCCCCCCCHHHCCCHHHHCEEEEECCCEEECCCCCCCCCCCCCEEEEECCCCCCCEE DLQVNGGGGVLFNDDQSVAALRMIAAAHAGLGATSILPTLITDTPDRTDNAISAVADAID EEEEECCCEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHH QGVDGIIGLHLEGPHLSVPRKGAHDATLIRAMDDADLARLLDAAIRLPLLKITVAPETVT CCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCEEEEEECCCCCC PDQIAALHDAGVLVSLGHSDAGFATCQAAASAGARCVTHLFNAMSQLGNREPGLVGAALT HHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEEEHHHH LGSLSAGLIADGVHVHEASVRAAMAAKAGPGQMFLVSDAMAVAGSDIDSFTLNDRRILRR HHCCCCCHHCCCCEEEHHHHHHHHHHCCCCCCEEEEECHHHHCCCCCCCEECCCHHHHHC DGRLTLENGTLAGADLDLLTAVRNMVLWGAASEEVALAMATSIPADLCAAACNVGRLEEG CCCEEEECCEECCCCHHHHHHHHHHHEECCCCCCEEEEHHHCCCHHHHHHHHCCCCCCCC AKADILHLMPGQTTCAAIWQSGRQIV CCCCEEEECCCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9301118; 10952301 [H]