Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89053822
Identifier: 89053822
GI number: 89053822
Start: 1295294
End: 1295743
Strand: Direct
Name: 89053822
Synonym: Jann_1331
Alternate gene names: NA
Gene position: 1295294-1295743 (Clockwise)
Preceding gene: 89053821
Following gene: 89053823
Centisome position: 30.0
GC content: 60.0
Gene sequence:
>450_bases ATGGCACCCCATGAGGGGCAGGGTCTGTCCCGGTTCGCGCCGTATCTGATGAACCGCATCGCGCATCGCTACAATCAGAA CCTGCATGCGTCCGTCACGGGTATAGGTCTGACCGTGCCGAAGATGCGCGTTCTGGCAGCGCTTGCTGCCATGGGGGAGC TGACGATCAATGACCTGTCCGTCGTTGCGATCTCTGAGCAGTCGACGATGAGCAGGACCCTGGACCAGATGGAGCGGGAG GGCCTGATCGAACGCAAGGTCAGCGAGAAGGACAGTCGGGTCAGGCTTGTCGACCTGACACCTGCGGGGTTGTCCGCCTA TCGTACGGTTTGGCCTGAAATGAGCGCAGCGGAAGAAGCCCTGTTCACGGGTCTGTCGGACACGCAGCGCGAGGATTTTC TGGATACCCTGTCGCAGATCCTGCTGAATATCCGGCAGAACGAGTTGTAG
Upstream 100 bases:
>100_bases GTCCCCTGTTCCGTGGGCTGGACGACTTCCATGCGCTTTCATATGTGTAAGGTGTCTGGATGGTGGGGAGGCGAGCGTGA CGGAGGAAGAGGGCGAGCCA
Downstream 100 bases:
>100_bases TTTATCGTTTGACTTGACCGCTTTCGGCAATGTATGCAAATGCATATATCAACAGGCGAGGGCAGGGCCGTGGCAGAACG TTCCTTTGCGAAAGAAGTCC
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Regulator MarR Family; TRANSCRIPTIONal REGULATOR MarR Family; Transcriptional Regulatory Protein; Transcriptional Regulator TrmB; Transcription Regulator Protein
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MAPHEGQGLSRFAPYLMNRIAHRYNQNLHASVTGIGLTVPKMRVLAALAAMGELTINDLSVVAISEQSTMSRTLDQMERE GLIERKVSEKDSRVRLVDLTPAGLSAYRTVWPEMSAAEEALFTGLSDTQREDFLDTLSQILLNIRQNEL
Sequences:
>Translated_149_residues MAPHEGQGLSRFAPYLMNRIAHRYNQNLHASVTGIGLTVPKMRVLAALAAMGELTINDLSVVAISEQSTMSRTLDQMERE GLIERKVSEKDSRVRLVDLTPAGLSAYRTVWPEMSAAEEALFTGLSDTQREDFLDTLSQILLNIRQNEL >Mature_148_residues APHEGQGLSRFAPYLMNRIAHRYNQNLHASVTGIGLTVPKMRVLAALAAMGELTINDLSVVAISEQSTMSRTLDQMEREG LIERKVSEKDSRVRLVDLTPAGLSAYRTVWPEMSAAEEALFTGLSDTQREDFLDTLSQILLNIRQNEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16601; Mature: 16470
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: PS00014 ER_TARGET ; PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPHEGQGLSRFAPYLMNRIAHRYNQNLHASVTGIGLTVPKMRVLAALAAMGELTINDLS CCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCEE VVAISEQSTMSRTLDQMEREGLIERKVSEKDSRVRLVDLTPAGLSAYRTVWPEMSAAEEA EEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHCCCHHHHHHH LFTGLSDTQREDFLDTLSQILLNIRQNEL HHCCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure APHEGQGLSRFAPYLMNRIAHRYNQNLHASVTGIGLTVPKMRVLAALAAMGELTINDLS CCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCEE VVAISEQSTMSRTLDQMEREGLIERKVSEKDSRVRLVDLTPAGLSAYRTVWPEMSAAEEA EEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHCCCHHHHHHH LFTGLSDTQREDFLDTLSQILLNIRQNEL HHCCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA