Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is iorB [H]
Identifier: 89053366
GI number: 89053366
Start: 830359
End: 832455
Strand: Direct
Name: iorB [H]
Synonym: Jann_0875
Alternate gene names: 89053366
Gene position: 830359-832455 (Clockwise)
Preceding gene: 89053365
Following gene: 89053367
Centisome position: 19.23
GC content: 65.67
Gene sequence:
>2097_bases ATGAACATGTCGCTGGAAACCAATCCTCTGCCCTCCCAATGGCTGGAGCTGCGGGCGGAGGGGATCGTGCTCAAATCCGG CAAGGTCGAGATTGGCCAAGGCCTTGGCACCGCGCTTTTGCAGATAGCGGCGGATGCGCTTGAGGTGCCGTTGGATCGCC TGACGCTGGTGGCAGGTGACACCGCGACGACGCCGGATGAGATGTGGACATCCGCCTCGATCTCCATCGAAGTGGGTGGC GCGGCGGTCCGGATGATATGCCTTGCCGTGCGGAACCGCGCGCAGATCGCCGCGGCCCGTATCCTGAACGCAGCGCCCGA TGCTGTCACGCTGACGGATGGTGTGTTCGGGGCTGAGACGTCTGACAGGCGGCTGAGTTACGCGGATTTGCGGGGGGATC TGGACCTTGGTCGCCCGCTGAACGCGGCGGAGGTCGCATCGGTCAAACCCCGCCCAAATACCGTCGTCGGCACCCCCGTC CCGCGCCACGACTTGCTGCAAAAGCTGACCGGCGCCGCGTTCATCCACGACATGGACCGCCCCGGCATGTTGCACGGGCG TGTCCTGCTGCCCGCGCGCCCCGGTGCCCGGCTGGCGCCCTTGGATCTGACCGGGATCGAGGCCCTCCCCGGCGTGCGCC TTGTCCACCGTGATGGCGATTTCGTGGGTCTTTGCGCCGTGCGCGAGGAACAGGCCATTGCCGCCCTGACCAAGTTGGAG GCGATGGCGGTCTGGGCCGGCGGCACAGCGCCCGATGCGTCTGACGTTCCTGCGCTGCTGGCGAAATATGATGCGACCGC CACCGCTGTCGTGCTGCCTGATCCCCTGCCAGACCCCATGCCCGAAGGCGACGATATCAGCCACACGTTCACGCGGCCTT TTATCGCCCACGCCTCCATCGGATTGTGCTGCGCCATTGCAGAGCCTGACGGTGACGGCCTCCATGTCTGGAGCCATTCG CAGGGCGTGTTCCCCCTGCGCCGCGCGCTTGCAGCAGCGCTGGATCTGCCGGAAGACGCCGTGCGTGTCACCCATGCCGA CGGGGCCGGGTGTTACGGGCATAACGGGGCCGATGATGTGGCGCTGGATGCCGCCCTTTTGGCGCGCGCCGCCGGTGCGC CGGTTCGAGTGGTCTGGACGCGGCAGCAGGAGCTTACCGCTGCGCCCGCCGGTCCCGCGATGTCTGCGCGTTTGACGGCT TCGCTGGATGAAAGCGGGCGCATCGACCGCTGGACCCACACAGTCAAAAGCTTCACCCACCTGACCCGTCCGGGATGGGG GGACGGCGTGAACCTGTGTTCCGCGTGGCGTATGGCGCAGCCTAAACAGCAGGCACCCACCGCGGATCCCGGGCAGGTCC CGTTTGGCGGCGCGGGGTGCCGGAATGCGCCGCCGATCTATAATGTGCCTGCCGTCATCGACTATGCGCTGATCCCGGAC CGCCCCCTGCGCACCTCAGCCGTGCGGGCCTTGGGGGCGCATCTGAATGTCTTCGCGATTGAGGCGATGATGGATGATCT GGCCGAGACGGTCGCGGCAGACCCCATCGACTTCCGCCTCAACCACCTGCCAGACCCCCGCGCGCGGCGTGTGCTGGACC GGGTGCGCGAAATCTCAGACTGGCCACCGGCCCCTTCGGACGGAGAAGCCGGGCGTGGTTTGGGCTTTGCGCGTTACAAG AATTCCGGCGCTTATTGCGCCATCGTTGCGGACATCGCGCTGGACGCTGAGATCAAGGTCAGCCGCGTGTGGTGCGTGGT GGATGCGGGCCTTGCCATCAACCCTGACGGACTGCGCAACCAGTTGGAAGGCGGCATCACTCAAGCCATCAGCTTCACCC TGCATGAGGCGTTGGAGTGGTCCAAAGAGGGATTCCGCGCCGCCGATTGGGACGCCTATCCCATCCTCCGTTTCGATGCC GTACCGCACGTCCAAACGGATCTGATCGGTGATCCCGAAGACCCGCCTTTGGGCGTTGGGGAATGCACGACCGGGCCCAT GGCAGCGGCGCTTGGCAATGCGGTAAAGCAAGCGCTTGGCGTTCGGATTTGTGATATGCCGTTGACAGTAGACCGAATTG CAGCGGCGTTCGTTTAG
Upstream 100 bases:
>100_bases ACGCCGCGTTGATCGACTATCTGTCGGAGCGCCATCTGTGCCGGTGCGGCACCCATACCCGCATCCTCAGCGCAATCCGG GACGTGCGGCAGGGTGCGGC
Downstream 100 bases:
>100_bases ATAGAAAGAAGGCGACATGGCTCAGGCAGCAGAAAAACTCACGGCGGCGTCGGCGATCTATGCAGCGATCAAGAGCGACC TGCTGCGCGGTATCTTTCCA
Product: molybdopterin binding aldehyde oxidase and xanthine dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 698; Mature: 698
Protein sequence:
>698_residues MNMSLETNPLPSQWLELRAEGIVLKSGKVEIGQGLGTALLQIAADALEVPLDRLTLVAGDTATTPDEMWTSASISIEVGG AAVRMICLAVRNRAQIAAARILNAAPDAVTLTDGVFGAETSDRRLSYADLRGDLDLGRPLNAAEVASVKPRPNTVVGTPV PRHDLLQKLTGAAFIHDMDRPGMLHGRVLLPARPGARLAPLDLTGIEALPGVRLVHRDGDFVGLCAVREEQAIAALTKLE AMAVWAGGTAPDASDVPALLAKYDATATAVVLPDPLPDPMPEGDDISHTFTRPFIAHASIGLCCAIAEPDGDGLHVWSHS QGVFPLRRALAAALDLPEDAVRVTHADGAGCYGHNGADDVALDAALLARAAGAPVRVVWTRQQELTAAPAGPAMSARLTA SLDESGRIDRWTHTVKSFTHLTRPGWGDGVNLCSAWRMAQPKQQAPTADPGQVPFGGAGCRNAPPIYNVPAVIDYALIPD RPLRTSAVRALGAHLNVFAIEAMMDDLAETVAADPIDFRLNHLPDPRARRVLDRVREISDWPPAPSDGEAGRGLGFARYK NSGAYCAIVADIALDAEIKVSRVWCVVDAGLAINPDGLRNQLEGGITQAISFTLHEALEWSKEGFRAADWDAYPILRFDA VPHVQTDLIGDPEDPPLGVGECTTGPMAAALGNAVKQALGVRICDMPLTVDRIAAAFV
Sequences:
>Translated_698_residues MNMSLETNPLPSQWLELRAEGIVLKSGKVEIGQGLGTALLQIAADALEVPLDRLTLVAGDTATTPDEMWTSASISIEVGG AAVRMICLAVRNRAQIAAARILNAAPDAVTLTDGVFGAETSDRRLSYADLRGDLDLGRPLNAAEVASVKPRPNTVVGTPV PRHDLLQKLTGAAFIHDMDRPGMLHGRVLLPARPGARLAPLDLTGIEALPGVRLVHRDGDFVGLCAVREEQAIAALTKLE AMAVWAGGTAPDASDVPALLAKYDATATAVVLPDPLPDPMPEGDDISHTFTRPFIAHASIGLCCAIAEPDGDGLHVWSHS QGVFPLRRALAAALDLPEDAVRVTHADGAGCYGHNGADDVALDAALLARAAGAPVRVVWTRQQELTAAPAGPAMSARLTA SLDESGRIDRWTHTVKSFTHLTRPGWGDGVNLCSAWRMAQPKQQAPTADPGQVPFGGAGCRNAPPIYNVPAVIDYALIPD RPLRTSAVRALGAHLNVFAIEAMMDDLAETVAADPIDFRLNHLPDPRARRVLDRVREISDWPPAPSDGEAGRGLGFARYK NSGAYCAIVADIALDAEIKVSRVWCVVDAGLAINPDGLRNQLEGGITQAISFTLHEALEWSKEGFRAADWDAYPILRFDA VPHVQTDLIGDPEDPPLGVGECTTGPMAAALGNAVKQALGVRICDMPLTVDRIAAAFV >Mature_698_residues MNMSLETNPLPSQWLELRAEGIVLKSGKVEIGQGLGTALLQIAADALEVPLDRLTLVAGDTATTPDEMWTSASISIEVGG AAVRMICLAVRNRAQIAAARILNAAPDAVTLTDGVFGAETSDRRLSYADLRGDLDLGRPLNAAEVASVKPRPNTVVGTPV PRHDLLQKLTGAAFIHDMDRPGMLHGRVLLPARPGARLAPLDLTGIEALPGVRLVHRDGDFVGLCAVREEQAIAALTKLE AMAVWAGGTAPDASDVPALLAKYDATATAVVLPDPLPDPMPEGDDISHTFTRPFIAHASIGLCCAIAEPDGDGLHVWSHS QGVFPLRRALAAALDLPEDAVRVTHADGAGCYGHNGADDVALDAALLARAAGAPVRVVWTRQQELTAAPAGPAMSARLTA SLDESGRIDRWTHTVKSFTHLTRPGWGDGVNLCSAWRMAQPKQQAPTADPGQVPFGGAGCRNAPPIYNVPAVIDYALIPD RPLRTSAVRALGAHLNVFAIEAMMDDLAETVAADPIDFRLNHLPDPRARRVLDRVREISDWPPAPSDGEAGRGLGFARYK NSGAYCAIVADIALDAEIKVSRVWCVVDAGLAINPDGLRNQLEGGITQAISFTLHEALEWSKEGFRAADWDAYPILRFDA VPHVQTDLIGDPEDPPLGVGECTTGPMAAALGNAVKQALGVRICDMPLTVDRIAAAFV
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012368 - InterPro: IPR006311 [H]
Pfam domain/function: PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 73833; Mature: 73833
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMSLETNPLPSQWLELRAEGIVLKSGKVEIGQGLGTALLQIAADALEVPLDRLTLVAGD CCCCCCCCCCCHHHHHHHHCCEEEECCCEEECCCHHHHHHHHHHHHHHCCHHHEEEEECC TATTPDEMWTSASISIEVGGAAVRMICLAVRNRAQIAAARILNAAPDAVTLTDGVFGAET CCCCHHHHHCCEEEEEEECHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEEECCCCCCCC SDRRLSYADLRGDLDLGRPLNAAEVASVKPRPNTVVGTPVPRHDLLQKLTGAAFIHDMDR CCCEEEHHHCCCCCCCCCCCCHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHEEECCCC PGMLHGRVLLPARPGARLAPLDLTGIEALPGVRLVHRDGDFVGLCAVREEQAIAALTKLE CCCEECEEEEECCCCCEECCCCCCCCCCCCCEEEEEECCCEEEEEEECHHHHHHHHHHHH AMAVWAGGTAPDASDVPALLAKYDATATAVVLPDPLPDPMPEGDDISHTFTRPFIAHASI EEEEEECCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHCCCHHHHCCC GLCCAIAEPDGDGLHVWSHSQGVFPLRRALAAALDLPEDAVRVTHADGAGCYGHNGADDV CEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHCCCHHHEEEEECCCCCCCCCCCCCHH ALDAALLARAAGAPVRVVWTRQQELTAAPAGPAMSARLTASLDESGRIDRWTHTVKSFTH HHHHHHHHHHCCCCEEEEEECCHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHH LTRPGWGDGVNLCSAWRMAQPKQQAPTADPGQVPFGGAGCRNAPPIYNVPAVIDYALIPD HCCCCCCCCHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEECCC RPLRTSAVRALGAHLNVFAIEAMMDDLAETVAADPIDFRLNHLPDPRARRVLDRVREISD CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEHCCCCCCHHHHHHHHHHHHHCC WPPAPSDGEAGRGLGFARYKNSGAYCAIVADIALDAEIKVSRVWCVVDAGLAINPDGLRN CCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEEECCEEEEEEEEEEEECCCEECCHHHHH QLEGGITQAISFTLHEALEWSKEGFRAADWDAYPILRFDAVPHVQTDLIGDPEDPPLGVG HHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCHHCCCCCCCCCCCCCC ECTTGPMAAALGNAVKQALGVRICDMPLTVDRIAAAFV CCCCCHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHCC >Mature Secondary Structure MNMSLETNPLPSQWLELRAEGIVLKSGKVEIGQGLGTALLQIAADALEVPLDRLTLVAGD CCCCCCCCCCCHHHHHHHHCCEEEECCCEEECCCHHHHHHHHHHHHHHCCHHHEEEEECC TATTPDEMWTSASISIEVGGAAVRMICLAVRNRAQIAAARILNAAPDAVTLTDGVFGAET CCCCHHHHHCCEEEEEEECHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEEECCCCCCCC SDRRLSYADLRGDLDLGRPLNAAEVASVKPRPNTVVGTPVPRHDLLQKLTGAAFIHDMDR CCCEEEHHHCCCCCCCCCCCCHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHEEECCCC PGMLHGRVLLPARPGARLAPLDLTGIEALPGVRLVHRDGDFVGLCAVREEQAIAALTKLE CCCEECEEEEECCCCCEECCCCCCCCCCCCCEEEEEECCCEEEEEEECHHHHHHHHHHHH AMAVWAGGTAPDASDVPALLAKYDATATAVVLPDPLPDPMPEGDDISHTFTRPFIAHASI EEEEEECCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHCCCHHHHCCC GLCCAIAEPDGDGLHVWSHSQGVFPLRRALAAALDLPEDAVRVTHADGAGCYGHNGADDV CEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHCCCHHHEEEEECCCCCCCCCCCCCHH ALDAALLARAAGAPVRVVWTRQQELTAAPAGPAMSARLTASLDESGRIDRWTHTVKSFTH HHHHHHHHHHCCCCEEEEEECCHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHH LTRPGWGDGVNLCSAWRMAQPKQQAPTADPGQVPFGGAGCRNAPPIYNVPAVIDYALIPD HCCCCCCCCHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEECCC RPLRTSAVRALGAHLNVFAIEAMMDDLAETVAADPIDFRLNHLPDPRARRVLDRVREISD CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEHCCCCCCHHHHHHHHHHHHHCC WPPAPSDGEAGRGLGFARYKNSGAYCAIVADIALDAEIKVSRVWCVVDAGLAINPDGLRN CCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEEECCEEEEEEEEEEEECCCEECCHHHHH QLEGGITQAISFTLHEALEWSKEGFRAADWDAYPILRFDAVPHVQTDLIGDPEDPPLGVG HHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCHHCCCCCCCCCCCCCC ECTTGPMAAALGNAVKQALGVRICDMPLTVDRIAAAFV CCCCCHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]