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The map label for this gene is 88607178

Identifier: 88607178

GI number: 88607178

Start: 341471

End: 341968

Strand: Direct

Name: 88607178

Synonym: APH_0352

Alternate gene names: NA

Gene position: 341471-341968 (Clockwise)

Preceding gene: 88607261

Following gene: 88606716

Centisome position: 23.21

GC content: 40.76

Gene sequence:

>498_bases
ATGAAGTCTGCTAAGTATGTAGTTTTTTGGCTAGGATTAACCATAGGGCTTGCCTTTGTGTTTGATCTGAAGAATAAAAT
GCATCAACACATGGGTGCAACGGCCGTTAGTGTAGCATCTCAGGCTTATGGTGTAGGGGCTTCTGTGCGTAAGTCCAGCG
ACGGACATTTTTATGTATTTGCATCTATTAACGGAGAAAATATAAAATTTCTTGTTGATACCGGAGCAACTGATGTTGTG
CTTTCACACAAAGATGCACAGAGGATAGGCGCACACATGCGTCCCTCAAAGACGTCAAAAACTTATCATACTGCAAATGG
TGCCATACAAGCCCAATACTTTTTAATACCTGAGATGAAAGTTGGCGCCTTGATAGCCAGAAACGTTGGTGCAAGTATTA
GCACTTCTCAGCTAGAGACATCTTTGTTGGGAATGAGCTTTTTGAAGAATTTCCGCTTTGTGATGAAAAAAGATGAGCTT
GTTCTATACCAAGATTAA

Upstream 100 bases:

>100_bases
GCGCTACTACGGCGTTTTATTCTAGAATAGATTCTCATTTAGGTTTGCACTGTTCAGTTATTGGGTGGTATTGTGAAAGC
ACCTTAGGAGGTATTTTTGG

Downstream 100 bases:

>100_bases
AACGTCTTGGGTATTTTCTAATACCGTGCACACAACACGCTTCTATCCCCCGTTTTTCGAGAAGAATTACCGATTTGTTA
CATGATTGATACGAAAGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MKSAKYVVFWLGLTIGLAFVFDLKNKMHQHMGATAVSVASQAYGVGASVRKSSDGHFYVFASINGENIKFLVDTGATDVV
LSHKDAQRIGAHMRPSKTSKTYHTANGAIQAQYFLIPEMKVGALIARNVGASISTSQLETSLLGMSFLKNFRFVMKKDEL
VLYQD

Sequences:

>Translated_165_residues
MKSAKYVVFWLGLTIGLAFVFDLKNKMHQHMGATAVSVASQAYGVGASVRKSSDGHFYVFASINGENIKFLVDTGATDVV
LSHKDAQRIGAHMRPSKTSKTYHTANGAIQAQYFLIPEMKVGALIARNVGASISTSQLETSLLGMSFLKNFRFVMKKDEL
VLYQD
>Mature_165_residues
MKSAKYVVFWLGLTIGLAFVFDLKNKMHQHMGATAVSVASQAYGVGASVRKSSDGHFYVFASINGENIKFLVDTGATDVV
LSHKDAQRIGAHMRPSKTSKTYHTANGAIQAQYFLIPEMKVGALIARNVGASISTSQLETSLLGMSFLKNFRFVMKKDEL
VLYQD

Specific function: Unknown

COG id: COG3577

COG function: function code R; Predicted aspartyl protease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018061
- InterPro:   IPR011969
- InterPro:   IPR021109
- InterPro:   IPR001969 [H]

Pfam domain/function: PF00077 RVP [H]

EC number: NA

Molecular weight: Translated: 18084; Mature: 18084

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: PS00141 ASP_PROTEASE ; PS50175 ASP_PROT_RETROV

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSAKYVVFWLGLTIGLAFVFDLKNKMHQHMGATAVSVASQAYGVGASVRKSSDGHFYVF
CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEECCCCCEEEE
ASINGENIKFLVDTGATDVVLSHKDAQRIGAHMRPSKTSKTYHTANGAIQAQYFLIPEMK
EEECCCCEEEEEECCCCEEEEECCCHHHHCCCCCCCCCCCEEEECCCCEEEEEEEECCCH
VGALIARNVGASISTSQLETSLLGMSFLKNFRFVMKKDELVLYQD
HHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCEEEEEC
>Mature Secondary Structure
MKSAKYVVFWLGLTIGLAFVFDLKNKMHQHMGATAVSVASQAYGVGASVRKSSDGHFYVF
CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEECCCCCEEEE
ASINGENIKFLVDTGATDVVLSHKDAQRIGAHMRPSKTSKTYHTANGAIQAQYFLIPEMK
EEECCCCEEEEEECCCCEEEEECCCHHHHCCCCCCCCCCCEEEECCCCEEEEEEEECCCH
VGALIARNVGASISTSQLETSLLGMSFLKNFRFVMKKDELVLYQD
HHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]