Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053583

Identifier: 89053583

GI number: 89053583

Start: 1054714

End: 1055535

Strand: Direct

Name: 89053583

Synonym: Jann_1092

Alternate gene names: NA

Gene position: 1054714-1055535 (Clockwise)

Preceding gene: 89053582

Following gene: 89053586

Centisome position: 24.43

GC content: 41.61

Gene sequence:

>822_bases
ATGAGTGGAGATGGCAGCCTGGCAAGAAATAACTTTGCACTAGGTTTCTTGTCAGGCTCTCTATTTTCATTGTTTCTCCT
GCTGTTTTTAGATTTCTTTCAACTGTTGCCGTTTGCAGACTCTACTTTCACTGGAGCGATTCTAGGTGCCGTCTTAGCTG
GAGGAATTGGCATATCTGGACAATTCTTAGTCCTTTCCCAGAACGAACGACGTCTGAACCGAGAAGAAAAACGTGCTGAA
CGAGTTAAAATCGACTCACTGCTGAGTCGCATCAATCGTCTCAAAAGCACAATGTATCAAGTGCAACAGCATGTGGAATC
AAGGCGTGACTTTGACAATATTGTCTTTGATAACCTTCAGCCCTTGATGAAGCCTTTCAAAATAAATGACTTACCAGAAA
GGCTTGCAGAAGGTGATTTGACTTTGTCACTGCAGCTGGAGGATTATCGCCTTTTCAACTTAGTCAATGCTCTTGATAGT
ATCGTTGCTAATTTCAGGTGGACACAAGAAAGCTATGAGAAGGCTGTAGAGGGTTTTCTTGAAGGAATGCAGAAGAGCGG
GGATTTAAAATTTTCAGAAGGCCAATTTTCAGGCGTTGGAGAGATCAATTTGCCCGAATACCATGCGCTGACTGATTTGC
AGTCACATCATATTGAGTCTGTTTATTCAGGTCTTGTTGCCTCAAAAGAGGTTTTTGATATTCTACTTGAGCATTTGCAT
CGACGTCATGGTGTCAAGATTTTATTTTCTGACCCTATTAGTGATGAACAATGGGTGGATCTAAAAGATTCTGTAGACAT
GGGTGATATCGTTTCAGGTTAA

Upstream 100 bases:

>100_bases
GCGTTGAGGTGTTGAGGCGGCGTCTAGCCGGGGAAGAGGTGACGCAGGAGACGTCTGGGATGAGCAAGGGAGAATGGCGG
GAGTTCGAGGCGGTGTTTTA

Downstream 100 bases:

>100_bases
CCCAATTGGCTTTCGAGAGTCACGGTGCTCATCTGCGCTCTAAGCGAGGACGCCTTAAATCTATTCGTAGACATCTACAC
AGCAGAATAGAAAATTGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MSGDGSLARNNFALGFLSGSLFSLFLLLFLDFFQLLPFADSTFTGAILGAVLAGGIGISGQFLVLSQNERRLNREEKRAE
RVKIDSLLSRINRLKSTMYQVQQHVESRRDFDNIVFDNLQPLMKPFKINDLPERLAEGDLTLSLQLEDYRLFNLVNALDS
IVANFRWTQESYEKAVEGFLEGMQKSGDLKFSEGQFSGVGEINLPEYHALTDLQSHHIESVYSGLVASKEVFDILLEHLH
RRHGVKILFSDPISDEQWVDLKDSVDMGDIVSG

Sequences:

>Translated_273_residues
MSGDGSLARNNFALGFLSGSLFSLFLLLFLDFFQLLPFADSTFTGAILGAVLAGGIGISGQFLVLSQNERRLNREEKRAE
RVKIDSLLSRINRLKSTMYQVQQHVESRRDFDNIVFDNLQPLMKPFKINDLPERLAEGDLTLSLQLEDYRLFNLVNALDS
IVANFRWTQESYEKAVEGFLEGMQKSGDLKFSEGQFSGVGEINLPEYHALTDLQSHHIESVYSGLVASKEVFDILLEHLH
RRHGVKILFSDPISDEQWVDLKDSVDMGDIVSG
>Mature_272_residues
SGDGSLARNNFALGFLSGSLFSLFLLLFLDFFQLLPFADSTFTGAILGAVLAGGIGISGQFLVLSQNERRLNREEKRAER
VKIDSLLSRINRLKSTMYQVQQHVESRRDFDNIVFDNLQPLMKPFKINDLPERLAEGDLTLSLQLEDYRLFNLVNALDSI
VANFRWTQESYEKAVEGFLEGMQKSGDLKFSEGQFSGVGEINLPEYHALTDLQSHHIESVYSGLVASKEVFDILLEHLHR
RHGVKILFSDPISDEQWVDLKDSVDMGDIVSG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30793; Mature: 30662

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGDGSLARNNFALGFLSGSLFSLFLLLFLDFFQLLPFADSTFTGAILGAVLAGGIGISG
CCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC
QFLVLSQNERRLNREEKRAERVKIDSLLSRINRLKSTMYQVQQHVESRRDFDNIVFDNLQ
EEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLMKPFKINDLPERLAEGDLTLSLQLEDYRLFNLVNALDSIVANFRWTQESYEKAVEGFL
HHHCCCCCCHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
EGMQKSGDLKFSEGQFSGVGEINLPEYHALTDLQSHHIESVYSGLVASKEVFDILLEHLH
HHHHHCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRHGVKILFSDPISDEQWVDLKDSVDMGDIVSG
HHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SGDGSLARNNFALGFLSGSLFSLFLLLFLDFFQLLPFADSTFTGAILGAVLAGGIGISG
CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC
QFLVLSQNERRLNREEKRAERVKIDSLLSRINRLKSTMYQVQQHVESRRDFDNIVFDNLQ
EEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLMKPFKINDLPERLAEGDLTLSLQLEDYRLFNLVNALDSIVANFRWTQESYEKAVEGFL
HHHCCCCCCHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
EGMQKSGDLKFSEGQFSGVGEINLPEYHALTDLQSHHIESVYSGLVASKEVFDILLEHLH
HHHHHCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRHGVKILFSDPISDEQWVDLKDSVDMGDIVSG
HHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA