Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053287

Identifier: 89053287

GI number: 89053287

Start: 757051

End: 757755

Strand: Direct

Name: 89053287

Synonym: Jann_0796

Alternate gene names: NA

Gene position: 757051-757755 (Clockwise)

Preceding gene: 89053281

Following gene: 89053288

Centisome position: 17.53

GC content: 60.0

Gene sequence:

>705_bases
GTGTTTAAGAAAATTGTAGCTGCAAGTATTGCGGCGGTTGTTTTCGCCGGCGCGGCCCAAGCCGTACCGCTCAGCGGTGT
GTTTGATGTCGTCGCAATTAACGTAACCAATGCGTCACGCGCGCAATCGCAGGCGACGTTCGGGAACTATGTCGATGCGA
TCAATGGCGTCGATACATCGCCCAATACGACGTCGACGTTCGAGACGCATATCTTCAACTACGACGGCATTCTCGATTTT
GACACGCGCGGTGAGCCGTTTTCGCCCCTGACCACGATCAGCCAGTTCCTCTCTACCGGGACCGGGACGCTTATCGGGAT
GGACAACACGTTTGGATCGCTGCGCAACAGCCAGGGCAATATCGACGACGCCACGGCGACGACCACGTTCTACTTTTTCT
CGTTGAAGACCGCGACACCCTACGACCTGACCATTACCCATGACGATGGTGTGGCCGTCTTCAACAACGGAGACTTGCTC
GGCGGATTGGTCGGACCGAATGCCGTTCAACCGGAGCCCACGCTGGTGAACGGCTCTGTCGCGGGCGACCTGAGCTTCCT
TTACGTGTCCACCAACAGCGACCCGTCGGTCTTTATCGTGGACGCCGCCGAAGTGGCTCCGGTGCCGCTGCCTGCGGGCG
CGGTGCTGCTGCTGGGTGCTTTGGGCGGCCTGGCCGTGGTGCGCCATCGCAAGCGCCCCGCCTGA

Upstream 100 bases:

>100_bases
TTTACACTTCTGAATGTGCGGAAGGGATGGCATAAGAGTCTCGCCCGAACGGAGAGGTCGGGACCAAATCGAAAGACAGT
TAACCCAAGGGGAATGTGAA

Downstream 100 bases:

>100_bases
GCGAGGGCTGTGCAGGAGTGGAGGGCCGTCCCATTGGGGGCGGCCTTTTTGCGTGCGGTGATGAGCTGACGGCGTCTGCG
TGATATGCCCGGATGAAACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MFKKIVAASIAAVVFAGAAQAVPLSGVFDVVAINVTNASRAQSQATFGNYVDAINGVDTSPNTTSTFETHIFNYDGILDF
DTRGEPFSPLTTISQFLSTGTGTLIGMDNTFGSLRNSQGNIDDATATTTFYFFSLKTATPYDLTITHDDGVAVFNNGDLL
GGLVGPNAVQPEPTLVNGSVAGDLSFLYVSTNSDPSVFIVDAAEVAPVPLPAGAVLLLGALGGLAVVRHRKRPA

Sequences:

>Translated_234_residues
MFKKIVAASIAAVVFAGAAQAVPLSGVFDVVAINVTNASRAQSQATFGNYVDAINGVDTSPNTTSTFETHIFNYDGILDF
DTRGEPFSPLTTISQFLSTGTGTLIGMDNTFGSLRNSQGNIDDATATTTFYFFSLKTATPYDLTITHDDGVAVFNNGDLL
GGLVGPNAVQPEPTLVNGSVAGDLSFLYVSTNSDPSVFIVDAAEVAPVPLPAGAVLLLGALGGLAVVRHRKRPA
>Mature_234_residues
MFKKIVAASIAAVVFAGAAQAVPLSGVFDVVAINVTNASRAQSQATFGNYVDAINGVDTSPNTTSTFETHIFNYDGILDF
DTRGEPFSPLTTISQFLSTGTGTLIGMDNTFGSLRNSQGNIDDATATTTFYFFSLKTATPYDLTITHDDGVAVFNNGDLL
GGLVGPNAVQPEPTLVNGSVAGDLSFLYVSTNSDPSVFIVDAAEVAPVPLPAGAVLLLGALGGLAVVRHRKRPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24267; Mature: 24267

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKKIVAASIAAVVFAGAAQAVPLSGVFDVVAINVTNASRAQSQATFGNYVDAINGVDTS
CCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCC
PNTTSTFETHIFNYDGILDFDTRGEPFSPLTTISQFLSTGTGTLIGMDNTFGSLRNSQGN
CCCCCEEEEEEECCCCEEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHCCCCCC
IDDATATTTFYFFSLKTATPYDLTITHDDGVAVFNNGDLLGGLVGPNAVQPEPTLVNGSV
CCCCEEEEEEEEEEECCCCCEEEEEECCCCEEEEECCCEEEEECCCCCCCCCCEEECCCC
AGDLSFLYVSTNSDPSVFIVDAAEVAPVPLPAGAVLLLGALGGLAVVRHRKRPA
CCCEEEEEEEECCCCCEEEEECHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MFKKIVAASIAAVVFAGAAQAVPLSGVFDVVAINVTNASRAQSQATFGNYVDAINGVDTS
CCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCC
PNTTSTFETHIFNYDGILDFDTRGEPFSPLTTISQFLSTGTGTLIGMDNTFGSLRNSQGN
CCCCCEEEEEEECCCCEEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHCCCCCC
IDDATATTTFYFFSLKTATPYDLTITHDDGVAVFNNGDLLGGLVGPNAVQPEPTLVNGSV
CCCCEEEEEEEEEEECCCCCEEEEEECCCCEEEEECCCEEEEECCCCCCCCCCEEECCCC
AGDLSFLYVSTNSDPSVFIVDAAEVAPVPLPAGAVLLLGALGGLAVVRHRKRPA
CCCEEEEEEEECCCCCEEEEECHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA