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The map label for this gene is petA [H]

Identifier: 88607923

GI number: 88607923

Start: 413710

End: 414279

Strand: Direct

Name: petA [H]

Synonym: APH_0401

Alternate gene names: 88607923

Gene position: 413710-414279 (Clockwise)

Preceding gene: 88607348

Following gene: 88607218

Centisome position: 28.12

GC content: 42.63

Gene sequence:

>570_bases
ATGGCTGATGATGATATTGCTTCTGGTAAGAGTGAAGGTTTTGCTGGAGAAGTACAAAGGAGAGATTTTTTGGGGCTCAC
CACTCTTTTTATGTCATTTATAGGTATTTTTTCTTTTTTATATCCTTTATTCAGATCGTTGAGTCCTTCGGCCGAGGTTA
TGGCCCAATCAACAGTTGAGGTAGATTTAACCAGTATAAAAGAAGGTAGCACCAAGGTTGTTAAGTGGCAGGGCAAGCCT
GTGTTTGTTCGAAGACGTACGAAGGAAGAGATAGAAAAGGCTAGAGCTGTAGATATATCTGGATTGCGTGATCCTCAGAC
TGATCAGCAGCGCACTTTCGTTGGGAAAGAAGAGTGGTTAGTCATGGTAGGTATATGCACTCATCTAGGGTGTGTTCCTA
CGGAGGTTAAAAGTGGTGATAAGGGGTGGTATTGCCCGTGTCATGGTTCGAAATATGACACTTCTGGGAGGATTTTGGCT
GGGCCTGCGCCTTTAAATTTGCCAATACCTGATTATCATTTTGTAGATGATAGTACTATGGTAATTGGCAAGAAGGGTAC
TGCTGTGTAG

Upstream 100 bases:

>100_bases
GCTGCTGCCGGGGTTTGTTTTTGTGGATTGTTTTCCACAGCGTTCTAGTATGTGAATTAGAATATGGGGCTTAAATTTGA
CTAGCGTGAAGGGGAATGAT

Downstream 100 bases:

>100_bases
GGGTAGAGATGCAAAAGAACGAGAATAACGCTGCTGAGTGCGGCAAGGGTGTATTAGCCTGGATAGAGTACAGACTTCCT
GTATGTGCGTTTTTCAGGGA

Product: ubiquinol-cytochrome c reductase, iron-sulfur subunit

Products: NA

Alternate protein names: Rieske iron-sulfur protein; RISP [H]

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MADDDIASGKSEGFAGEVQRRDFLGLTTLFMSFIGIFSFLYPLFRSLSPSAEVMAQSTVEVDLTSIKEGSTKVVKWQGKP
VFVRRRTKEEIEKARAVDISGLRDPQTDQQRTFVGKEEWLVMVGICTHLGCVPTEVKSGDKGWYCPCHGSKYDTSGRILA
GPAPLNLPIPDYHFVDDSTMVIGKKGTAV

Sequences:

>Translated_189_residues
MADDDIASGKSEGFAGEVQRRDFLGLTTLFMSFIGIFSFLYPLFRSLSPSAEVMAQSTVEVDLTSIKEGSTKVVKWQGKP
VFVRRRTKEEIEKARAVDISGLRDPQTDQQRTFVGKEEWLVMVGICTHLGCVPTEVKSGDKGWYCPCHGSKYDTSGRILA
GPAPLNLPIPDYHFVDDSTMVIGKKGTAV
>Mature_188_residues
ADDDIASGKSEGFAGEVQRRDFLGLTTLFMSFIGIFSFLYPLFRSLSPSAEVMAQSTVEVDLTSIKEGSTKVVKWQGKPV
FVRRRTKEEIEKARAVDISGLRDPQTDQQRTFVGKEEWLVMVGICTHLGCVPTEVKSGDKGWYCPCHGSKYDTSGRILAG
PAPLNLPIPDYHFVDDSTMVIGKKGTAV

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Homo sapiens, GI163644321, Length=138, Percent_Identity=52.8985507246377, Blast_Score=165, Evalue=3e-41,
Organism=Caenorhabditis elegans, GI17540418, Length=173, Percent_Identity=46.8208092485549, Blast_Score=157, Evalue=3e-39,
Organism=Saccharomyces cerevisiae, GI6320811, Length=178, Percent_Identity=47.752808988764, Blast_Score=168, Evalue=4e-43,
Organism=Drosophila melanogaster, GI24580896, Length=139, Percent_Identity=53.9568345323741, Blast_Score=161, Evalue=2e-40,
Organism=Drosophila melanogaster, GI17864350, Length=120, Percent_Identity=37.5, Blast_Score=75, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR014349
- InterPro:   IPR005805
- InterPro:   IPR006311
- InterPro:   IPR019470
- InterPro:   IPR006317 [H]

Pfam domain/function: PF00355 Rieske; PF10399 UCR_Fe-S_N [H]

EC number: =1.10.2.2 [H]

Molecular weight: Translated: 20826; Mature: 20695

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: PS00199 RIESKE_1 ; PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADDDIASGKSEGFAGEVQRRDFLGLTTLFMSFIGIFSFLYPLFRSLSPSAEVMAQSTVE
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEE
VDLTSIKEGSTKVVKWQGKPVFVRRRTKEEIEKARAVDISGLRDPQTDQQRTFVGKEEWL
EEEECCCCCCCEEEEECCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCHHE
VMVGICTHLGCVPTEVKSGDKGWYCPCHGSKYDTSGRILAGPAPLNLPIPDYHFVDDSTM
EEEEHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEECCCCCCCCCCCEEEECCCEE
VIGKKGTAV
EEECCCCCC
>Mature Secondary Structure 
ADDDIASGKSEGFAGEVQRRDFLGLTTLFMSFIGIFSFLYPLFRSLSPSAEVMAQSTVE
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEE
VDLTSIKEGSTKVVKWQGKPVFVRRRTKEEIEKARAVDISGLRDPQTDQQRTFVGKEEWL
EEEECCCCCCCEEEEECCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCHHE
VMVGICTHLGCVPTEVKSGDKGWYCPCHGSKYDTSGRILAGPAPLNLPIPDYHFVDDSTM
EEEEHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEECCCCCCCCCCCEEEECCCEE
VIGKKGTAV
EEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2176269 [H]