Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053666

Identifier: 89053666

GI number: 89053666

Start: 1138651

End: 1139481

Strand: Direct

Name: 89053666

Synonym: Jann_1175

Alternate gene names: NA

Gene position: 1138651-1139481 (Clockwise)

Preceding gene: 89053665

Following gene: 89053667

Centisome position: 26.37

GC content: 64.62

Gene sequence:

>831_bases
ATGTTCCGACCCTTGTTTTGTGCCGCCGCTCTGGCTCTTGCGACGCCCATTTCCGCCCAATCGACGGAGGCGTTGGCCAT
GATGGCGGCGATCGAGGGTCTTGGCTGCACGGTCACCAGCGACAACGAAGCCGCGTTGCTGCAGGCGCTTGATATGAGCA
CGGCGGCGCTGGAAACGGTGGGCAACGAGTTGCTGGATGCCGGAATTATACAAGTGCGCGACAACACCCTTGTCATGACC
GGCGGGGCCTGTGCCGGTGTGACCGAGGCCGCCGCACCCGCCCCGGCCACCCTTGTGGCAACGATGATTGCCCTGCGCGA
CAATGGGTGCACGGTGTCCGAGGCGGGGGCCGATGCCTTGCTGTCGCCGTTGGGACCGCGCGAGGTGATCATGGGTCATT
TGCGGGACCTTGACGACACCAATTTCGTGCACATCAGCCGCGATTTAGGCGGGGTCGTGACGGCGGAGCGTGTGTGCAGC
GCGTCCGATGAGGTCATAGCCTCCTTCGCGTCGCAGGTGGCAGATATGCTGGAGTTGCCCGAGCTCAGTCGCCTGGGCTT
CGTCGCCAGCCGTCCCGGGGCCAGGATGCTTTTTGTGGAGTGGATCGCGGCGCAGGGGTGCGAAATCGCCCATGCCGATT
CCACCCAAGGTATGCAGCACCTGGGCTTTGAGAATACGCTGGCGTCCGTTGTTGTGCCATTGCTGGACGGTGGCGTTCTG
GAAAGTGGCGCGACGGGTCTGGTGTTGCCGGCTGACCTGTGCGCAGGGTCGGCGGCGGATCGCCAGGTTGCGGTTGCGGC
ATTGCCGCCTGAGGACGCGGCGTCCGAGTGA

Upstream 100 bases:

>100_bases
AGGGGTCCGGCCCGGGCGAGGGCGTCTTTCTTGCATTGCGTCAAGAAAGACGCCCTACTTATGTCAATCAATCAGCTTCT
CTGACCCTTCAGGATATTTC

Downstream 100 bases:

>100_bases
GGGCGCGGTCCGTGTGAGGGGGTCACCGTCTCTGCGCCTGCGCCATAGCGCGCATGGACATCCGCCCGCGTTTGCGCGAA
ACCTCCCGCGACAGTTGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MFRPLFCAAALALATPISAQSTEALAMMAAIEGLGCTVTSDNEAALLQALDMSTAALETVGNELLDAGIIQVRDNTLVMT
GGACAGVTEAAAPAPATLVATMIALRDNGCTVSEAGADALLSPLGPREVIMGHLRDLDDTNFVHISRDLGGVVTAERVCS
ASDEVIASFASQVADMLELPELSRLGFVASRPGARMLFVEWIAAQGCEIAHADSTQGMQHLGFENTLASVVVPLLDGGVL
ESGATGLVLPADLCAGSAADRQVAVAALPPEDAASE

Sequences:

>Translated_276_residues
MFRPLFCAAALALATPISAQSTEALAMMAAIEGLGCTVTSDNEAALLQALDMSTAALETVGNELLDAGIIQVRDNTLVMT
GGACAGVTEAAAPAPATLVATMIALRDNGCTVSEAGADALLSPLGPREVIMGHLRDLDDTNFVHISRDLGGVVTAERVCS
ASDEVIASFASQVADMLELPELSRLGFVASRPGARMLFVEWIAAQGCEIAHADSTQGMQHLGFENTLASVVVPLLDGGVL
ESGATGLVLPADLCAGSAADRQVAVAALPPEDAASE
>Mature_276_residues
MFRPLFCAAALALATPISAQSTEALAMMAAIEGLGCTVTSDNEAALLQALDMSTAALETVGNELLDAGIIQVRDNTLVMT
GGACAGVTEAAAPAPATLVATMIALRDNGCTVSEAGADALLSPLGPREVIMGHLRDLDDTNFVHISRDLGGVVTAERVCS
ASDEVIASFASQVADMLELPELSRLGFVASRPGARMLFVEWIAAQGCEIAHADSTQGMQHLGFENTLASVVVPLLDGGVL
ESGATGLVLPADLCAGSAADRQVAVAALPPEDAASE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28102; Mature: 28102

Theoretical pI: Translated: 3.89; Mature: 3.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRPLFCAAALALATPISAQSTEALAMMAAIEGLGCTVTSDNEAALLQALDMSTAALETV
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHH
GNELLDAGIIQVRDNTLVMTGGACAGVTEAAAPAPATLVATMIALRDNGCTVSEAGADAL
HHHHHHCCEEEEECCEEEEECCCCCCCHHHCCCCCHHHHHHHHHHCCCCCEECCCCCHHH
LSPLGPREVIMGHLRDLDDTNFVHISRDLGGVVTAERVCSASDEVIASFASQVADMLELP
HCCCCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
ELSRLGFVASRPGARMLFVEWIAAQGCEIAHADSTQGMQHLGFENTLASVVVPLLDGGVL
CHHHCCHHCCCCCCEEHHHHHHHHCCCCEEECCCCCCHHHCCHHHHHHHHHHHHHCCCEE
ESGATGLVLPADLCAGSAADRQVAVAALPPEDAASE
CCCCCCEEEEHHHHCCCCCCCEEEEEECCCCCCCCC
>Mature Secondary Structure
MFRPLFCAAALALATPISAQSTEALAMMAAIEGLGCTVTSDNEAALLQALDMSTAALETV
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHH
GNELLDAGIIQVRDNTLVMTGGACAGVTEAAAPAPATLVATMIALRDNGCTVSEAGADAL
HHHHHHCCEEEEECCEEEEECCCCCCCHHHCCCCCHHHHHHHHHHCCCCCEECCCCCHHH
LSPLGPREVIMGHLRDLDDTNFVHISRDLGGVVTAERVCSASDEVIASFASQVADMLELP
HCCCCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
ELSRLGFVASRPGARMLFVEWIAAQGCEIAHADSTQGMQHLGFENTLASVVVPLLDGGVL
CHHHCCHHCCCCCCEEHHHHHHHHCCCCEEECCCCCCHHHCCHHHHHHHHHHHHHCCCEE
ESGATGLVLPADLCAGSAADRQVAVAALPPEDAASE
CCCCCCEEEEHHHHCCCCCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA