Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89053287
Identifier: 89053287
GI number: 89053287
Start: 757051
End: 757755
Strand: Direct
Name: 89053287
Synonym: Jann_0796
Alternate gene names: NA
Gene position: 757051-757755 (Clockwise)
Preceding gene: 89053281
Following gene: 89053288
Centisome position: 17.53
GC content: 60.0
Gene sequence:
>705_bases GTGTTTAAGAAAATTGTAGCTGCAAGTATTGCGGCGGTTGTTTTCGCCGGCGCGGCCCAAGCCGTACCGCTCAGCGGTGT GTTTGATGTCGTCGCAATTAACGTAACCAATGCGTCACGCGCGCAATCGCAGGCGACGTTCGGGAACTATGTCGATGCGA TCAATGGCGTCGATACATCGCCCAATACGACGTCGACGTTCGAGACGCATATCTTCAACTACGACGGCATTCTCGATTTT GACACGCGCGGTGAGCCGTTTTCGCCCCTGACCACGATCAGCCAGTTCCTCTCTACCGGGACCGGGACGCTTATCGGGAT GGACAACACGTTTGGATCGCTGCGCAACAGCCAGGGCAATATCGACGACGCCACGGCGACGACCACGTTCTACTTTTTCT CGTTGAAGACCGCGACACCCTACGACCTGACCATTACCCATGACGATGGTGTGGCCGTCTTCAACAACGGAGACTTGCTC GGCGGATTGGTCGGACCGAATGCCGTTCAACCGGAGCCCACGCTGGTGAACGGCTCTGTCGCGGGCGACCTGAGCTTCCT TTACGTGTCCACCAACAGCGACCCGTCGGTCTTTATCGTGGACGCCGCCGAAGTGGCTCCGGTGCCGCTGCCTGCGGGCG CGGTGCTGCTGCTGGGTGCTTTGGGCGGCCTGGCCGTGGTGCGCCATCGCAAGCGCCCCGCCTGA
Upstream 100 bases:
>100_bases TTTACACTTCTGAATGTGCGGAAGGGATGGCATAAGAGTCTCGCCCGAACGGAGAGGTCGGGACCAAATCGAAAGACAGT TAACCCAAGGGGAATGTGAA
Downstream 100 bases:
>100_bases GCGAGGGCTGTGCAGGAGTGGAGGGCCGTCCCATTGGGGGCGGCCTTTTTGCGTGCGGTGATGAGCTGACGGCGTCTGCG TGATATGCCCGGATGAAACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MFKKIVAASIAAVVFAGAAQAVPLSGVFDVVAINVTNASRAQSQATFGNYVDAINGVDTSPNTTSTFETHIFNYDGILDF DTRGEPFSPLTTISQFLSTGTGTLIGMDNTFGSLRNSQGNIDDATATTTFYFFSLKTATPYDLTITHDDGVAVFNNGDLL GGLVGPNAVQPEPTLVNGSVAGDLSFLYVSTNSDPSVFIVDAAEVAPVPLPAGAVLLLGALGGLAVVRHRKRPA
Sequences:
>Translated_234_residues MFKKIVAASIAAVVFAGAAQAVPLSGVFDVVAINVTNASRAQSQATFGNYVDAINGVDTSPNTTSTFETHIFNYDGILDF DTRGEPFSPLTTISQFLSTGTGTLIGMDNTFGSLRNSQGNIDDATATTTFYFFSLKTATPYDLTITHDDGVAVFNNGDLL GGLVGPNAVQPEPTLVNGSVAGDLSFLYVSTNSDPSVFIVDAAEVAPVPLPAGAVLLLGALGGLAVVRHRKRPA >Mature_234_residues MFKKIVAASIAAVVFAGAAQAVPLSGVFDVVAINVTNASRAQSQATFGNYVDAINGVDTSPNTTSTFETHIFNYDGILDF DTRGEPFSPLTTISQFLSTGTGTLIGMDNTFGSLRNSQGNIDDATATTTFYFFSLKTATPYDLTITHDDGVAVFNNGDLL GGLVGPNAVQPEPTLVNGSVAGDLSFLYVSTNSDPSVFIVDAAEVAPVPLPAGAVLLLGALGGLAVVRHRKRPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24267; Mature: 24267
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKKIVAASIAAVVFAGAAQAVPLSGVFDVVAINVTNASRAQSQATFGNYVDAINGVDTS CCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCC PNTTSTFETHIFNYDGILDFDTRGEPFSPLTTISQFLSTGTGTLIGMDNTFGSLRNSQGN CCCCCEEEEEEECCCCEEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHCCCCCC IDDATATTTFYFFSLKTATPYDLTITHDDGVAVFNNGDLLGGLVGPNAVQPEPTLVNGSV CCCCEEEEEEEEEEECCCCCEEEEEECCCCEEEEECCCEEEEECCCCCCCCCCEEECCCC AGDLSFLYVSTNSDPSVFIVDAAEVAPVPLPAGAVLLLGALGGLAVVRHRKRPA CCCEEEEEEEECCCCCEEEEECHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MFKKIVAASIAAVVFAGAAQAVPLSGVFDVVAINVTNASRAQSQATFGNYVDAINGVDTS CCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCC PNTTSTFETHIFNYDGILDFDTRGEPFSPLTTISQFLSTGTGTLIGMDNTFGSLRNSQGN CCCCCEEEEEEECCCCEEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHCCCCCC IDDATATTTFYFFSLKTATPYDLTITHDDGVAVFNNGDLLGGLVGPNAVQPEPTLVNGSV CCCCEEEEEEEEEEECCCCCEEEEEECCCCEEEEECCCEEEEECCCCCCCCCCEEECCCC AGDLSFLYVSTNSDPSVFIVDAAEVAPVPLPAGAVLLLGALGGLAVVRHRKRPA CCCEEEEEEEECCCCCEEEEECHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA