Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053536

Identifier: 89053536

GI number: 89053536

Start: 1000516

End: 1000839

Strand: Direct

Name: 89053536

Synonym: Jann_1045

Alternate gene names: NA

Gene position: 1000516-1000839 (Clockwise)

Preceding gene: 89053535

Following gene: 89053537

Centisome position: 23.17

GC content: 56.17

Gene sequence:

>324_bases
TTGCGATGGCTGCGCGCCGTTGGGGCTGAACGGGCCCTGATCTGTGCAAAAATGGAGGGTTCCGACACGCAATCCGCCAA
GAATCGCACGATTGGAGGCCTGAAAATGCACGGGCAAAGCGCCGCATCGCAGCAAGATACGTCTAAGGTGCTGATATGTA
TTGATTTTCAACCTAAGCGGAGGCTGGTCAGGATGGTTGCAGCATTGCAAACCCTCTGCTACACCGCGCTCGATTTACCG
GGGAACGGGCGGATGTATGCCGCCCTGACACGACCAGATACGGGATGGCACACAGCCTTTTCCGAGAGAATGTCGTGCAA
CTGA

Upstream 100 bases:

>100_bases
GATGGGTCCTGGTTGGGCCTGATGGCCACGTCGTCGCGCGACAAAAGTGTGATGGTGGAGAATGGCGATCTGGAGACCGC
GCGGCACTATGGCGCGCGCC

Downstream 100 bases:

>100_bases
AAGGGTTGATGTGAGCGAACCTGCTTCAATCTCGACCGGCATCGCCGCGCGCTATGCGACCGCGATGTTTGAGCTGGCCG
AGGAGGCCAAAGCGCTTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MRWLRAVGAERALICAKMEGSDTQSAKNRTIGGLKMHGQSAASQQDTSKVLICIDFQPKRRLVRMVAALQTLCYTALDLP
GNGRMYAALTRPDTGWHTAFSERMSCN

Sequences:

>Translated_107_residues
MRWLRAVGAERALICAKMEGSDTQSAKNRTIGGLKMHGQSAASQQDTSKVLICIDFQPKRRLVRMVAALQTLCYTALDLP
GNGRMYAALTRPDTGWHTAFSERMSCN
>Mature_107_residues
MRWLRAVGAERALICAKMEGSDTQSAKNRTIGGLKMHGQSAASQQDTSKVLICIDFQPKRRLVRMVAALQTLCYTALDLP
GNGRMYAALTRPDTGWHTAFSERMSCN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11833; Mature: 11833

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
9.3 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
9.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWLRAVGAERALICAKMEGSDTQSAKNRTIGGLKMHGQSAASQQDTSKVLICIDFQPKR
CCCHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEEECCHHH
RLVRMVAALQTLCYTALDLPGNGRMYAALTRPDTGWHTAFSERMSCN
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHCCCC
>Mature Secondary Structure
MRWLRAVGAERALICAKMEGSDTQSAKNRTIGGLKMHGQSAASQQDTSKVLICIDFQPKR
CCCHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEEECCHHH
RLVRMVAALQTLCYTALDLPGNGRMYAALTRPDTGWHTAFSERMSCN
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA