Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89053464
Identifier: 89053464
GI number: 89053464
Start: 928912
End: 929427
Strand: Direct
Name: 89053464
Synonym: Jann_0973
Alternate gene names: NA
Gene position: 928912-929427 (Clockwise)
Preceding gene: 89053463
Following gene: 89053465
Centisome position: 21.51
GC content: 67.64
Gene sequence:
>516_bases ATGATGCGTTTGGCCCTGATCCTGTGCGGTTTCGCGACCCCGGTGACGGCGCAGGTTGTCCCCACTCCGCGCCCTGCCGA TTTGGTGGAACGGTCTCAGGCCGCCGCAGAGGCCGCCGCGACGGGGACGGAGCACGGGCCCGGGGCACCCAATGCCCTTG CCGGTGCTGCGCCGGGGCTGCCGCAGGTTGAAACGCCGGATCGGGCGGCCATCGGCGCGCAGATCGCGGAGGCTATTGAG GCGTGCTGGACCGTCTCGAACCTGTCGGAGCAGGCGCGGGGTGTCAGCATCGTGGTCGCGTTTGACACGATCCCGGAAGG GGAGGTGGTCCGCGAGAGCATCGAGATGACAGGCTTCTCCGGCGGCACGCAGGTCGCCGCTGACGAAGCTATGGCCGCGG CGGTGAGGGCGATCACGCGGTGTGCCAACGATGGCCTTGATCTGCCGCCCGAGACGTACCCTGTCTGGCAGAGGATCGAG CTTACCTTTGATCCGTTTGAGGGGCAGATGCGATGA
Upstream 100 bases:
>100_bases TCATTCGCTGCGGCGCGAACGGGTTCAATCTACCGCTGGAAAGTTACGACCGCTGGAGCCAGATCGAACTGGTCTTCAAC CCCGAAGGGATGCAGCTGCG
Downstream 100 bases:
>100_bases TCCGGTTTGCCCTTCTTTTCAGCGTTTTGGCCGCTCCTGCGGTGGCCCAGACCGCCCCCGATGATCGACCGGGGCGCTGG ATCGCCGCCCCCGCGCCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MMRLALILCGFATPVTAQVVPTPRPADLVERSQAAAEAAATGTEHGPGAPNALAGAAPGLPQVETPDRAAIGAQIAEAIE ACWTVSNLSEQARGVSIVVAFDTIPEGEVVRESIEMTGFSGGTQVAADEAMAAAVRAITRCANDGLDLPPETYPVWQRIE LTFDPFEGQMR
Sequences:
>Translated_171_residues MMRLALILCGFATPVTAQVVPTPRPADLVERSQAAAEAAATGTEHGPGAPNALAGAAPGLPQVETPDRAAIGAQIAEAIE ACWTVSNLSEQARGVSIVVAFDTIPEGEVVRESIEMTGFSGGTQVAADEAMAAAVRAITRCANDGLDLPPETYPVWQRIE LTFDPFEGQMR >Mature_171_residues MMRLALILCGFATPVTAQVVPTPRPADLVERSQAAAEAAATGTEHGPGAPNALAGAAPGLPQVETPDRAAIGAQIAEAIE ACWTVSNLSEQARGVSIVVAFDTIPEGEVVRESIEMTGFSGGTQVAADEAMAAAVRAITRCANDGLDLPPETYPVWQRIE LTFDPFEGQMR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17800; Mature: 17800
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRLALILCGFATPVTAQVVPTPRPADLVERSQAAAEAAATGTEHGPGAPNALAGAAPGL CHHHHEEHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC PQVETPDRAAIGAQIAEAIEACWTVSNLSEQARGVSIVVAFDTIPEGEVVRESIEMTGFS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHCCCC GGTQVAADEAMAAAVRAITRCANDGLDLPPETYPVWQRIELTFDPFEGQMR CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCC >Mature Secondary Structure MMRLALILCGFATPVTAQVVPTPRPADLVERSQAAAEAAATGTEHGPGAPNALAGAAPGL CHHHHEEHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC PQVETPDRAAIGAQIAEAIEACWTVSNLSEQARGVSIVVAFDTIPEGEVVRESIEMTGFS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHCCCC GGTQVAADEAMAAAVRAITRCANDGLDLPPETYPVWQRIELTFDPFEGQMR CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA