| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is iorA [H]
Identifier: 89053823
GI number: 89053823
Start: 1295777
End: 1297969
Strand: Direct
Name: iorA [H]
Synonym: Jann_1332
Alternate gene names: 89053823
Gene position: 1295777-1297969 (Clockwise)
Preceding gene: 89053822
Following gene: 89053824
Centisome position: 30.01
GC content: 60.65
Gene sequence:
>2193_bases ATGCAAATGCATATATCAACAGGCGAGGGCAGGGCCGTGGCAGAACGTTCCTTTGCGAAAGAAGTCCAGCACCTCAGGAT CGGCGAGGGGGAGGTCTTTCGCGGTGAGGGTATTTTGGCCATCACGAAGGCTCTGCTGGAAAATGGCGTGGGCTATGTCG CGGGGTATCAGGGTTCACCGATCTCCCATTTGATGGACGTGCTGGCCGACGCCCAGGATATTCTGGCGGAGATGGGCATT CATTTTGAAGCCTCCGCGTCTGAGGCCACGGCCGCCGCGACCCTGGCGGCGTCCGTTCACTACCCGATCCGTGGCGCCGT GACGTTCAAATCCACCGTCGGCACGAACGTCGCCTCGGACGCGCTGGCCAACCTGGCGTCTGGCGGTGTGACGGGCGGCG CGCTTGTGATCGTGGGGGAGGATTACGGCGAAGGGTCCTCCATCATGCAGGAACGCAGCCATGCGTTTGCGATGAAAAGT CAGATCTGGCTGCTGGATCCGCGCCCCAATCTGACGTCGATGGTCAAGGCTGTGGGCGACGGGTTCGCGCTGTCTGAGGC GTCAAACAGTCCTGTCATGCTGCAAATGCGGGTGAAATCCTGTCACCTGCTGGGAGAGTTCATCGCGAAGGACAACGTTC CGCCGTCCATGACGGTCAAAGATGCCTTGGAAAACCCACGGCGCGACATAGACCGGATCGTGCTGCCGCCCGCCTCGTTC CTGCATGAGCAGGAGAAGGTCACCAAGCGCCTTCCCGCAGCCATCGACTACATCCGCGCGAACACGCTGAATGAACGGTT TGGGCCGGTGCAGGGGAAGGTCGGGATCGTCTGCCAGGGCGGCCTTTACAACGGTGTGATCCGCGCACTTCAGCGCCTTG GGCTGGCGAATATCTATGGTGATTGTGACGTGCCATTGCATGTCCTGAATGTGACCTACCCGCTTGTGGATGATGAGGTG CTTGAGTTTGCCCGGGGCAAGGATAGCATTCTAGTCATTGAAGAAGGCCATCCCGCTTATACCGAGCAGAATATCCGCGC GATCCTGCACAAGGCGGGGGCTCGCTGCGCGGTGGACGGCAAGGGGCCGTTCCCGGAGGCTGGCGAATTGACCGGGCCGG TGATGCTTGATGGGGTATCGAGGTTTCTCCGGGATGCAGCGCCTGATCTCATGCCAGCCGTGGCCCGTGCGCCCAATGCG CCGCCCACGCTGAAATTGCCGGAACTTGCCGACACGGTCCCCGCCCGCCCGCCGAGCTTTTGCGTCGGTTGCCCGGAGCG CCCGATCTTCGCGGCCACCAAATTGATCGAACAGGAACTCGGACCCCACCACATTGCCAGCGACATCGGCTGCCACCTGT TCTCCATCAACGCGCCGTTCGACCTGGGGGCGACGACGATGGGCTACGGCCTTGGGCCCGCCTCGGCAGCCGCATTCAAT GACAAGACGGCGGGGCGGCGGTCGATCTCGTTTCTGGGCGATGGCGGATTCTGGCACAATGGATTGACCTCTTCGATCGG CAACGCCGTGTTCAACGACAATGACGGCGTGATCATCATCGTCGACAACTATTATTCGGCGGCGACGGGGGGGCAGGATA TTCTGTCGTCTCGGGCCGACAACACATCGAAATCAACCAAGCACCCGATCAAGCAGGCGGTCGAAGGGATGGGTGTCAAA TGGGTGCGGCAGCTGGATCGCACCTATGATGTGGGCAAGATGCAAGCGACGTTGAAGGAAGCGCTGGAAACACCGGAGAC CGGGCCAAAGGTCATCATCGCGTCGTCCGAGTGTATGTTGAACCGACAGCGGCGGGAGAAACCTTTGGCAAAAAAGGCAA TCGCGGACGGCAAGCGCGTGACGCGGACACGCTTTGGCGTGGATGAGGATGTGTGCACTGGTGATCATGCTTGCATCCGC CTGTCCGGCTGCCCGTCATTGTCACTGAAAACGCTTGAGGATCCGCTGCGGGATGATCCCGTGGCCAGTATCGATCAAAC CTGTGTGGGTTGCGGAAATTGCGGTGAAGTGGCGGATGCGGCCGTGCTGTGCCCATCATTCTATCAGGCCGATCTGATCC AGAACCCATCCAAACTGGACCGCATCCTCAGCACTTGGCGGCAGCGCCTGATTGCCAAGCTCCAAAAGCGCCGGGATGCG CGGCGGCTGGTCTTTTCAGGAGATGGAGCTTGA
Upstream 100 bases:
>100_bases GCAGCGCGAGGATTTTCTGGATACCCTGTCGCAGATCCTGCTGAATATCCGGCAGAACGAGTTGTAGTTTATCGTTTGAC TTGACCGCTTTCGGCAATGT
Downstream 100 bases:
>100_bases ACGCGCCAACCAAGATCAAGAGCGCGTCGGGTGAGATTATCAAACTCGCCGTGTTGGCCGTTGGCGGACAGGGTGGGGGC GTCCTTACCAATTGGATTGC
Product: thiamine pyrophosphate enzyme-like protein
Products: NA
Alternate protein names: IOR; Indolepyruvate ferredoxin oxidoreductase subunit alpha [H]
Number of amino acids: Translated: 730; Mature: 730
Protein sequence:
>730_residues MQMHISTGEGRAVAERSFAKEVQHLRIGEGEVFRGEGILAITKALLENGVGYVAGYQGSPISHLMDVLADAQDILAEMGI HFEASASEATAAATLAASVHYPIRGAVTFKSTVGTNVASDALANLASGGVTGGALVIVGEDYGEGSSIMQERSHAFAMKS QIWLLDPRPNLTSMVKAVGDGFALSEASNSPVMLQMRVKSCHLLGEFIAKDNVPPSMTVKDALENPRRDIDRIVLPPASF LHEQEKVTKRLPAAIDYIRANTLNERFGPVQGKVGIVCQGGLYNGVIRALQRLGLANIYGDCDVPLHVLNVTYPLVDDEV LEFARGKDSILVIEEGHPAYTEQNIRAILHKAGARCAVDGKGPFPEAGELTGPVMLDGVSRFLRDAAPDLMPAVARAPNA PPTLKLPELADTVPARPPSFCVGCPERPIFAATKLIEQELGPHHIASDIGCHLFSINAPFDLGATTMGYGLGPASAAAFN DKTAGRRSISFLGDGGFWHNGLTSSIGNAVFNDNDGVIIIVDNYYSAATGGQDILSSRADNTSKSTKHPIKQAVEGMGVK WVRQLDRTYDVGKMQATLKEALETPETGPKVIIASSECMLNRQRREKPLAKKAIADGKRVTRTRFGVDEDVCTGDHACIR LSGCPSLSLKTLEDPLRDDPVASIDQTCVGCGNCGEVADAAVLCPSFYQADLIQNPSKLDRILSTWRQRLIAKLQKRRDA RRLVFSGDGA
Sequences:
>Translated_730_residues MQMHISTGEGRAVAERSFAKEVQHLRIGEGEVFRGEGILAITKALLENGVGYVAGYQGSPISHLMDVLADAQDILAEMGI HFEASASEATAAATLAASVHYPIRGAVTFKSTVGTNVASDALANLASGGVTGGALVIVGEDYGEGSSIMQERSHAFAMKS QIWLLDPRPNLTSMVKAVGDGFALSEASNSPVMLQMRVKSCHLLGEFIAKDNVPPSMTVKDALENPRRDIDRIVLPPASF LHEQEKVTKRLPAAIDYIRANTLNERFGPVQGKVGIVCQGGLYNGVIRALQRLGLANIYGDCDVPLHVLNVTYPLVDDEV LEFARGKDSILVIEEGHPAYTEQNIRAILHKAGARCAVDGKGPFPEAGELTGPVMLDGVSRFLRDAAPDLMPAVARAPNA PPTLKLPELADTVPARPPSFCVGCPERPIFAATKLIEQELGPHHIASDIGCHLFSINAPFDLGATTMGYGLGPASAAAFN DKTAGRRSISFLGDGGFWHNGLTSSIGNAVFNDNDGVIIIVDNYYSAATGGQDILSSRADNTSKSTKHPIKQAVEGMGVK WVRQLDRTYDVGKMQATLKEALETPETGPKVIIASSECMLNRQRREKPLAKKAIADGKRVTRTRFGVDEDVCTGDHACIR LSGCPSLSLKTLEDPLRDDPVASIDQTCVGCGNCGEVADAAVLCPSFYQADLIQNPSKLDRILSTWRQRLIAKLQKRRDA RRLVFSGDGA >Mature_730_residues MQMHISTGEGRAVAERSFAKEVQHLRIGEGEVFRGEGILAITKALLENGVGYVAGYQGSPISHLMDVLADAQDILAEMGI HFEASASEATAAATLAASVHYPIRGAVTFKSTVGTNVASDALANLASGGVTGGALVIVGEDYGEGSSIMQERSHAFAMKS QIWLLDPRPNLTSMVKAVGDGFALSEASNSPVMLQMRVKSCHLLGEFIAKDNVPPSMTVKDALENPRRDIDRIVLPPASF LHEQEKVTKRLPAAIDYIRANTLNERFGPVQGKVGIVCQGGLYNGVIRALQRLGLANIYGDCDVPLHVLNVTYPLVDDEV LEFARGKDSILVIEEGHPAYTEQNIRAILHKAGARCAVDGKGPFPEAGELTGPVMLDGVSRFLRDAAPDLMPAVARAPNA PPTLKLPELADTVPARPPSFCVGCPERPIFAATKLIEQELGPHHIASDIGCHLFSINAPFDLGATTMGYGLGPASAAAFN DKTAGRRSISFLGDGGFWHNGLTSSIGNAVFNDNDGVIIIVDNYYSAATGGQDILSSRADNTSKSTKHPIKQAVEGMGVK WVRQLDRTYDVGKMQATLKEALETPETGPKVIIASSECMLNRQRREKPLAKKAIADGKRVTRTRFGVDEDVCTGDHACIR LSGCPSLSLKTLEDPLRDDPVASIDQTCVGCGNCGEVADAAVLCPSFYQADLIQNPSKLDRILSTWRQRLIAKLQKRRDA RRLVFSGDGA
Specific function: Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates [H]
COG id: COG4231
COG function: function code C; Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR017721 - InterPro: IPR002880 - InterPro: IPR011766 - InterPro: IPR009014 [H]
Pfam domain/function: PF01855 POR_N; PF02775 TPP_enzyme_C [H]
EC number: =1.2.7.8 [H]
Molecular weight: Translated: 78152; Mature: 78152
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQMHISTGEGRAVAERSFAKEVQHLRIGEGEVFRGEGILAITKALLENGVGYVAGYQGSP CEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHCCCCEEECCCCCC ISHLMDVLADAQDILAEMGIHFEASASEATAAATLAASVHYPIRGAVTFKSTVGTNVASD HHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHCCCCCCEEEEEHHHHCCCHHHH ALANLASGGVTGGALVIVGEDYGEGSSIMQERSHAFAMKSQIWLLDPRPNLTSMVKAVGD HHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHCC GFALSEASNSPVMLQMRVKSCHLLGEFIAKDNVPPSMTVKDALENPRRDIDRIVLPPASF CCEECCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHEEECCCHHH LHEQEKVTKRLPAAIDYIRANTLNERFGPVQGKVGIVCQGGLYNGVIRALQRLGLANIYG HHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCHHHCC DCDVPLHVLNVTYPLVDDEVLEFARGKDSILVIEEGHPAYTEQNIRAILHKAGARCAVDG CCCCCEEEEEEECCCCCHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEECC KGPFPEAGELTGPVMLDGVSRFLRDAAPDLMPAVARAPNAPPTLKLPELADTVPARPPSF CCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCC CVGCPERPIFAATKLIEQELGPHHIASDIGCHLFSINAPFDLGATTMGYGLGPASAAAFN CCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCEEEEECCCCCCCCHHHCCCCCCCHHHCCC DKTAGRRSISFLGDGGFWHNGLTSSIGNAVFNDNDGVIIIVDNYYSAATGGQDILSSRAD CCCCCCCEEEEEECCCCCCCCHHHHHCCCEEECCCCEEEEEECCCCCCCCCHHHHHHCCC NTSKSTKHPIKQAVEGMGVKWVRQLDRTYDVGKMQATLKEALETPETGPKVIIASSECML CCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEECCHHHH NRQRREKPLAKKAIADGKRVTRTRFGVDEDVCTGDHACIRLSGCPSLSLKTLEDPLRDDP HHHHHHCHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHHCCCCCCC VASIDQTCVGCGNCGEVADAAVLCPSFYQADLIQNPSKLDRILSTWRQRLIAKLQKRRDA CHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH RRLVFSGDGA HEEEECCCCC >Mature Secondary Structure MQMHISTGEGRAVAERSFAKEVQHLRIGEGEVFRGEGILAITKALLENGVGYVAGYQGSP CEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHCCCCEEECCCCCC ISHLMDVLADAQDILAEMGIHFEASASEATAAATLAASVHYPIRGAVTFKSTVGTNVASD HHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHCCCCCCEEEEEHHHHCCCHHHH ALANLASGGVTGGALVIVGEDYGEGSSIMQERSHAFAMKSQIWLLDPRPNLTSMVKAVGD HHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHCC GFALSEASNSPVMLQMRVKSCHLLGEFIAKDNVPPSMTVKDALENPRRDIDRIVLPPASF CCEECCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHEEECCCHHH LHEQEKVTKRLPAAIDYIRANTLNERFGPVQGKVGIVCQGGLYNGVIRALQRLGLANIYG HHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCHHHCC DCDVPLHVLNVTYPLVDDEVLEFARGKDSILVIEEGHPAYTEQNIRAILHKAGARCAVDG CCCCCEEEEEEECCCCCHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEECC KGPFPEAGELTGPVMLDGVSRFLRDAAPDLMPAVARAPNAPPTLKLPELADTVPARPPSF CCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCC CVGCPERPIFAATKLIEQELGPHHIASDIGCHLFSINAPFDLGATTMGYGLGPASAAAFN CCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCEEEEECCCCCCCCHHHCCCCCCCHHHCCC DKTAGRRSISFLGDGGFWHNGLTSSIGNAVFNDNDGVIIIVDNYYSAATGGQDILSSRAD CCCCCCCEEEEEECCCCCCCCHHHHHCCCEEECCCCEEEEEECCCCCCCCCHHHHHHCCC NTSKSTKHPIKQAVEGMGVKWVRQLDRTYDVGKMQATLKEALETPETGPKVIIASSECML CCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEECCHHHH NRQRREKPLAKKAIADGKRVTRTRFGVDEDVCTGDHACIRLSGCPSLSLKTLEDPLRDDP HHHHHHCHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHHCCCCCCC VASIDQTCVGCGNCGEVADAAVLCPSFYQADLIQNPSKLDRILSTWRQRLIAKLQKRRDA CHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH RRLVFSGDGA HEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]