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The map label for this gene is 88607261

Identifier: 88607261

GI number: 88607261

Start: 337998

End: 338834

Strand: Direct

Name: 88607261

Synonym: APH_0351

Alternate gene names: NA

Gene position: 337998-338834 (Clockwise)

Preceding gene: 88607820

Following gene: 88607178

Centisome position: 22.97

GC content: 41.7

Gene sequence:

>837_bases
ATGTTGGACTCTTTGCTTGTTTTTGACATAGAAACTATTCCGGATACTGATAGCTGTAATAATCTTATAGGTGAGACAGT
TGGTGAGGATGACGATATTTTAGCCAAAAGGGAAGCTATGGCGAACTATCACCTTGATATTACTAATGGGCAGAATTCAT
TTTTGCGACAGCCATTTCACAAGATAGTAGCTATTAGCTTTTTGCGTGCCGATATCAAGAGAGGTGGCGGCTATGAGTCT
TTTACTTTACAGGAAATACGTTCTGGTGGTACGGCTCTTTCTTCGGAACAGGAGTTAGTTAAGGGTTTTTTGAGTTACGT
TTCTGCCATCAAACCGCGATTTGTTACGTTCAATGGCAGAACTTTTGATTTTCCGGTGCTTAAATACAGGGCTATGCTCC
ACGGGGTGCAGGCAGGGTATTTGTACAAAGCTGGGGACAAGTGGAATAATTACTTTCAGAGGTATAGCGTAGATTGGCAC
TGTGATTTGTTAGATTACCTTTCGGAGTATGGTGCATCTGCCAAAGTTAAGATGCATGAGGTCTGTGCGGTTATGGGCTT
TCCTGGGAAGTTCGGTACGGATGGTTCTGCTGTTGCGGAATTGTATGATAATGGCAAGTTATCCATGATTCGTGACTATT
GCGAGACTGATGTGATAAATACTTATCTTGTGTATTTAAGGCTTATGCAGCATCAGGAGAAGATCAAAACAGATTGCTAC
AACAGTTGCATTGTTTCCTTGCTTGAGTATTTAAGTAAGAGTGAGAAGGAGCATTTATTAGCCTTTAAAGCGGCTTGGGA
GAAGGTTTCCCAAGGGAAGTTTTTATTGACGCCGTAG

Upstream 100 bases:

>100_bases
TCTGGAAGAATGTGTTGGATACTCATGATTCACAGAGGAAGCGATTTGCGTATTTATCTTGCGGGTTAATAACCGCTGTG
TAGGAATATGGGTACATATA

Downstream 100 bases:

>100_bases
GCGGCAGAGTGTGGCGCTTACGTCGCATTGTACGTGGGTTGAATAGCTGAAATTCTGCAATATGGTTAGGGTGTATTCTT
ATCACATGGACATTAGAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: 3-5' Exonuclease PolB-Like Protein; Polysaccharide Biosynthesis Protein; Propable PolB; Polysaccharide Biosynthesis Protein WlaX; Lipoprotein SmpA/OmlA Family; 3&Apos; Large-Conductance Mechanosensitive Channel

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MLDSLLVFDIETIPDTDSCNNLIGETVGEDDDILAKREAMANYHLDITNGQNSFLRQPFHKIVAISFLRADIKRGGGYES
FTLQEIRSGGTALSSEQELVKGFLSYVSAIKPRFVTFNGRTFDFPVLKYRAMLHGVQAGYLYKAGDKWNNYFQRYSVDWH
CDLLDYLSEYGASAKVKMHEVCAVMGFPGKFGTDGSAVAELYDNGKLSMIRDYCETDVINTYLVYLRLMQHQEKIKTDCY
NSCIVSLLEYLSKSEKEHLLAFKAAWEKVSQGKFLLTP

Sequences:

>Translated_278_residues
MLDSLLVFDIETIPDTDSCNNLIGETVGEDDDILAKREAMANYHLDITNGQNSFLRQPFHKIVAISFLRADIKRGGGYES
FTLQEIRSGGTALSSEQELVKGFLSYVSAIKPRFVTFNGRTFDFPVLKYRAMLHGVQAGYLYKAGDKWNNYFQRYSVDWH
CDLLDYLSEYGASAKVKMHEVCAVMGFPGKFGTDGSAVAELYDNGKLSMIRDYCETDVINTYLVYLRLMQHQEKIKTDCY
NSCIVSLLEYLSKSEKEHLLAFKAAWEKVSQGKFLLTP
>Mature_278_residues
MLDSLLVFDIETIPDTDSCNNLIGETVGEDDDILAKREAMANYHLDITNGQNSFLRQPFHKIVAISFLRADIKRGGGYES
FTLQEIRSGGTALSSEQELVKGFLSYVSAIKPRFVTFNGRTFDFPVLKYRAMLHGVQAGYLYKAGDKWNNYFQRYSVDWH
CDLLDYLSEYGASAKVKMHEVCAVMGFPGKFGTDGSAVAELYDNGKLSMIRDYCETDVINTYLVYLRLMQHQEKIKTDCY
NSCIVSLLEYLSKSEKEHLLAFKAAWEKVSQGKFLLTP

Specific function: Unknown

COG id: COG3298

COG function: function code L; Predicted 3'-5' exonuclease related to the exonuclease domain of PolB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31559; Mature: 31559

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDSLLVFDIETIPDTDSCNNLIGETVGEDDDILAKREAMANYHLDITNGQNSFLRQPFH
CCCCEEEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHEEEEEECCCHHHHHHHHH
KIVAISFLRADIKRGGGYESFTLQEIRSGGTALSSEQELVKGFLSYVSAIKPRFVTFNGR
HHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCC
TFDFPVLKYRAMLHGVQAGYLYKAGDKWNNYFQRYSVDWHCDLLDYLSEYGASAKVKMHE
EECHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCHHHH
VCAVMGFPGKFGTDGSAVAELYDNGKLSMIRDYCETDVINTYLVYLRLMQHQEKIKTDCY
HHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NSCIVSLLEYLSKSEKEHLLAFKAAWEKVSQGKFLLTP
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEECC
>Mature Secondary Structure
MLDSLLVFDIETIPDTDSCNNLIGETVGEDDDILAKREAMANYHLDITNGQNSFLRQPFH
CCCCEEEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHEEEEEECCCHHHHHHHHH
KIVAISFLRADIKRGGGYESFTLQEIRSGGTALSSEQELVKGFLSYVSAIKPRFVTFNGR
HHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCC
TFDFPVLKYRAMLHGVQAGYLYKAGDKWNNYFQRYSVDWHCDLLDYLSEYGASAKVKMHE
EECHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCHHHH
VCAVMGFPGKFGTDGSAVAELYDNGKLSMIRDYCETDVINTYLVYLRLMQHQEKIKTDCY
HHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NSCIVSLLEYLSKSEKEHLLAFKAAWEKVSQGKFLLTP
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA