Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89053463
Identifier: 89053463
GI number: 89053463
Start: 927734
End: 928915
Strand: Direct
Name: 89053463
Synonym: Jann_0972
Alternate gene names: NA
Gene position: 927734-928915 (Clockwise)
Preceding gene: 89053462
Following gene: 89053464
Centisome position: 21.49
GC content: 70.05
Gene sequence:
>1182_bases ATGCCCCAGGACATGCGTCTCTCTCTCTACGCTTCGGGAAGTCTGCACGTGGGCCTTCTGGCCTGGGTGGCCCTGGGCGG CATGCTGTTTGACCGTAGTCCGGACACCGAGTTTGAGGTGACGGGCGTGACGCTGATGTCCGTATCCGAGTTTGAGGCCC TGACAGGTACGGCCCCCACGGCGGAGCCCGTCGTTGACCCGTCCCCGGCCAGTTTGGCGCAGCCTGCATTGCCCGAGGCG GTGTCGGCGCCAACGGCGGAAGCACCGCCCCCAGCCCAGGATGCCCCTGCCGAGAGCGAAGCCCCCCCGCCGGAAGAAAC GCCTGTCGCGGTCGAGCCAGTGCCAGAGACGGTCGTGACCGATGAGGTTGCGGCGCTTGCCCCTCCTCCCGGCGCGCCTG AGGCTGATGTGTCCCCCACGCCGCGGCCCGAAGATGCGCCACGCGTGGCCCCGGTGGCCGCCCCGCTGCCCGAGCCGGAT GTGGAGACCGCACCGGACGTGCTGGAGCAGACGACGGAGCCGGAGGTGGCCGACGACGCGGCGGTAGAAGACACGCCCGA GACGGCCCCGGAAGAGGCCACGACCGAGATTGTGACCGAAGCCGATGAGCCCGCCGCGGCCCCCCTTGGTCCGACATCCT CCGTGCGTCCCACAGCGCGCCCGTCCCGGCCCGCGCCGGTGGAACAGCCGGTCGATGTTGCCGCCGACGCCGTGGAGGAG ACTCCGGCTGAGACGGCGGCTGAGACGGCGGTGGAGACCCCGACCGAGGAGGTCGACCCGCTGGCCGCAGCCATCGCAGG GGCCGTTGCCGAAGCGGTGGAGACGCCCGATCCGACCCCTGCACCTGCCCCCTCCGGTCCGCCGCTGAGCCAAGGCGTGC GCGATGGCTTCCGGGTGGCGGTTCAGGCCTGTTGGAACGTGGGTGCGCTGTCCACCGAGGCGCTTGGTACAACGGTTGTG GTGGCCTTCGACATGGCGCGCGACGCCCGGCCGGATGCGGGCACGATCCGGATGATCGAATTCTCTGGCGGCTCGGACGT GGCAGCCCGCCAGGCCTATGAGGCCGCGCGCCGTGCGATCATTCGCTGCGGCGCGAACGGGTTCAATCTACCGCTGGAAA GTTACGACCGCTGGAGCCAGATCGAACTGGTCTTCAACCCCGAAGGGATGCAGCTGCGATGA
Upstream 100 bases:
>100_bases GCGCTGAATGCGGGCGGGTTCCGCGAGATTGGTCTGGTGACGGATGCGGGTGGCCCCCGTTTGAACGGCACCTCCGTTGG GGAAGGGGAGTGACAGGGCG
Downstream 100 bases:
>100_bases TGCGTTTGGCCCTGATCCTGTGCGGTTTCGCGACCCCGGTGACGGCGCAGGTTGTCCCCACTCCGCGCCCTGCCGATTTG GTGGAACGGTCTCAGGCCGC
Product: CheA signal transduction histidine kinase
Products: NA
Alternate protein names: LA Family Protein; NB Domain-Containing Protein; CheA Signal Transduction Histidine Kinase
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MPQDMRLSLYASGSLHVGLLAWVALGGMLFDRSPDTEFEVTGVTLMSVSEFEALTGTAPTAEPVVDPSPASLAQPALPEA VSAPTAEAPPPAQDAPAESEAPPPEETPVAVEPVPETVVTDEVAALAPPPGAPEADVSPTPRPEDAPRVAPVAAPLPEPD VETAPDVLEQTTEPEVADDAAVEDTPETAPEEATTEIVTEADEPAAAPLGPTSSVRPTARPSRPAPVEQPVDVAADAVEE TPAETAAETAVETPTEEVDPLAAAIAGAVAEAVETPDPTPAPAPSGPPLSQGVRDGFRVAVQACWNVGALSTEALGTTVV VAFDMARDARPDAGTIRMIEFSGGSDVAARQAYEAARRAIIRCGANGFNLPLESYDRWSQIELVFNPEGMQLR
Sequences:
>Translated_393_residues MPQDMRLSLYASGSLHVGLLAWVALGGMLFDRSPDTEFEVTGVTLMSVSEFEALTGTAPTAEPVVDPSPASLAQPALPEA VSAPTAEAPPPAQDAPAESEAPPPEETPVAVEPVPETVVTDEVAALAPPPGAPEADVSPTPRPEDAPRVAPVAAPLPEPD VETAPDVLEQTTEPEVADDAAVEDTPETAPEEATTEIVTEADEPAAAPLGPTSSVRPTARPSRPAPVEQPVDVAADAVEE TPAETAAETAVETPTEEVDPLAAAIAGAVAEAVETPDPTPAPAPSGPPLSQGVRDGFRVAVQACWNVGALSTEALGTTVV VAFDMARDARPDAGTIRMIEFSGGSDVAARQAYEAARRAIIRCGANGFNLPLESYDRWSQIELVFNPEGMQLR >Mature_392_residues PQDMRLSLYASGSLHVGLLAWVALGGMLFDRSPDTEFEVTGVTLMSVSEFEALTGTAPTAEPVVDPSPASLAQPALPEAV SAPTAEAPPPAQDAPAESEAPPPEETPVAVEPVPETVVTDEVAALAPPPGAPEADVSPTPRPEDAPRVAPVAAPLPEPDV ETAPDVLEQTTEPEVADDAAVEDTPETAPEEATTEIVTEADEPAAAPLGPTSSVRPTARPSRPAPVEQPVDVAADAVEET PAETAAETAVETPTEEVDPLAAAIAGAVAEAVETPDPTPAPAPSGPPLSQGVRDGFRVAVQACWNVGALSTEALGTTVVV AFDMARDARPDAGTIRMIEFSGGSDVAARQAYEAARRAIIRCGANGFNLPLESYDRWSQIELVFNPEGMQLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40477; Mature: 40346
Theoretical pI: Translated: 3.63; Mature: 3.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQDMRLSLYASGSLHVGLLAWVALGGMLFDRSPDTEFEVTGVTLMSVSEFEALTGTAPT CCCCCEEEEEECCCCHHHHHHHHHHCCHHCCCCCCCCEEEEEEEEEEHHHHHHHCCCCCC AEPVVDPSPASLAQPALPEAVSAPTAEAPPPAQDAPAESEAPPPEETPVAVEPVPETVVT CCCCCCCCCHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHH DEVAALAPPPGAPEADVSPTPRPEDAPRVAPVAAPLPEPDVETAPDVLEQTTEPEVADDA HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCC AVEDTPETAPEEATTEIVTEADEPAAAPLGPTSSVRPTARPSRPAPVEQPVDVAADAVEE CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH TPAETAAETAVETPTEEVDPLAAAIAGAVAEAVETPDPTPAPAPSGPPLSQGVRDGFRVA CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH VQACWNVGALSTEALGTTVVVAFDMARDARPDAGTIRMIEFSGGSDVAARQAYEAARRAI HHHHHCCCCCCHHHCCEEEEEEEECHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHH IRCGANGFNLPLESYDRWSQIELVFNPEGMQLR HHCCCCCCCCCHHHCCCCEEEEEEECCCCCCCC >Mature Secondary Structure PQDMRLSLYASGSLHVGLLAWVALGGMLFDRSPDTEFEVTGVTLMSVSEFEALTGTAPT CCCCEEEEEECCCCHHHHHHHHHHCCHHCCCCCCCCEEEEEEEEEEHHHHHHHCCCCCC AEPVVDPSPASLAQPALPEAVSAPTAEAPPPAQDAPAESEAPPPEETPVAVEPVPETVVT CCCCCCCCCHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHH DEVAALAPPPGAPEADVSPTPRPEDAPRVAPVAAPLPEPDVETAPDVLEQTTEPEVADDA HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCC AVEDTPETAPEEATTEIVTEADEPAAAPLGPTSSVRPTARPSRPAPVEQPVDVAADAVEE CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH TPAETAAETAVETPTEEVDPLAAAIAGAVAEAVETPDPTPAPAPSGPPLSQGVRDGFRVA CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH VQACWNVGALSTEALGTTVVVAFDMARDARPDAGTIRMIEFSGGSDVAARQAYEAARRAI HHHHHCCCCCCHHHCCEEEEEEEECHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHH IRCGANGFNLPLESYDRWSQIELVFNPEGMQLR HHCCCCCCCCCHHHCCCCEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA