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The map label for this gene is hvrA [H]

Identifier: 89053289

GI number: 89053289

Start: 760301

End: 760660

Strand: Direct

Name: hvrA [H]

Synonym: Jann_0798

Alternate gene names: 89053289

Gene position: 760301-760660 (Clockwise)

Preceding gene: 89053288

Following gene: 89053290

Centisome position: 17.61

GC content: 53.61

Gene sequence:

>360_bases
ATGTGCCTGTTTATTAGCAGCCATTACGAAGGGGAATTCACTATGGCAAAGGCACTGGAAAAAATGAGCCTGGAAGAGCT
CCAAGCCCATCAACGGGATGTGGAGGCAACGATCAAAGGTTATGAAAAGAAGCGCAGGGCAGATTGCCTGGCCGAGCTGA
AAGCCGTCGCAAAGAAGCACGGATTTTCACTGGATGAGTTTACCGGCGGTAAATCCGGCTCGAAATCCGGGCCCAAGGGT
GTTGCGAAATACGCCAACCCCGCGGACAAATCGCAGACATGGACGGGCCGTGGCCGTCAGCCCAATTGGGTGAAAGAGGC
TTTGTCCTCCGGTAAATCGCTGGATGAGTTCGCGATCTGA

Upstream 100 bases:

>100_bases
GTTGACCCTACGGAAATTGCTGCTGAATAAGTGTCAGCCCTTTCGCGCTCAAAAAAGAACATGTCTAAAAGTTTGCTTGC
CATTGGTAGGTCTTTTCTGC

Downstream 100 bases:

>100_bases
TGACGGTTCATATCGGAGCAGCCCCCGGCGATATCGCGGAAACGGTATTGATGCCGGGCGATCCACTTCGGGCCAAATGG
GCGGCAGAGCGGTTTCTGGA

Product: histone-like nucleoid-structuring protein H-NS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MCLFISSHYEGEFTMAKALEKMSLEELQAHQRDVEATIKGYEKKRRADCLAELKAVAKKHGFSLDEFTGGKSGSKSGPKG
VAKYANPADKSQTWTGRGRQPNWVKEALSSGKSLDEFAI

Sequences:

>Translated_119_residues
MCLFISSHYEGEFTMAKALEKMSLEELQAHQRDVEATIKGYEKKRRADCLAELKAVAKKHGFSLDEFTGGKSGSKSGPKG
VAKYANPADKSQTWTGRGRQPNWVKEALSSGKSLDEFAI
>Mature_119_residues
MCLFISSHYEGEFTMAKALEKMSLEELQAHQRDVEATIKGYEKKRRADCLAELKAVAKKHGFSLDEFTGGKSGSKSGPKG
VAKYANPADKSQTWTGRGRQPNWVKEALSSGKSLDEFAI

Specific function: It is a dim-light trans-acting activator of Puf and Puh expression, but has no effect on the expression of the Puc operon. It is responsible for regulating light-harvesting-I and reaction center structural gene expression differentially from that of light

COG id: COG2916

COG function: function code R; DNA-binding protein H-NS

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the histone-like protein H-NS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001801 [H]

Pfam domain/function: PF00816 Histone_HNS [H]

EC number: NA

Molecular weight: Translated: 13128; Mature: 13128

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCLFISSHYEGEFTMAKALEKMSLEELQAHQRDVEATIKGYEKKRRADCLAELKAVAKKH
CEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFSLDEFTGGKSGSKSGPKGVAKYANPADKSQTWTGRGRQPNWVKEALSSGKSLDEFAI
CCCCHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHCC
>Mature Secondary Structure
MCLFISSHYEGEFTMAKALEKMSLEELQAHQRDVEATIKGYEKKRRADCLAELKAVAKKH
CEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFSLDEFTGGKSGSKSGPKGVAKYANPADKSQTWTGRGRQPNWVKEALSSGKSLDEFAI
CCCCHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7961455 [H]