Definition | Anaplasma phagocytophilum HZ, complete genome. |
---|---|
Accession | NC_007797 |
Length | 1,471,282 |
Click here to switch to the map view.
The map label for this gene is 88607385
Identifier: 88607385
GI number: 88607385
Start: 1025421
End: 1025612
Strand: Reverse
Name: 88607385
Synonym: APH_0963
Alternate gene names: NA
Gene position: 1025612-1025421 (Counterclockwise)
Preceding gene: 88606732
Following gene: 88607857
Centisome position: 69.71
GC content: 40.1
Gene sequence:
>192_bases GTGTTGGGAAGGGGCTGCTGTTTATATGGTTGTGCTCTGCGTAGGGCTAAAAAGTATGGGCGGTTTTTGACAACATGTAA GGCAGATTTATGCTTTTACGGTTTTTTACTATTACATATACGTGGAATAGGCATTCCTAGAAATGTACGTGTATTGCTGC ATGGTGAGAAATTGACAATGTTTTCCTTCTAG
Upstream 100 bases:
>100_bases TTTTAGTATGCGCACAATGATAGGGGGCTTGCTTATTGTCCTAGAAAAATAAAAGGTAAACTTGCTCTTCTCCAGGTAAT ATTGAGGAATAATATTCCGC
Downstream 100 bases:
>100_bases AATAGCATAGGGCCATGGGTAGAAATTTAGATATGCTTATGTCTATGGGCTTTGTGGTGGCGGCTTTTTACCGTTTTGTC CACTTGCATAATTACTATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 63; Mature: 63
Protein sequence:
>63_residues MLGRGCCLYGCALRRAKKYGRFLTTCKADLCFYGFLLLHIRGIGIPRNVRVLLHGEKLTMFSF
Sequences:
>Translated_63_residues MLGRGCCLYGCALRRAKKYGRFLTTCKADLCFYGFLLLHIRGIGIPRNVRVLLHGEKLTMFSF >Mature_63_residues MLGRGCCLYGCALRRAKKYGRFLTTCKADLCFYGFLLLHIRGIGIPRNVRVLLHGEKLTMFSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7200; Mature: 7200
Theoretical pI: Translated: 10.37; Mature: 10.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 11.1 %Cys+Met (Translated Protein) 7.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 11.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGRGCCLYGCALRRAKKYGRFLTTCKADLCFYGFLLLHIRGIGIPRNVRVLLHGEKLTM CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEE FSF ECC >Mature Secondary Structure MLGRGCCLYGCALRRAKKYGRFLTTCKADLCFYGFLLLHIRGIGIPRNVRVLLHGEKLTM CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEE FSF ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA