Click here to switch to the map view.

The map label for this gene is 88607348

Identifier: 88607348

GI number: 88607348

Start: 412643

End: 413407

Strand: Direct

Name: 88607348

Synonym: APH_0400

Alternate gene names: NA

Gene position: 412643-413407 (Clockwise)

Preceding gene: 88606800

Following gene: 88607923

Centisome position: 28.05

GC content: 37.39

Gene sequence:

>765_bases
ATGTGGCTGTTGAGCGGGAGTAGCAAGAAAATTATCGGCAAAATTTTGGCAATTTTGGGTTTAGCAACGGCGCTTTTTTT
GGTTATTAAATGTTCAACAGGTAAGCGTGATACACATGACAAAATTCGGAAAAGGTGTGCGGTGTTACGAAATGAGCTAG
ATGGCAATCGCATAAAGTTATTGATTTTGGAAAGACGGGTGAAAGACCACTTTTCATTATTTTGCCTTGGTAATACAATC
AATCTGGGTATATCTCAGGGATTAGTAGAGTTTGCAAATTGTAATGTAGAAAAAAGCAAACAGACATGCATAAAGGTTTA
TCGGGGAGTGCTTGTACTGACAATTGTTAAGATGTTTGCTTTGATGGTTTCTAAGTGGGTTTCTGAGTCACATCTGCTTA
AACCTGAAACTGCAAAGTCTATAGATGTGGCTTTTAGGGTGACTTTATTGGTATTTTGCATTTTGGCTGCATATGCCATG
AGGTTTGTATTTTCTGAATATATGCGTTCCTGGAATAAATTGGCTAAGAAGCTGAGTAAAGCACTGGAAAAAGAAGAGAA
CAGGTATTGCAAATTGGTTAGTGGGATTGAAACATATAACAATTTTCCTGAACACATAAAGTACGGTATTCGGGTATCTG
ATCATTTTACTTCATTAGTTATGGGGCGTATTTTATCAGGTTCATTGACGAGTAAGGCTGCTCAAAAGATATTGAAGGCA
GTCGAAGATGAGATGTCTAGAGCTTCAAGACTTATGAATTCATGA

Upstream 100 bases:

>100_bases
TTTGAGAAATTTTGGACTTGAATTATGCTACATGAACTGATAGTTACGCCGCTAAGCAACTCGGATTGGCGATACGGTTG
CATACGATAAGGGGGATGGT

Downstream 100 bases:

>100_bases
TTCATTATGGTATTTGTATCAATTAGGCTATTATTGAGCATATCAGCCTAGTTACTGAGTTTATATAAATGCATTTATTT
ATATGCTCTTTACTATTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MWLLSGSSKKIIGKILAILGLATALFLVIKCSTGKRDTHDKIRKRCAVLRNELDGNRIKLLILERRVKDHFSLFCLGNTI
NLGISQGLVEFANCNVEKSKQTCIKVYRGVLVLTIVKMFALMVSKWVSESHLLKPETAKSIDVAFRVTLLVFCILAAYAM
RFVFSEYMRSWNKLAKKLSKALEKEENRYCKLVSGIETYNNFPEHIKYGIRVSDHFTSLVMGRILSGSLTSKAAQKILKA
VEDEMSRASRLMNS

Sequences:

>Translated_254_residues
MWLLSGSSKKIIGKILAILGLATALFLVIKCSTGKRDTHDKIRKRCAVLRNELDGNRIKLLILERRVKDHFSLFCLGNTI
NLGISQGLVEFANCNVEKSKQTCIKVYRGVLVLTIVKMFALMVSKWVSESHLLKPETAKSIDVAFRVTLLVFCILAAYAM
RFVFSEYMRSWNKLAKKLSKALEKEENRYCKLVSGIETYNNFPEHIKYGIRVSDHFTSLVMGRILSGSLTSKAAQKILKA
VEDEMSRASRLMNS
>Mature_254_residues
MWLLSGSSKKIIGKILAILGLATALFLVIKCSTGKRDTHDKIRKRCAVLRNELDGNRIKLLILERRVKDHFSLFCLGNTI
NLGISQGLVEFANCNVEKSKQTCIKVYRGVLVLTIVKMFALMVSKWVSESHLLKPETAKSIDVAFRVTLLVFCILAAYAM
RFVFSEYMRSWNKLAKKLSKALEKEENRYCKLVSGIETYNNFPEHIKYGIRVSDHFTSLVMGRILSGSLTSKAAQKILKA
VEDEMSRASRLMNS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28744; Mature: 28744

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWLLSGSSKKIIGKILAILGLATALFLVIKCSTGKRDTHDKIRKRCAVLRNELDGNRIKL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEE
LILERRVKDHFSLFCLGNTINLGISQGLVEFANCNVEKSKQTCIKVYRGVLVLTIVKMFA
HHHHHHHHHHHEEEEECCCHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LMVSKWVSESHLLKPETAKSIDVAFRVTLLVFCILAAYAMRFVFSEYMRSWNKLAKKLSK
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALEKEENRYCKLVSGIETYNNFPEHIKYGIRVSDHFTSLVMGRILSGSLTSKAAQKILKA
HHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
VEDEMSRASRLMNS
HHHHHHHHHHHHCC
>Mature Secondary Structure
MWLLSGSSKKIIGKILAILGLATALFLVIKCSTGKRDTHDKIRKRCAVLRNELDGNRIKL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEE
LILERRVKDHFSLFCLGNTINLGISQGLVEFANCNVEKSKQTCIKVYRGVLVLTIVKMFA
HHHHHHHHHHHEEEEECCCHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LMVSKWVSESHLLKPETAKSIDVAFRVTLLVFCILAAYAMRFVFSEYMRSWNKLAKKLSK
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALEKEENRYCKLVSGIETYNNFPEHIKYGIRVSDHFTSLVMGRILSGSLTSKAAQKILKA
HHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
VEDEMSRASRLMNS
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA