Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053465

Identifier: 89053465

GI number: 89053465

Start: 929424

End: 930725

Strand: Direct

Name: 89053465

Synonym: Jann_0974

Alternate gene names: NA

Gene position: 929424-930725 (Clockwise)

Preceding gene: 89053464

Following gene: 89053466

Centisome position: 21.52

GC content: 68.74

Gene sequence:

>1302_bases
ATGATCCGGTTTGCCCTTCTTTTCAGCGTTTTGGCCGCTCCTGCGGTGGCCCAGACCGCCCCCGATGATCGACCGGGGCG
CTGGATCGCCGCCCCCGCGCCGCAGGGGGATGTGTTGCAGGCACCGGCCTCGGGGCCGCTGATCACAACCGAACCCGCGC
CGCATATCGTCCTGACGCCGCCCGAGCCCGCCTCGGTCATGGTTGCGCCTGCCGCAGCGCCCGACACGCAACCCGTGCCC
CGCCCCGACGCGACGGCCATTGCCGAGCCAGTCCCCGCGCAGGTCGTTGCAGAGCTGCAGACGGATCCCGTTTTGGCCGA
TCGTGCTCTCGTGGACCCCCCTTTGGTGGATCCCGCTTTGATCGCCCGGATTGAGGCTATCGTGTCGGACGAGGTCCTCG
ATCCCCAAGCCGAAGCACCCCATTCAGGCGGGGCTGCGCAGCCGCCCGACGTGCCCCCGATGCTCACCGTCGCGTTCAGG
CCATCTGCGCCGTCGGATCTGCCTGTTCGGGCGACAGAAGACCTCCTGCCAGCGCCCCCGCCTGACAGCGGACGGGACGC
GCAGCCTGTCCCACAGCCCGTTGCTGTCCTGATGCCGCCCCTTGAAACAACGCCGATCCTGCCGCGCCTGAGCCCGTCTG
GCCCCGCCGCGCAGGACATTGTCACCACATTCCCCCCGTCGCAGGCCGCGCGTCTTTCGGCGGTGCTGCTGCCGTCGCCC
GTGACGCCGACTGCGCCGCCGTTACACTTGGCCCGCGCCCCCGCGCCGGTTCGGGACCCGTTCCCGATGTCCGCCCTGCC
GCCCTCCGCGCTGCCGGAGGGTCCAGATACCCTCGGGCGCTTGATCCAACCTTTGCGTCCGTTGCCGGAAGCCAATGCGG
CGGTGCTGATCGGGCAACCTTCGGTGATCCCAGCGCGTCTGCCCGTCCCGACCCCATCCTTCACCCCATCCGCTGACCGT
CCCGCCCTGGACCCCGAGGCCCCAATCATTTTGCCTGAGCCCGATGCCCGCGCATTGGCGCGGATGATGGAGGATGCGAT
GATCTGCTGGCGCATGGCCGATCTTGATACGGAAGCGGGATGGGCGCGGTTGTCCGTGGATGTGGCGTTGGATGAAACCA
ATCGACCCTCCGCCGCCTCGATCCGGTTGACGGGCTTTGCTCATACCGTCTCGGGCGCGGCGGAAAGCGCCTACCGTGCC
GCCCATGCGGCGCTGACCGGTTGTGCGGAGGCGACGGAAAGCGCGCCCGCCACCGCATCGGCCACTCTTGTTTTTGATCG
CAGTGGGGTGCGTTTGCAATGA

Upstream 100 bases:

>100_bases
TCACGCGGTGTGCCAACGATGGCCTTGATCTGCCGCCCGAGACGTACCCTGTCTGGCAGAGGATCGAGCTTACCTTTGAT
CCGTTTGAGGGGCAGATGCG

Downstream 100 bases:

>100_bases
CCCCAGGCGCATCCTACGTATTTGCCCTTAGTTCAGGAGGTTTCCCATGTTGAACCGCCGCAATTTCATTCGCACAACCT
CGGCCCTTGCGGCCTCCACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MIRFALLFSVLAAPAVAQTAPDDRPGRWIAAPAPQGDVLQAPASGPLITTEPAPHIVLTPPEPASVMVAPAAAPDTQPVP
RPDATAIAEPVPAQVVAELQTDPVLADRALVDPPLVDPALIARIEAIVSDEVLDPQAEAPHSGGAAQPPDVPPMLTVAFR
PSAPSDLPVRATEDLLPAPPPDSGRDAQPVPQPVAVLMPPLETTPILPRLSPSGPAAQDIVTTFPPSQAARLSAVLLPSP
VTPTAPPLHLARAPAPVRDPFPMSALPPSALPEGPDTLGRLIQPLRPLPEANAAVLIGQPSVIPARLPVPTPSFTPSADR
PALDPEAPIILPEPDARALARMMEDAMICWRMADLDTEAGWARLSVDVALDETNRPSAASIRLTGFAHTVSGAAESAYRA
AHAALTGCAEATESAPATASATLVFDRSGVRLQ

Sequences:

>Translated_433_residues
MIRFALLFSVLAAPAVAQTAPDDRPGRWIAAPAPQGDVLQAPASGPLITTEPAPHIVLTPPEPASVMVAPAAAPDTQPVP
RPDATAIAEPVPAQVVAELQTDPVLADRALVDPPLVDPALIARIEAIVSDEVLDPQAEAPHSGGAAQPPDVPPMLTVAFR
PSAPSDLPVRATEDLLPAPPPDSGRDAQPVPQPVAVLMPPLETTPILPRLSPSGPAAQDIVTTFPPSQAARLSAVLLPSP
VTPTAPPLHLARAPAPVRDPFPMSALPPSALPEGPDTLGRLIQPLRPLPEANAAVLIGQPSVIPARLPVPTPSFTPSADR
PALDPEAPIILPEPDARALARMMEDAMICWRMADLDTEAGWARLSVDVALDETNRPSAASIRLTGFAHTVSGAAESAYRA
AHAALTGCAEATESAPATASATLVFDRSGVRLQ
>Mature_433_residues
MIRFALLFSVLAAPAVAQTAPDDRPGRWIAAPAPQGDVLQAPASGPLITTEPAPHIVLTPPEPASVMVAPAAAPDTQPVP
RPDATAIAEPVPAQVVAELQTDPVLADRALVDPPLVDPALIARIEAIVSDEVLDPQAEAPHSGGAAQPPDVPPMLTVAFR
PSAPSDLPVRATEDLLPAPPPDSGRDAQPVPQPVAVLMPPLETTPILPRLSPSGPAAQDIVTTFPPSQAARLSAVLLPSP
VTPTAPPLHLARAPAPVRDPFPMSALPPSALPEGPDTLGRLIQPLRPLPEANAAVLIGQPSVIPARLPVPTPSFTPSADR
PALDPEAPIILPEPDARALARMMEDAMICWRMADLDTEAGWARLSVDVALDETNRPSAASIRLTGFAHTVSGAAESAYRA
AHAALTGCAEATESAPATASATLVFDRSGVRLQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44682; Mature: 44682

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRFALLFSVLAAPAVAQTAPDDRPGRWIAAPAPQGDVLQAPASGPLITTEPAPHIVLTP
CHHHHHHHHHHHCCHHHHCCCCCCCCCEEECCCCCCCEEECCCCCCEEEECCCCEEEECC
PEPASVMVAPAAAPDTQPVPRPDATAIAEPVPAQVVAELQTDPVLADRALVDPPLVDPAL
CCCCEEEEECCCCCCCCCCCCCCCHHHCCCCCHHHHHHHCCCCCHHHHHHCCCCCCCHHH
IARIEAIVSDEVLDPQAEAPHSGGAAQPPDVPPMLTVAFRPSAPSDLPVRATEDLLPAPP
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHCCCCCCC
PDSGRDAQPVPQPVAVLMPPLETTPILPRLSPSGPAAQDIVTTFPPSQAARLSAVLLPSP
CCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHEECCCCCHHHHEEEEEECCC
VTPTAPPLHLARAPAPVRDPFPMSALPPSALPEGPDTLGRLIQPLRPLPEANAAVLIGQP
CCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECC
SVIPARLPVPTPSFTPSADRPALDPEAPIILPEPDARALARMMEDAMICWRMADLDTEAG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCC
WARLSVDVALDETNRPSAASIRLTGFAHTVSGAAESAYRAAHAALTGCAEATESAPATAS
EEEEEEEEEECCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
ATLVFDRSGVRLQ
EEEEECCCCCCCC
>Mature Secondary Structure
MIRFALLFSVLAAPAVAQTAPDDRPGRWIAAPAPQGDVLQAPASGPLITTEPAPHIVLTP
CHHHHHHHHHHHCCHHHHCCCCCCCCCEEECCCCCCCEEECCCCCCEEEECCCCEEEECC
PEPASVMVAPAAAPDTQPVPRPDATAIAEPVPAQVVAELQTDPVLADRALVDPPLVDPAL
CCCCEEEEECCCCCCCCCCCCCCCHHHCCCCCHHHHHHHCCCCCHHHHHHCCCCCCCHHH
IARIEAIVSDEVLDPQAEAPHSGGAAQPPDVPPMLTVAFRPSAPSDLPVRATEDLLPAPP
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHCCCCCCC
PDSGRDAQPVPQPVAVLMPPLETTPILPRLSPSGPAAQDIVTTFPPSQAARLSAVLLPSP
CCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHEECCCCCHHHHEEEEEECCC
VTPTAPPLHLARAPAPVRDPFPMSALPPSALPEGPDTLGRLIQPLRPLPEANAAVLIGQP
CCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECC
SVIPARLPVPTPSFTPSADRPALDPEAPIILPEPDARALARMMEDAMICWRMADLDTEAG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCC
WARLSVDVALDETNRPSAASIRLTGFAHTVSGAAESAYRAAHAALTGCAEATESAPATAS
EEEEEEEEEECCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
ATLVFDRSGVRLQ
EEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA