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The map label for this gene is yceA [C]

Identifier: 88607857

GI number: 88607857

Start: 1024549

End: 1025388

Strand: Reverse

Name: yceA [C]

Synonym: APH_0962

Alternate gene names: 88607857

Gene position: 1025388-1024549 (Counterclockwise)

Preceding gene: 88607385

Following gene: 88607313

Centisome position: 69.69

GC content: 41.79

Gene sequence:

>840_bases
ATGCTTATGTCTATGGGCTTTGTGGTGGCGGCTTTTTACCGTTTTGTCCACTTGCATAATTACTATGACATGCGGTCTGT
GATACTGGAATTTTGTCAGGAGCATGGCATAAAGGGAACGGTAATATTGGCAGAACAAGGTATAAATGCGACTATTTCTG
GGGAGCGGGACGCTATAAATAAGTTTTTCTCTTTTTTAGATTTGGACCATAGATTAGCCGATATGAAATACCACGAAAGC
TATTCTAGTAGGCTGCCTTTTTCTAAAATGAAGGTACGTTTGAAAAAAGAAGTTGTTAGACTTGGCATCGACGATTTTGA
CTGTTCTTCGATGAGGGGGGAGTATGTGGACCCTAAAGCGTGGAATGATCTCATAACTAAGCCTGGTATGCATGTTATTG
ATACCAGGAATGACTATGAGATAAAGTTTGGTAGATTTAAGCACTCTATAAATCCAGGGACTACTTCTTTTAGGGAGTTT
CCTGATTGGGCTAGAAAGTGGGCTGAAGGCAAAGATAAGGATGTAGGTGTGGCTATGTACTGCACTGGTGGGATAAGATG
TGAGAAGTCCACTGCGTTTCTTAAGAGCTTAGGGTTTGAGAATGTGTATCACCTTAAGGGAGGCATCTTGAATTATCTGC
AGTCTGTCAAAGGGGCTGATAGCTTATGGGAGGGGGACTGCTTTGTTTTTGATGAGCGTGTTGCAGTAGATAATAACATT
GCTCCCAGCGAGGATATTAAGTGCGTAAAGTGTTTTGGCAAGGTAGATGAAGCTGATTTGCGATCTGTTTCCAAGGGACA
TATTGTATGTGGTGCTTGTAAATCTGCAGACGTATCGTAA

Upstream 100 bases:

>100_bases
GAATAGGCATTCCTAGAAATGTACGTGTATTGCTGCATGGTGAGAAATTGACAATGTTTTCCTTCTAGAATAGCATAGGG
CCATGGGTAGAAATTTAGAT

Downstream 100 bases:

>100_bases
GAGAAGATATAGATTTTAACTGTATTATTTGTGGAATGGTTTGCCTTTTTAGGGTAGGGTGAATTGCCAGAGCGTAGGGG
CTTAGCCATGTTAGCACCTA

Product: rhodanese domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MLMSMGFVVAAFYRFVHLHNYYDMRSVILEFCQEHGIKGTVILAEQGINATISGERDAINKFFSFLDLDHRLADMKYHES
YSSRLPFSKMKVRLKKEVVRLGIDDFDCSSMRGEYVDPKAWNDLITKPGMHVIDTRNDYEIKFGRFKHSINPGTTSFREF
PDWARKWAEGKDKDVGVAMYCTGGIRCEKSTAFLKSLGFENVYHLKGGILNYLQSVKGADSLWEGDCFVFDERVAVDNNI
APSEDIKCVKCFGKVDEADLRSVSKGHIVCGACKSADVS

Sequences:

>Translated_279_residues
MLMSMGFVVAAFYRFVHLHNYYDMRSVILEFCQEHGIKGTVILAEQGINATISGERDAINKFFSFLDLDHRLADMKYHES
YSSRLPFSKMKVRLKKEVVRLGIDDFDCSSMRGEYVDPKAWNDLITKPGMHVIDTRNDYEIKFGRFKHSINPGTTSFREF
PDWARKWAEGKDKDVGVAMYCTGGIRCEKSTAFLKSLGFENVYHLKGGILNYLQSVKGADSLWEGDCFVFDERVAVDNNI
APSEDIKCVKCFGKVDEADLRSVSKGHIVCGACKSADVS
>Mature_279_residues
MLMSMGFVVAAFYRFVHLHNYYDMRSVILEFCQEHGIKGTVILAEQGINATISGERDAINKFFSFLDLDHRLADMKYHES
YSSRLPFSKMKVRLKKEVVRLGIDDFDCSSMRGEYVDPKAWNDLITKPGMHVIDTRNDYEIKFGRFKHSINPGTTSFREF
PDWARKWAEGKDKDVGVAMYCTGGIRCEKSTAFLKSLGFENVYHLKGGILNYLQSVKGADSLWEGDCFVFDERVAVDNNI
APSEDIKCVKCFGKVDEADLRSVSKGHIVCGACKSADVS

Specific function: Unknown. [C]

COG id: COG1054

COG function: function code R; Predicted sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain

Homologues:

Organism=Homo sapiens, GI111038120, Length=264, Percent_Identity=30.6818181818182, Blast_Score=104, Evalue=7e-23,
Organism=Escherichia coli, GI1787294, Length=231, Percent_Identity=32.9004329004329, Blast_Score=115, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y962_ANAPZ (Q2GJC1)

Other databases:

- EMBL:   CP000235
- RefSeq:   YP_505530.1
- ProteinModelPortal:   Q2GJC1
- STRING:   Q2GJC1
- GeneID:   3930727
- GenomeReviews:   CP000235_GR
- KEGG:   aph:APH_0962
- NMPDR:   fig|212042.5.peg.909
- TIGR:   APH_0962
- eggNOG:   COG1054
- HOGENOM:   HBG366219
- OMA:   ARNDYEY
- PhylomeDB:   Q2GJC1
- ProtClustDB:   CLSK749652
- BioCyc:   APHA212042:APH_0962-MONOMER
- HAMAP:   MF_00469
- InterPro:   IPR001763
- InterPro:   IPR020936
- Gene3D:   G3DSA:3.40.250.10
- SMART:   SM00450

Pfam domain/function: PF00581 Rhodanese; SSF52821 Rhodanese-like

EC number: NA

Molecular weight: Translated: 31628; Mature: 31628

Theoretical pI: Translated: 7.21; Mature: 7.21

Prosite motif: PS50206 RHODANESE_3

Important sites: ACT_SITE 181-181

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMSMGFVVAAFYRFVHLHNYYDMRSVILEFCQEHGIKGTVILAEQGINATISGERDAIN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEECCCHHHHH
KFFSFLDLDHRLADMKYHESYSSRLPFSKMKVRLKKEVVRLGIDDFDCSSMRGEYVDPKA
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCHH
WNDLITKPGMHVIDTRNDYEIKFGRFKHSINPGTTSFREFPDWARKWAEGKDKDVGVAMY
HHHHHCCCCCEEEECCCCCEEEEEEEEECCCCCCCHHHHCHHHHHHHCCCCCCCCCEEEE
CTGGIRCEKSTAFLKSLGFENVYHLKGGILNYLQSVKGADSLWEGDCFVFDERVAVDNNI
ECCCEEECHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECEEEECCCC
APSEDIKCVKCFGKVDEADLRSVSKGHIVCGACKSADVS
CCCCCCHHHHHHCCCCHHHHHHCCCCCEEEECCCCCCCC
>Mature Secondary Structure
MLMSMGFVVAAFYRFVHLHNYYDMRSVILEFCQEHGIKGTVILAEQGINATISGERDAIN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEECCCHHHHH
KFFSFLDLDHRLADMKYHESYSSRLPFSKMKVRLKKEVVRLGIDDFDCSSMRGEYVDPKA
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCHH
WNDLITKPGMHVIDTRNDYEIKFGRFKHSINPGTTSFREFPDWARKWAEGKDKDVGVAMY
HHHHHCCCCCEEEECCCCCEEEEEEEEECCCCCCCHHHHCHHHHHHHCCCCCCCCCEEEE
CTGGIRCEKSTAFLKSLGFENVYHLKGGILNYLQSVKGADSLWEGDCFVFDERVAVDNNI
ECCCEEECHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECEEEECCCC
APSEDIKCVKCFGKVDEADLRSVSKGHIVCGACKSADVS
CCCCCCHHHHHHCCCCHHHHHHCCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA