Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053822

Identifier: 89053822

GI number: 89053822

Start: 1295294

End: 1295743

Strand: Direct

Name: 89053822

Synonym: Jann_1331

Alternate gene names: NA

Gene position: 1295294-1295743 (Clockwise)

Preceding gene: 89053821

Following gene: 89053823

Centisome position: 30.0

GC content: 60.0

Gene sequence:

>450_bases
ATGGCACCCCATGAGGGGCAGGGTCTGTCCCGGTTCGCGCCGTATCTGATGAACCGCATCGCGCATCGCTACAATCAGAA
CCTGCATGCGTCCGTCACGGGTATAGGTCTGACCGTGCCGAAGATGCGCGTTCTGGCAGCGCTTGCTGCCATGGGGGAGC
TGACGATCAATGACCTGTCCGTCGTTGCGATCTCTGAGCAGTCGACGATGAGCAGGACCCTGGACCAGATGGAGCGGGAG
GGCCTGATCGAACGCAAGGTCAGCGAGAAGGACAGTCGGGTCAGGCTTGTCGACCTGACACCTGCGGGGTTGTCCGCCTA
TCGTACGGTTTGGCCTGAAATGAGCGCAGCGGAAGAAGCCCTGTTCACGGGTCTGTCGGACACGCAGCGCGAGGATTTTC
TGGATACCCTGTCGCAGATCCTGCTGAATATCCGGCAGAACGAGTTGTAG

Upstream 100 bases:

>100_bases
GTCCCCTGTTCCGTGGGCTGGACGACTTCCATGCGCTTTCATATGTGTAAGGTGTCTGGATGGTGGGGAGGCGAGCGTGA
CGGAGGAAGAGGGCGAGCCA

Downstream 100 bases:

>100_bases
TTTATCGTTTGACTTGACCGCTTTCGGCAATGTATGCAAATGCATATATCAACAGGCGAGGGCAGGGCCGTGGCAGAACG
TTCCTTTGCGAAAGAAGTCC

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator MarR Family; TRANSCRIPTIONal REGULATOR MarR Family; Transcriptional Regulatory Protein; Transcriptional Regulator TrmB; Transcription Regulator Protein

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MAPHEGQGLSRFAPYLMNRIAHRYNQNLHASVTGIGLTVPKMRVLAALAAMGELTINDLSVVAISEQSTMSRTLDQMERE
GLIERKVSEKDSRVRLVDLTPAGLSAYRTVWPEMSAAEEALFTGLSDTQREDFLDTLSQILLNIRQNEL

Sequences:

>Translated_149_residues
MAPHEGQGLSRFAPYLMNRIAHRYNQNLHASVTGIGLTVPKMRVLAALAAMGELTINDLSVVAISEQSTMSRTLDQMERE
GLIERKVSEKDSRVRLVDLTPAGLSAYRTVWPEMSAAEEALFTGLSDTQREDFLDTLSQILLNIRQNEL
>Mature_148_residues
APHEGQGLSRFAPYLMNRIAHRYNQNLHASVTGIGLTVPKMRVLAALAAMGELTINDLSVVAISEQSTMSRTLDQMEREG
LIERKVSEKDSRVRLVDLTPAGLSAYRTVWPEMSAAEEALFTGLSDTQREDFLDTLSQILLNIRQNEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16601; Mature: 16470

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: PS00014 ER_TARGET ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPHEGQGLSRFAPYLMNRIAHRYNQNLHASVTGIGLTVPKMRVLAALAAMGELTINDLS
CCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCEE
VVAISEQSTMSRTLDQMEREGLIERKVSEKDSRVRLVDLTPAGLSAYRTVWPEMSAAEEA
EEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHCCCHHHHHHH
LFTGLSDTQREDFLDTLSQILLNIRQNEL
HHCCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
APHEGQGLSRFAPYLMNRIAHRYNQNLHASVTGIGLTVPKMRVLAALAAMGELTINDLS
CCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCEE
VVAISEQSTMSRTLDQMEREGLIERKVSEKDSRVRLVDLTPAGLSAYRTVWPEMSAAEEA
EEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHCCCHHHHHHH
LFTGLSDTQREDFLDTLSQILLNIRQNEL
HHCCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA