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The map label for this gene is 88657833

Identifier: 88657833

GI number: 88657833

Start: 1039291

End: 1039902

Strand: Reverse

Name: 88657833

Synonym: ECH_1013

Alternate gene names: NA

Gene position: 1039902-1039291 (Counterclockwise)

Preceding gene: 88658186

Following gene: 88658273

Centisome position: 88.41

GC content: 28.76

Gene sequence:

>612_bases
ATGATAGTTACTAGAATGAGATACCAAATGGATAAGATGGGAATAAATGCGCGTGAATTAGCGCATAAAGCTGATGTTGG
TAAGTCTTTTGTATATGATATATTAAGTGGTAAATCAACGAATCCTACATCTAAAAAATTAATGGCAATAGCGAAGGTAT
TAAACGTTTCATTATCATATTTTATTAGTGATGATAATTATACTTATGGACAGAATAATGTTAATATAATGCCTGTATAT
GATTTAGAATTGGAAAATGGTAAAGTTGCATCCTCAGGTGATGTTAATTTGTATCTCTCTTCAAACATTAATTTAACTTC
TAATATGAAGAATTTACGTGTATATTACGTAAAGGGAGATAGTATGATCCCAACATTAATGAATCAAGATGTAGTTCTAG
TGGATATAGGAGATAAAATTCCTCATCCTGCTGGATTATTTGTTATAGTTGATTCAGTAGGTGTATCAATTAGGAGATTA
GAGTATTTAAAAGATAATCAGAAGATAAAGTTACATGTAGTTTCTGATAATAAAAAATATTCTTCTTATGAGTGTCATTT
AGAAGATATGGAAATATTAGGGAGAATAATTTGGTATGCAAGATCTTTATGA

Upstream 100 bases:

>100_bases
TAATTCAATTATTACTTGAGTTTATGTACTTTAAATTGTACAAAAATGTAATAAATATTAACTGTAAGGTGAATTTATGA
AAACAAGTAGTGATAATAGT

Downstream 100 bases:

>100_bases
GTAAAATAGATATCAAATTTTGAAATTTTTATATTAGTGTGAATGCTTTTATTAATGTATAGTAGTACGTGTGTTAACCA
TTTTTATTATTAATAAAGTA

Product: DNA-binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MIVTRMRYQMDKMGINARELAHKADVGKSFVYDILSGKSTNPTSKKLMAIAKVLNVSLSYFISDDNYTYGQNNVNIMPVY
DLELENGKVASSGDVNLYLSSNINLTSNMKNLRVYYVKGDSMIPTLMNQDVVLVDIGDKIPHPAGLFVIVDSVGVSIRRL
EYLKDNQKIKLHVVSDNKKYSSYECHLEDMEILGRIIWYARSL

Sequences:

>Translated_203_residues
MIVTRMRYQMDKMGINARELAHKADVGKSFVYDILSGKSTNPTSKKLMAIAKVLNVSLSYFISDDNYTYGQNNVNIMPVY
DLELENGKVASSGDVNLYLSSNINLTSNMKNLRVYYVKGDSMIPTLMNQDVVLVDIGDKIPHPAGLFVIVDSVGVSIRRL
EYLKDNQKIKLHVVSDNKKYSSYECHLEDMEILGRIIWYARSL
>Mature_203_residues
MIVTRMRYQMDKMGINARELAHKADVGKSFVYDILSGKSTNPTSKKLMAIAKVLNVSLSYFISDDNYTYGQNNVNIMPVY
DLELENGKVASSGDVNLYLSSNINLTSNMKNLRVYYVKGDSMIPTLMNQDVVLVDIGDKIPHPAGLFVIVDSVGVSIRRL
EYLKDNQKIKLHVVSDNKKYSSYECHLEDMEILGRIIWYARSL

Specific function: Unknown

COG id: COG2932

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22999; Mature: 22999

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: PS50943 HTH_CROC1 ; PS00501 SPASE_I_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVTRMRYQMDKMGINARELAHKADVGKSFVYDILSGKSTNPTSKKLMAIAKVLNVSLSY
CEEEHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCEEEE
FISDDNYTYGQNNVNIMPVYDLELENGKVASSGDVNLYLSSNINLTSNMKNLRVYYVKGD
EECCCCEEECCCCEEEEEEEEEEECCCEEECCCCEEEEEECCCEEECCCCEEEEEEEECC
SMIPTLMNQDVVLVDIGDKIPHPAGLFVIVDSVGVSIRRLEYLKDNQKIKLHVVSDNKKY
CCCHHHCCCCEEEEECCCCCCCCCEEEEEEECCCCEEEEEHHHCCCCEEEEEEEECCCCC
SSYECHLEDMEILGRIIWYARSL
CEEEEEHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIVTRMRYQMDKMGINARELAHKADVGKSFVYDILSGKSTNPTSKKLMAIAKVLNVSLSY
CEEEHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCEEEE
FISDDNYTYGQNNVNIMPVYDLELENGKVASSGDVNLYLSSNINLTSNMKNLRVYYVKGD
EECCCCEEECCCCEEEEEEEEEEECCCEEECCCCEEEEEECCCEEECCCCEEEEEEEECC
SMIPTLMNQDVVLVDIGDKIPHPAGLFVIVDSVGVSIRRLEYLKDNQKIKLHVVSDNKKY
CCCHHHCCCCEEEEECCCCCCCCCEEEEEEECCCCEEEEEHHHCCCCEEEEEEEECCCCC
SSYECHLEDMEILGRIIWYARSL
CEEEEEHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA