Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053677

Identifier: 89053677

GI number: 89053677

Start: 1148466

End: 1149059

Strand: Direct

Name: 89053677

Synonym: Jann_1186

Alternate gene names: NA

Gene position: 1148466-1149059 (Clockwise)

Preceding gene: 89053676

Following gene: 89053678

Centisome position: 26.6

GC content: 57.24

Gene sequence:

>594_bases
ATGCTGCGCTCGCTCATCATATTGGCTCTATTGAACGGTGGGGGTCCTGCTAGCGCTGAGGCGCCTGAATGGGGTGTGCC
GCAGCCGTCTCAACTGCAAGTAGCTGCCGACCGCCTGTGTCCAGACGAGGCCGCAATACTTGCCGACGTGCTACCTTCGT
TTTGGGAAAACTATCTCGCGGCCAATCCGCGTACAGCAGGTCCACTCGATGGAAACACGCTCGAGGCTATGGTGACGTTT
GCGGCGCTTGGTGAGTCCTTAGGCGCAATGGTCCAATATGGTCAAACTCTGCCGCTTCAGCCTGGCGTAAACGAGGACAT
GGTGAACCGGTCCCATGCGGTGTATTCAGGGACCGTTGAACTCGCGCGGTGTTTGGCCCCTGACGCGGCCGCCGTAGAGG
CGCGCGCGGAATATGTGCCGGATCAGATGCGACCTCTCTTTGATGCGGCGTTCGCGTTCATGAACTGCGTTGATTTCTTT
GAACTGCATGACGCGCTTTTAGCCTTCGAGCCGAGTTTTCTGACCCGCGCAAACGTGCATCTCGTTGAGGGTGTTGTGAA
CAACATCGTAACCCCATGTGTGGAGTTCCTATGA

Upstream 100 bases:

>100_bases
TCTTCCTGCCGTTCTCATTGTTCTGGGTCGTGTTCGTGGCCTTTATGGCGCGCTACGAAGTGCTTGGCGGCTTCTGGGCC
CGCTTTGCGGTGGGGGGCTG

Downstream 100 bases:

>100_bases
CGCAGATCGACTACACCCGCGCCGCGAAATATTTCCTGCTGGCGGACTTTTTCAAAGGCTTCAAGCTGGGGATGAAGTAC
TTCTTCGCCCCCAAGGTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MLRSLIILALLNGGGPASAEAPEWGVPQPSQLQVAADRLCPDEAAILADVLPSFWENYLAANPRTAGPLDGNTLEAMVTF
AALGESLGAMVQYGQTLPLQPGVNEDMVNRSHAVYSGTVELARCLAPDAAAVEARAEYVPDQMRPLFDAAFAFMNCVDFF
ELHDALLAFEPSFLTRANVHLVEGVVNNIVTPCVEFL

Sequences:

>Translated_197_residues
MLRSLIILALLNGGGPASAEAPEWGVPQPSQLQVAADRLCPDEAAILADVLPSFWENYLAANPRTAGPLDGNTLEAMVTF
AALGESLGAMVQYGQTLPLQPGVNEDMVNRSHAVYSGTVELARCLAPDAAAVEARAEYVPDQMRPLFDAAFAFMNCVDFF
ELHDALLAFEPSFLTRANVHLVEGVVNNIVTPCVEFL
>Mature_197_residues
MLRSLIILALLNGGGPASAEAPEWGVPQPSQLQVAADRLCPDEAAILADVLPSFWENYLAANPRTAGPLDGNTLEAMVTF
AALGESLGAMVQYGQTLPLQPGVNEDMVNRSHAVYSGTVELARCLAPDAAAVEARAEYVPDQMRPLFDAAFAFMNCVDFF
ELHDALLAFEPSFLTRANVHLVEGVVNNIVTPCVEFL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21116; Mature: 21116

Theoretical pI: Translated: 3.97; Mature: 3.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRSLIILALLNGGGPASAEAPEWGVPQPSQLQVAADRLCPDEAAILADVLPSFWENYLA
CHHHHEEHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
ANPRTAGPLDGNTLEAMVTFAALGESLGAMVQYGQTLPLQPGVNEDMVNRSHAVYSGTVE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHH
LARCLAPDAAAVEARAEYVPDQMRPLFDAAFAFMNCVDFFELHDALLAFEPSFLTRANVH
HHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LVEGVVNNIVTPCVEFL
HHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MLRSLIILALLNGGGPASAEAPEWGVPQPSQLQVAADRLCPDEAAILADVLPSFWENYLA
CHHHHEEHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
ANPRTAGPLDGNTLEAMVTFAALGESLGAMVQYGQTLPLQPGVNEDMVNRSHAVYSGTVE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHH
LARCLAPDAAAVEARAEYVPDQMRPLFDAAFAFMNCVDFFELHDALLAFEPSFLTRANVH
HHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LVEGVVNNIVTPCVEFL
HHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA