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The map label for this gene is deoD

Identifier: 89053290

GI number: 89053290

Start: 760660

End: 761364

Strand: Direct

Name: deoD

Synonym: Jann_0799

Alternate gene names: 89053290

Gene position: 760660-761364 (Clockwise)

Preceding gene: 89053289

Following gene: 89053291

Centisome position: 17.62

GC content: 61.13

Gene sequence:

>705_bases
ATGACGGTTCATATCGGAGCAGCCCCCGGCGATATCGCGGAAACGGTATTGATGCCGGGCGATCCACTTCGGGCCAAATG
GGCGGCAGAGCGGTTTCTGGAAAATCCGGTTTGCGTCAATGAGGTCCGGGGGATGCTTGGATTTACGGGGATGTGGCGCG
GCAATCGCGTCACCATCCACGGATCCGGTATGGGCATGCCGAGCCTGTCGATCTACGCCAACGAATTGCTCCGCGATTAC
GGAGCCAAGACGTTGATCCGGATCGGTTCGTGCGGGGCGATGCAGGCGGATGTGAAGTTGCGGGACGTGATCCTGGCGAT
GACCGCCTCGACCCTGTCGACGCCGTCGTCGGGCATTTTCCGGGAGCTGAATTATGCGCCCTGTGCCGATTATGGCTTGC
TTCAGGCAGCTTATAAGGCGGCCGAAGGGAAGGGCTCCCCGATCCATGTGGGCGGGATTTATTCGTCTGATGTGTTCTAT
GACGAGCGCCCGGACCTGAACGAGCAGATGGTGCGCCATGGCGTCTTGGCCGTGGAGATGGAAGCGGCAGAACTCTACAC
GCTGGCGGCCCGCCACAAGGCGCGCGCGCTGGCGGTGTTGACCGTGTCCGACCATTTGCTGACGGAGGAGGCGTTGCCTT
CGGAAGAGCGTCAGTCGAGCTTCTCGGACATGGTGGAGATCGCGCTGGAAGCGGCGTTTTCGTGA

Upstream 100 bases:

>100_bases
CCGCGGACAAATCGCAGACATGGACGGGCCGTGGCCGTCAGCCCAATTGGGTGAAAGAGGCTTTGTCCTCCGGTAAATCG
CTGGATGAGTTCGCGATCTG

Downstream 100 bases:

>100_bases
GGCCGCTGGCGGGACATGCGGTGGGGCCGATTGGCCTGGGCTGCATGAGCTTCGGTGGCATTTACGGGGCCACGAATGAA
GAAGAGAGTTTCGCCTGCAT

Product: purine nucleoside phosphorylase

Products: NA

Alternate protein names: PNP

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MTVHIGAAPGDIAETVLMPGDPLRAKWAAERFLENPVCVNEVRGMLGFTGMWRGNRVTIHGSGMGMPSLSIYANELLRDY
GAKTLIRIGSCGAMQADVKLRDVILAMTASTLSTPSSGIFRELNYAPCADYGLLQAAYKAAEGKGSPIHVGGIYSSDVFY
DERPDLNEQMVRHGVLAVEMEAAELYTLAARHKARALAVLTVSDHLLTEEALPSEERQSSFSDMVEIALEAAFS

Sequences:

>Translated_234_residues
MTVHIGAAPGDIAETVLMPGDPLRAKWAAERFLENPVCVNEVRGMLGFTGMWRGNRVTIHGSGMGMPSLSIYANELLRDY
GAKTLIRIGSCGAMQADVKLRDVILAMTASTLSTPSSGIFRELNYAPCADYGLLQAAYKAAEGKGSPIHVGGIYSSDVFY
DERPDLNEQMVRHGVLAVEMEAAELYTLAARHKARALAVLTVSDHLLTEEALPSEERQSSFSDMVEIALEAAFS
>Mature_233_residues
TVHIGAAPGDIAETVLMPGDPLRAKWAAERFLENPVCVNEVRGMLGFTGMWRGNRVTIHGSGMGMPSLSIYANELLRDYG
AKTLIRIGSCGAMQADVKLRDVILAMTASTLSTPSSGIFRELNYAPCADYGLLQAAYKAAEGKGSPIHVGGIYSSDVFYD
ERPDLNEQMVRHGVLAVEMEAAELYTLAARHKARALAVLTVSDHLLTEEALPSEERQSSFSDMVEIALEAAFS

Specific function: Cleavage Of Guanosine Or Inosine To Respective Bases And Sugar-1-Phosphate Molecules. [C]

COG id: COG0813

COG function: function code F; Purine-nucleoside phosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PNP/UDP phosphorylase family

Homologues:

Organism=Escherichia coli, GI1790844, Length=230, Percent_Identity=48.695652173913, Blast_Score=233, Evalue=9e-63,
Organism=Escherichia coli, GI1790265, Length=245, Percent_Identity=33.0612244897959, Blast_Score=94, Evalue=8e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DEOD_JANSC (Q28U96)

Other databases:

- EMBL:   CP000264
- RefSeq:   YP_508741.1
- HSSP:   P0A1F6
- ProteinModelPortal:   Q28U96
- SMR:   Q28U96
- STRING:   Q28U96
- GeneID:   3933242
- GenomeReviews:   CP000264_GR
- KEGG:   jan:Jann_0799
- eggNOG:   COG0813
- HOGENOM:   HBG617197
- OMA:   SFETHAF
- PhylomeDB:   Q28U96
- ProtClustDB:   PRK05819
- BioCyc:   JSP290400:JANN_0799-MONOMER
- HAMAP:   MF_01627
- InterPro:   IPR004402
- InterPro:   IPR018017
- InterPro:   IPR018016
- InterPro:   IPR000845
- PANTHER:   PTHR21234
- TIGRFAMs:   TIGR00107

Pfam domain/function: PF01048 PNP_UDP_1

EC number: =2.4.2.1

Molecular weight: Translated: 25281; Mature: 25150

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS01232 PNP_UDP_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVHIGAAPGDIAETVLMPGDPLRAKWAAERFLENPVCVNEVRGMLGFTGMWRGNRVTIH
CEEEECCCCCHHHHHEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEEE
GSGMGMPSLSIYANELLRDYGAKTLIRIGSCGAMQADVKLRDVILAMTASTLSTPSSGIF
ECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCEECCHHHHHHHHHHHHHHCCCCCCHHH
RELNYAPCADYGLLQAAYKAAEGKGSPIHVGGIYSSDVFYDERPDLNEQMVRHGVLAVEM
HHCCCCCCCCHHHHHHHHHHCCCCCCEEEECCEECCCCEECCCCCHHHHHHHCCEEEEEE
EAAELYTLAARHKARALAVLTVSDHLLTEEALPSEERQSSFSDMVEIALEAAFS
HHHHHHHHHHHHCCEEEEEEEECCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TVHIGAAPGDIAETVLMPGDPLRAKWAAERFLENPVCVNEVRGMLGFTGMWRGNRVTIH
EEEECCCCCHHHHHEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEEE
GSGMGMPSLSIYANELLRDYGAKTLIRIGSCGAMQADVKLRDVILAMTASTLSTPSSGIF
ECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCEECCHHHHHHHHHHHHHHCCCCCCHHH
RELNYAPCADYGLLQAAYKAAEGKGSPIHVGGIYSSDVFYDERPDLNEQMVRHGVLAVEM
HHCCCCCCCCHHHHHHHHHHCCCCCCEEEECCEECCCCEECCCCCHHHHHHHCCEEEEEE
EAAELYTLAARHKARALAVLTVSDHLLTEEALPSEERQSSFSDMVEIALEAAFS
HHHHHHHHHHHHCCEEEEEEEECCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA