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The map label for this gene is ycdK [C]

Identifier: 89053821

GI number: 89053821

Start: 1294788

End: 1295192

Strand: Direct

Name: ycdK [C]

Synonym: Jann_1330

Alternate gene names: 89053821

Gene position: 1294788-1295192 (Clockwise)

Preceding gene: 89053820

Following gene: 89053822

Centisome position: 29.99

GC content: 56.05

Gene sequence:

>405_bases
ATGACCAATAAAATAGTGCAACCTGAAGGATGGGCACCCGCGAAGGGCTATGCGAACGGAATGCTGGCACCCGATGGTAC
GCTCTATATCGGCGGTCAGATCGGCTGGACTGCGGATCAGGAGTTCGAGAGCCACGACTTCATCGGTCAGATGGAACAGG
CTCTGCGCAATATTGTAGATGTTGTGCAGGCAGCGGGCGGCGAGGTCGAGGATATCACCCGGCTGACGTGGTTCGTGATC
GACAAGAAGGAATACGCCGCGCGTCAACGGGAAGTTGGTGAAGTCTATCGACGCGTGTTGGGGCGTCATTTTCCGGCGAT
GTCCATGTTGATCGTGGCAGGCTTGGTTGAAGACGACGCTTTGCTTGAGATTGAGGCAACGGCTTACATCGCCCCACCTG
GCTAA

Upstream 100 bases:

>100_bases
CGGCAACCTCGACCCTTGTGAATATCGACGGCAACGGGCGACCAGACCCATGGCCTGATGCCATTCGAACAGCGATAATC
CCCTACCTTCGGAGCGAATG

Downstream 100 bases:

>100_bases
GGTCCCCTGTTCCGTGGGCTGGACGACTTCCATGCGCTTTCATATGTGTAAGGTGTCTGGATGGTGGGGAGGCGAGCGTG
ACGGAGGAAGAGGGCGAGCC

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: Endoribonuclease L-PSP Family Protein; Endoribonuclease; Translation Initiation Inhibitor; Pyrimidine Utilization Protein C; Aerobic 2-Aminobenzoate Metabolism Related Protein; Translational Inhibitor; Endoribonuclease Translation Initiation Inhibitor; Endoribonuclease L-PSP Superfamily

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MTNKIVQPEGWAPAKGYANGMLAPDGTLYIGGQIGWTADQEFESHDFIGQMEQALRNIVDVVQAAGGEVEDITRLTWFVI
DKKEYAARQREVGEVYRRVLGRHFPAMSMLIVAGLVEDDALLEIEATAYIAPPG

Sequences:

>Translated_134_residues
MTNKIVQPEGWAPAKGYANGMLAPDGTLYIGGQIGWTADQEFESHDFIGQMEQALRNIVDVVQAAGGEVEDITRLTWFVI
DKKEYAARQREVGEVYRRVLGRHFPAMSMLIVAGLVEDDALLEIEATAYIAPPG
>Mature_133_residues
TNKIVQPEGWAPAKGYANGMLAPDGTLYIGGQIGWTADQEFESHDFIGQMEQALRNIVDVVQAAGGEVEDITRLTWFVID
KKEYAARQREVGEVYRRVLGRHFPAMSMLIVAGLVEDDALLEIEATAYIAPPG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14767; Mature: 14636

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNKIVQPEGWAPAKGYANGMLAPDGTLYIGGQIGWTADQEFESHDFIGQMEQALRNIVD
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCEECCCCCCCCCCHHHHHHHHHHHHHHHH
VVQAAGGEVEDITRLTWFVIDKKEYAARQREVGEVYRRVLGRHFPAMSMLIVAGLVEDDA
HHHHCCCCHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC
LLEIEATAYIAPPG
EEEEEEEEEECCCC
>Mature Secondary Structure 
TNKIVQPEGWAPAKGYANGMLAPDGTLYIGGQIGWTADQEFESHDFIGQMEQALRNIVD
CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCEECCCCCCCCCCHHHHHHHHHHHHHHHH
VVQAAGGEVEDITRLTWFVIDKKEYAARQREVGEVYRRVLGRHFPAMSMLIVAGLVEDDA
HHHHCCCCHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC
LLEIEATAYIAPPG
EEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA