Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89053535
Identifier: 89053535
GI number: 89053535
Start: 1000008
End: 1000544
Strand: Direct
Name: 89053535
Synonym: Jann_1044
Alternate gene names: NA
Gene position: 1000008-1000544 (Clockwise)
Preceding gene: 89053534
Following gene: 89053536
Centisome position: 23.16
GC content: 65.55
Gene sequence:
>537_bases GTGATCTGCATCCCGTATTTCAGTGGCGCCGGGCACACCGCGTTACTGGCGCGCGCAATCGCGGAGGGTGCGCAGGAGGC GCATGTGATGGATATCACGACGTTGGCGACCAAGGATTGGGACGCGCTCGACCGGGCATCGGTGATTGTCTTTGGTGCGC CGACCTACATGGGATCAACCGCCGCGCGCTTTGATCAATTTCTGGAAGAGGCCGCCGCCACGCGCTGGGATACGGGCCGT TGGCGCGACAAGCTGGCCGGTGGGTTCACGGTCGCCAGCCACGGATCGGGCGACAAGGGCGTCGCCTTGCAGCGGATCAA CACCTATGCCGCACAGATGGGGATGGTCTGGGTCGGACAGGCCGAGATCGGCGCGCCGGTGAAACCGGACCGTGCGGGGA TCAACCGCGATGGGTCCTGGTTGGGCCTGATGGCCACGTCGTCGCGCGACAAAAGTGTGATGGTGGAGAATGGCGATCTG GAGACCGCGCGGCACTATGGCGCGCGCCTTGCGATGGCTGCGCGCCGTTGGGGCTGA
Upstream 100 bases:
>100_bases CGCGCCGCAAACCGGGGCTGGCCGAACGTGTTCGCCGCCCCCTGCGGGTGTTGGAGGGCAACCCGCAGCCCGTCGGCGTA TCCGGCATGAGAGGGCGGCG
Downstream 100 bases:
>100_bases ACGGGCCCTGATCTGTGCAAAAATGGAGGGTTCCGACACGCAATCCGCCAAGAATCGCACGATTGGAGGCCTGAAAATGC ACGGGCAAAGCGCCGCATCG
Product: tryptophan repressor binding protein
Products: NA
Alternate protein names: Multimeric Flavodoxin WrbA; NADPH-Dependent FMN Reductase; Flavodoxin; NADPH-Dependent Fmn Reductase; Multimeric Flavodoxin; Flavodoxin Domain-Containing Protein; Flavodoxin Protein; NADph-Dependent Fmn Reductase; Protein With Flavodoxin Fold; Flavodoxin WrbA-Like Protein
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MICIPYFSGAGHTALLARAIAEGAQEAHVMDITTLATKDWDALDRASVIVFGAPTYMGSTAARFDQFLEEAAATRWDTGR WRDKLAGGFTVASHGSGDKGVALQRINTYAAQMGMVWVGQAEIGAPVKPDRAGINRDGSWLGLMATSSRDKSVMVENGDL ETARHYGARLAMAARRWG
Sequences:
>Translated_178_residues MICIPYFSGAGHTALLARAIAEGAQEAHVMDITTLATKDWDALDRASVIVFGAPTYMGSTAARFDQFLEEAAATRWDTGR WRDKLAGGFTVASHGSGDKGVALQRINTYAAQMGMVWVGQAEIGAPVKPDRAGINRDGSWLGLMATSSRDKSVMVENGDL ETARHYGARLAMAARRWG >Mature_178_residues MICIPYFSGAGHTALLARAIAEGAQEAHVMDITTLATKDWDALDRASVIVFGAPTYMGSTAARFDQFLEEAAATRWDTGR WRDKLAGGFTVASHGSGDKGVALQRINTYAAQMGMVWVGQAEIGAPVKPDRAGINRDGSWLGLMATSSRDKSVMVENGDL ETARHYGARLAMAARRWG
Specific function: Unknown
COG id: COG0655
COG function: function code R; Multimeric flavodoxin WrbA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19121; Mature: 19121
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: PS50902 FLAVODOXIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MICIPYFSGAGHTALLARAIAEGAQEAHVMDITTLATKDWDALDRASVIVFGAPTYMGST CEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCHHCCCH AARFDQFLEEAAATRWDTGRWRDKLAGGFTVASHGSGDKGVALQRINTYAAQMGMVWVGQ HHHHHHHHHHHHHCCCCCCHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHCEEEECC AEIGAPVKPDRAGINRDGSWLGLMATSSRDKSVMVENGDLETARHYGARLAMAARRWG CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MICIPYFSGAGHTALLARAIAEGAQEAHVMDITTLATKDWDALDRASVIVFGAPTYMGST CEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCHHCCCH AARFDQFLEEAAATRWDTGRWRDKLAGGFTVASHGSGDKGVALQRINTYAAQMGMVWVGQ HHHHHHHHHHHHHCCCCCCHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHCEEEECC AEIGAPVKPDRAGINRDGSWLGLMATSSRDKSVMVENGDLETARHYGARLAMAARRWG CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA