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The map label for this gene is cbbE [H]

Identifier: 89053281

GI number: 89053281

Start: 751119

End: 751799

Strand: Direct

Name: cbbE [H]

Synonym: Jann_0790

Alternate gene names: 89053281

Gene position: 751119-751799 (Clockwise)

Preceding gene: 89053276

Following gene: 89053287

Centisome position: 17.4

GC content: 63.44

Gene sequence:

>681_bases
ATGCCATTTGATCGTTCCATCAAGATCGCTCCGTCGATCCTTGCCGCTGATTTCGCCAATTTCGGGGCAGAGGTCCGCGC
GGTGGAGGATCAGGGCGCGGACTGGATCCATATCGACGTGATGGACGGGCATTTCGTGCCCAACCTGACCTTCGGCCCGC
CGATGGTGAAAGCCCTGCGGCCGCACGTGAAAACAGTCATGGACGTGCATCTGATGATCTCTCCGGTGGATGCCTATATC
GACGCCTACGCCGATGCGGGCGCGGACGTGCTGACCGCCCATGTGGAGGCCGGGCCGCATATTCACCGGACGCTGCAAGC
CATTCGGGGCGCGGGCATGAAGGCGGGCGTGGCGCTGAACCCCGGTACGCCTGCCAGCGCGGTGGCGGAGGTTCTGGACC
TGTGCGATCTGGTCTGTGTGATGACGGTGAACCCTGGCTTCGGGGGGCAGTCGTTCATTGATATGACAGGGAAAATCGCG
GAGCTGCGCACGATGATCGGCGACCGGGAGGTGCATATCGAGATCGACGGCGGCGTGGACGCAAAGACGGCTCCGCTCGT
CGCCCGGGCGGGCGCAGATGTGCTGGTGGCAGGCTCGGCTGTGTTCCGGGGCGGATCAGTGGAAGATCCTGCACCTTACG
GCGAGAATATCCGGACGATCCGAGCCTCCGTGGACGTATGA

Upstream 100 bases:

>100_bases
ATGGCGCGAACGGCTTTCTGGTGCCCCGGGGCGTGACTTCGGATTTGGGGCGCGGTAACAGGCGGGCACCCGTCGGTTTT
TGGCCAGGGAGGCCGCTGCC

Downstream 100 bases:

>100_bases
CCGACGGCGCGCCAAACGCCTAATCAAGCACTTTCGTGGCCTGCATCTTGCGCCTTACAGCGCTGAGTTTCCGGCGCAGA
TCCGTGGTTTCGAGGTGCCG

Product: ribulose-5-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MPFDRSIKIAPSILAADFANFGAEVRAVEDQGADWIHIDVMDGHFVPNLTFGPPMVKALRPHVKTVMDVHLMISPVDAYI
DAYADAGADVLTAHVEAGPHIHRTLQAIRGAGMKAGVALNPGTPASAVAEVLDLCDLVCVMTVNPGFGGQSFIDMTGKIA
ELRTMIGDREVHIEIDGGVDAKTAPLVARAGADVLVAGSAVFRGGSVEDPAPYGENIRTIRASVDV

Sequences:

>Translated_226_residues
MPFDRSIKIAPSILAADFANFGAEVRAVEDQGADWIHIDVMDGHFVPNLTFGPPMVKALRPHVKTVMDVHLMISPVDAYI
DAYADAGADVLTAHVEAGPHIHRTLQAIRGAGMKAGVALNPGTPASAVAEVLDLCDLVCVMTVNPGFGGQSFIDMTGKIA
ELRTMIGDREVHIEIDGGVDAKTAPLVARAGADVLVAGSAVFRGGSVEDPAPYGENIRTIRASVDV
>Mature_225_residues
PFDRSIKIAPSILAADFANFGAEVRAVEDQGADWIHIDVMDGHFVPNLTFGPPMVKALRPHVKTVMDVHLMISPVDAYID
AYADAGADVLTAHVEAGPHIHRTLQAIRGAGMKAGVALNPGTPASAVAEVLDLCDLVCVMTVNPGFGGQSFIDMTGKIAE
LRTMIGDREVHIEIDGGVDAKTAPLVARAGADVLVAGSAVFRGGSVEDPAPYGENIRTIRASVDV

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=216, Percent_Identity=43.9814814814815, Blast_Score=168, Evalue=3e-42,
Organism=Homo sapiens, GI219879828, Length=216, Percent_Identity=43.0555555555556, Blast_Score=160, Evalue=7e-40,
Organism=Homo sapiens, GI24307923, Length=161, Percent_Identity=36.6459627329193, Blast_Score=90, Evalue=2e-18,
Organism=Escherichia coli, GI1789788, Length=224, Percent_Identity=45.0892857142857, Blast_Score=184, Evalue=4e-48,
Organism=Escherichia coli, GI1790523, Length=198, Percent_Identity=39.8989898989899, Blast_Score=142, Evalue=1e-35,
Organism=Escherichia coli, GI1790754, Length=195, Percent_Identity=31.7948717948718, Blast_Score=87, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17552948, Length=201, Percent_Identity=39.3034825870647, Blast_Score=151, Evalue=3e-37,
Organism=Saccharomyces cerevisiae, GI6322341, Length=215, Percent_Identity=42.7906976744186, Blast_Score=170, Evalue=2e-43,
Organism=Drosophila melanogaster, GI24586301, Length=196, Percent_Identity=47.4489795918367, Blast_Score=177, Evalue=7e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 23717; Mature: 23586

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS01085 RIBUL_P_3_EPIMER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFDRSIKIAPSILAADFANFGAEVRAVEDQGADWIHIDVMDGHFVPNLTFGPPMVKALR
CCCCCCEEECHHHHHHHHHHCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCHHHHHHH
PHVKTVMDVHLMISPVDAYIDAYADAGADVLTAHVEAGPHIHRTLQAIRGAGMKAGVALN
HHHHHHHHHHHEEEHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEC
PGTPASAVAEVLDLCDLVCVMTVNPGFGGQSFIDMTGKIAELRTMIGDREVHIEIDGGVD
CCCCHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCC
AKTAPLVARAGADVLVAGSAVFRGGSVEDPAPYGENIRTIRASVDV
CCCCCEEECCCCCEEEECCCEECCCCCCCCCCCCCCEEEEEEECCC
>Mature Secondary Structure 
PFDRSIKIAPSILAADFANFGAEVRAVEDQGADWIHIDVMDGHFVPNLTFGPPMVKALR
CCCCCEEECHHHHHHHHHHCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCHHHHHHH
PHVKTVMDVHLMISPVDAYIDAYADAGADVLTAHVEAGPHIHRTLQAIRGAGMKAGVALN
HHHHHHHHHHHEEEHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEC
PGTPASAVAEVLDLCDLVCVMTVNPGFGGQSFIDMTGKIAELRTMIGDREVHIEIDGGVD
CCCCHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCC
AKTAPLVARAGADVLVAGSAVFRGGSVEDPAPYGENIRTIRASVDV
CCCCCEEECCCCCEEEECCCEECCCCCCCCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA