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The map label for this gene is ydbC [H]

Identifier: 89053380

GI number: 89053380

Start: 843494

End: 844300

Strand: Direct

Name: ydbC [H]

Synonym: Jann_0889

Alternate gene names: 89053380

Gene position: 843494-844300 (Clockwise)

Preceding gene: 89053379

Following gene: 89053381

Centisome position: 19.53

GC content: 59.11

Gene sequence:

>807_bases
ATGAGCGCGCAAACCAACATTTCCAGCGATACCTTCGCCATCGGCGGCGACCTCATCGTCAATCGCATGGGCTATGGCGC
GATGCGCCTGACGGACCAGCCAGCCAACTTCGGACCTTATCCTGATTGGGAACAAGGCAAGGCCTTGCTGCGCCGGGCTG
CTGAGCTTGGCGTCAACTTCTTTGATACGGCCCGCGCTTACGGCCCGCAGTGGAATGAAAAACTGCTTGGTGAAGCGCTG
GAAGGGCTGCCGGACATCGTCTTTGCCACGAAGGGTGGGATCGACAAGCTATCTCCGACTGAAATGGTGAAAGACGCCAG
CCCCGCGCTCCTGAGGCAACAGATTGACGATGCCTTGGTGAATCTGCGCGTGAATCAGATCGGTCTGTTCCAACTGCATT
GGGTCGACCCGAACACGCCGATTGAGGTGTCCATCGAGGCACTGGCCAAAGCCCAGGCAGATGGGAAAATCCGGCATATC
GGTGTGTCGAACGTCACTGTCGAAGAGCTTCGCGCCGCCCAGTCCGTGGCCGCGATCGCGTCGGTTCAGAACCGGTACAA
TGTTCTGGAACGTGATCAGGATGCGATGATTGACCTGACGGCCTCCGAAGGAATTGCTTTCGTTCCTTATGGTCCCCTCG
GCGCGCATCCGATGCAGAAAGGATCGCCGCTGGCAGCTCATGCCGGGCAAGGAACCAGCACCGGGGCGCAGTCAGCGCTC
CGCGCCCTGCTGGACCGCTCACCGAATATGGTGGTGATCCCCGGAACCACTTCAATCAAGCATCTCGAAGAAAACATGGG
CGCCTGA

Upstream 100 bases:

>100_bases
CCCTCGCATTCTCTCTGGCATTTCCAAGTGTGACCCTCATCGCTCCGGTCGTTCGGCGCTTTGTGGATCGCCTCACTGAC
TGACCCAAGGAGACAGACAA

Downstream 100 bases:

>100_bases
GCGGCACCCCACACTTGCCAAACACCGGAAGATCCCAGCGATGCGCGCCAGTGTATCGCCCCGATCCTTCCATGCCTGAA
AGGAGGCGTTCAAATGAAAC

Product: aldo/keto reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MSAQTNISSDTFAIGGDLIVNRMGYGAMRLTDQPANFGPYPDWEQGKALLRRAAELGVNFFDTARAYGPQWNEKLLGEAL
EGLPDIVFATKGGIDKLSPTEMVKDASPALLRQQIDDALVNLRVNQIGLFQLHWVDPNTPIEVSIEALAKAQADGKIRHI
GVSNVTVEELRAAQSVAAIASVQNRYNVLERDQDAMIDLTASEGIAFVPYGPLGAHPMQKGSPLAAHAGQGTSTGAQSAL
RALLDRSPNMVVIPGTTSIKHLEENMGA

Sequences:

>Translated_268_residues
MSAQTNISSDTFAIGGDLIVNRMGYGAMRLTDQPANFGPYPDWEQGKALLRRAAELGVNFFDTARAYGPQWNEKLLGEAL
EGLPDIVFATKGGIDKLSPTEMVKDASPALLRQQIDDALVNLRVNQIGLFQLHWVDPNTPIEVSIEALAKAQADGKIRHI
GVSNVTVEELRAAQSVAAIASVQNRYNVLERDQDAMIDLTASEGIAFVPYGPLGAHPMQKGSPLAAHAGQGTSTGAQSAL
RALLDRSPNMVVIPGTTSIKHLEENMGA
>Mature_267_residues
SAQTNISSDTFAIGGDLIVNRMGYGAMRLTDQPANFGPYPDWEQGKALLRRAAELGVNFFDTARAYGPQWNEKLLGEALE
GLPDIVFATKGGIDKLSPTEMVKDASPALLRQQIDDALVNLRVNQIGLFQLHWVDPNTPIEVSIEALAKAQADGKIRHIG
VSNVTVEELRAAQSVAAIASVQNRYNVLERDQDAMIDLTASEGIAFVPYGPLGAHPMQKGSPLAAHAGQGTSTGAQSALR
ALLDRSPNMVVIPGTTSIKHLEENMGA

Specific function: Unknown

COG id: COG0667

COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldo/keto reductase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787674, Length=269, Percent_Identity=41.635687732342, Blast_Score=174, Evalue=4e-45,
Organism=Escherichia coli, GI87081735, Length=213, Percent_Identity=33.8028169014084, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI1788070, Length=212, Percent_Identity=29.2452830188679, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1789375, Length=194, Percent_Identity=30.9278350515464, Blast_Score=77, Evalue=8e-16,
Organism=Escherichia coli, GI1786400, Length=226, Percent_Identity=28.7610619469027, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 28698; Mature: 28567

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAQTNISSDTFAIGGDLIVNRMGYGAMRLTDQPANFGPYPDWEQGKALLRRAAELGVNF
CCCCCCCCCCEEEECHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCH
FDTARAYGPQWNEKLLGEALEGLPDIVFATKGGIDKLSPTEMVKDASPALLRQQIDDALV
HHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHCCCHHHHHHHHHHHHH
NLRVNQIGLFQLHWVDPNTPIEVSIEALAKAQADGKIRHIGVSNVTVEELRAAQSVAAIA
HEEECEEEEEEEEEECCCCCEEEEHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHH
SVQNRYNVLERDQDAMIDLTASEGIAFVPYGPLGAHPMQKGSPLAAHAGQGTSTGAQSAL
HHHHHHHHHHCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCEEECCCCCCHHHHHHH
RALLDRSPNMVVIPGTTSIKHLEENMGA
HHHHCCCCCEEEECCCCHHHHHHHHCCC
>Mature Secondary Structure 
SAQTNISSDTFAIGGDLIVNRMGYGAMRLTDQPANFGPYPDWEQGKALLRRAAELGVNF
CCCCCCCCCEEEECHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCH
FDTARAYGPQWNEKLLGEALEGLPDIVFATKGGIDKLSPTEMVKDASPALLRQQIDDALV
HHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHCCCHHHHHHHHHHHHH
NLRVNQIGLFQLHWVDPNTPIEVSIEALAKAQADGKIRHIGVSNVTVEELRAAQSVAAIA
HEEECEEEEEEEEEECCCCCEEEEHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHH
SVQNRYNVLERDQDAMIDLTASEGIAFVPYGPLGAHPMQKGSPLAAHAGQGTSTGAQSAL
HHHHHHHHHHCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCEEECCCCCCHHHHHHH
RALLDRSPNMVVIPGTTSIKHLEENMGA
HHHHCCCCCEEEECCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1665988; 9097039; 9278503; 9748275 [H]