Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053379

Identifier: 89053379

GI number: 89053379

Start: 843186

End: 843476

Strand: Direct

Name: 89053379

Synonym: Jann_0888

Alternate gene names: NA

Gene position: 843186-843476 (Clockwise)

Preceding gene: 89053377

Following gene: 89053380

Centisome position: 19.53

GC content: 57.73

Gene sequence:

>291_bases
ATGGAGGCGCGCATCTTCATGTCATCGACGACAAGAGAGTGCGACATGCAACTTGCAGCCCAACGCCTGAAACTGCCGAA
ACGCCTCGCCCCGGTCCTTTTTGCCTTCATCATGTCCGCCAGCCTTGGTGGCGTGATGTCAGCGATTATTACCGCCGTGA
ACACTGGTTTCGATGCAGGATATCTCGGCCGCTGGCTGCACGCCTACGCCCTCGCATTCTCTCTGGCATTTCCAAGTGTG
ACCCTCATCGCTCCGGTCGTTCGGCGCTTTGTGGATCGCCTCACTGACTGA

Upstream 100 bases:

>100_bases
GCGGCTTGAATGAACGTCTCGATGAGGCGCAGGTCAATCATATCTCATTAATCAGTCGAACTAACAAGTGATGTCAATGC
GAGGCATATTCTAAAAGCTG

Downstream 100 bases:

>100_bases
CCCAAGGAGACAGACAAATGAGCGCGCAAACCAACATTTCCAGCGATACCTTCGCCATCGGCGGCGACCTCATCGTCAAT
CGCATGGGCTATGGCGCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MEARIFMSSTTRECDMQLAAQRLKLPKRLAPVLFAFIMSASLGGVMSAIITAVNTGFDAGYLGRWLHAYALAFSLAFPSV
TLIAPVVRRFVDRLTD

Sequences:

>Translated_96_residues
MEARIFMSSTTRECDMQLAAQRLKLPKRLAPVLFAFIMSASLGGVMSAIITAVNTGFDAGYLGRWLHAYALAFSLAFPSV
TLIAPVVRRFVDRLTD
>Mature_96_residues
MEARIFMSSTTRECDMQLAAQRLKLPKRLAPVLFAFIMSASLGGVMSAIITAVNTGFDAGYLGRWLHAYALAFSLAFPSV
TLIAPVVRRFVDRLTD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10555; Mature: 10555

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEARIFMSSTTRECDMQLAAQRLKLPKRLAPVLFAFIMSASLGGVMSAIITAVNTGFDAG
CCCEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
YLGRWLHAYALAFSLAFPSVTLIAPVVRRFVDRLTD
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEARIFMSSTTRECDMQLAAQRLKLPKRLAPVLFAFIMSASLGGVMSAIITAVNTGFDAG
CCCEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
YLGRWLHAYALAFSLAFPSVTLIAPVVRRFVDRLTD
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA