Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053665

Identifier: 89053665

GI number: 89053665

Start: 1137918

End: 1138328

Strand: Direct

Name: 89053665

Synonym: Jann_1174

Alternate gene names: NA

Gene position: 1137918-1138328 (Clockwise)

Preceding gene: 89053664

Following gene: 89053666

Centisome position: 26.35

GC content: 65.94

Gene sequence:

>411_bases
GTGATACGATTTTCCCACCTCCTCCTCGCTTCGCTCCTCGCAGGTTTGCCGGGTTGGGCCGCCGCCCAGGCGGTTACGCC
CACCGATCATCCCGGCTTCGTATTGGCCGAGGCCATCGCCGTGCAGGGGTGCTCGCTGCATCAGGATGATGTGAATGCTC
TTCTGGGCGATCTGGGGCTTGAACCGCCGCAATTTCCGCAGATGGCGGTGCCGTTGATGCGGGACGGATATCTGATGCCT
GGCGGGGAAGGGCGATTGCAGCTGGTGAATTGGGGGCTGTGCATCGGCGACGAACCGGACGAGGCGGAGAATGGCGGCGC
GGCTGCCGCGACCGCGCCGGCGGCGACCGACGCCCAACCGGATGACGAGGCCCAACCGGATGACGAGACCACAGAGGCGG
CGACCGAGTAA

Upstream 100 bases:

>100_bases
GCAGCGAGATTTGGGGCAGGGGACCGGTGGGTTGCCTGCCCTTTTTCGTGGGCGGTGGCGTGGTAGGGTCTGGCCGACCA
CAATCCAAGGACGCTTCGCT

Downstream 100 bases:

>100_bases
GCTACGGAATCCCTCCGTTGTGACGGGGGCGCTGTCGGGTCAGGTTGATGTGACAACGACATTGCACCACCCGCTGATCG
GAGATGCTACCCCCTTCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MIRFSHLLLASLLAGLPGWAAAQAVTPTDHPGFVLAEAIAVQGCSLHQDDVNALLGDLGLEPPQFPQMAVPLMRDGYLMP
GGEGRLQLVNWGLCIGDEPDEAENGGAAAATAPAATDAQPDDEAQPDDETTEAATE

Sequences:

>Translated_136_residues
MIRFSHLLLASLLAGLPGWAAAQAVTPTDHPGFVLAEAIAVQGCSLHQDDVNALLGDLGLEPPQFPQMAVPLMRDGYLMP
GGEGRLQLVNWGLCIGDEPDEAENGGAAAATAPAATDAQPDDEAQPDDETTEAATE
>Mature_136_residues
MIRFSHLLLASLLAGLPGWAAAQAVTPTDHPGFVLAEAIAVQGCSLHQDDVNALLGDLGLEPPQFPQMAVPLMRDGYLMP
GGEGRLQLVNWGLCIGDEPDEAENGGAAAATAPAATDAQPDDEAQPDDETTEAATE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14072; Mature: 14072

Theoretical pI: Translated: 3.61; Mature: 3.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRFSHLLLASLLAGLPGWAAAQAVTPTDHPGFVLAEAIAVQGCSLHQDDVNALLGDLGL
CCCHHHHHHHHHHHCCCCCHHCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCC
EPPQFPQMAVPLMRDGYLMPGGEGRLQLVNWGLCIGDEPDEAENGGAAAATAPAATDAQP
CCCCCCCHHCHHHHCCEECCCCCCEEEEEEECEEECCCCCCCCCCCCCCCCCCCCCCCCC
DDEAQPDDETTEAATE
CCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIRFSHLLLASLLAGLPGWAAAQAVTPTDHPGFVLAEAIAVQGCSLHQDDVNALLGDLGL
CCCHHHHHHHHHHHCCCCCHHCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCC
EPPQFPQMAVPLMRDGYLMPGGEGRLQLVNWGLCIGDEPDEAENGGAAAATAPAATDAQP
CCCCCCCHHCHHHHCCEECCCCCCEEEEEEECEEECCCCCCCCCCCCCCCCCCCCCCCCC
DDEAQPDDETTEAATE
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA