| Definition | Anaplasma phagocytophilum HZ, complete genome. |
|---|---|
| Accession | NC_007797 |
| Length | 1,471,282 |
Click here to switch to the map view.
The map label for this gene is 88607114
Identifier: 88607114
GI number: 88607114
Start: 187072
End: 187473
Strand: Reverse
Name: 88607114
Synonym: APH_0186
Alternate gene names: NA
Gene position: 187473-187072 (Counterclockwise)
Preceding gene: 88607019
Following gene: 88607802
Centisome position: 12.74
GC content: 43.53
Gene sequence:
>402_bases GTGGGGACCATACCAATAACGTTTGTTACACGCGGCAATGATCTTGCGTCCTTCCTTTCGTTGTTTGTTGTTGCCTGTTG TTACTACGTATATTCTATCCCATCACTTGGACAAAAAATCATGAATATTTGTCCTGTGCTGCGTTGTGGGAGGCCCATAA ACCCTCTAATAGCCTTTGATAGAATCGCGCTACAGTTTTTGTGCCCGGCCATTGCTATGCTATTGCTGCAAATTATCAGC ATTGCTGACCCAGGCGGTACGGTTGTTGCCACTGTACTACTCCTACACTCAAGTGTAGTACTGCTTTGGGCCTATTGGTA TGTATCAGCAGTGTTCTCTTCACAAAAACAAACTTTGCATGATTCACTATGCGGTACCATTGTTATTGTAAAACGAACTT GA
Upstream 100 bases:
>100_bases CTTTATGGCAAATTTGTTGTGTTAAGCCATGGAATCTTTAGTGCTCGCAAACCCTTTAAGGAGACTTATAGCTAGTCTCA TAGATATCATAATAATATCA
Downstream 100 bases:
>100_bases TTTTTTGATTACTAAAACACAATCACAGCGTAAAGAAAGCAGTGCATGTAGCTGCTTTCAAATAATTGCCCAGTGCCAGA GTAAACACACGTAGGTCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MGTIPITFVTRGNDLASFLSLFVVACCYYVYSIPSLGQKIMNICPVLRCGRPINPLIAFDRIALQFLCPAIAMLLLQIIS IADPGGTVVATVLLLHSSVVLLWAYWYVSAVFSSQKQTLHDSLCGTIVIVKRT
Sequences:
>Translated_133_residues MGTIPITFVTRGNDLASFLSLFVVACCYYVYSIPSLGQKIMNICPVLRCGRPINPLIAFDRIALQFLCPAIAMLLLQIIS IADPGGTVVATVLLLHSSVVLLWAYWYVSAVFSSQKQTLHDSLCGTIVIVKRT >Mature_132_residues GTIPITFVTRGNDLASFLSLFVVACCYYVYSIPSLGQKIMNICPVLRCGRPINPLIAFDRIALQFLCPAIAMLLLQIISI ADPGGTVVATVLLLHSSVVLLWAYWYVSAVFSSQKQTLHDSLCGTIVIVKRT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14551; Mature: 14419
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTIPITFVTRGNDLASFLSLFVVACCYYVYSIPSLGQKIMNICPVLRCGRPINPLIAFD CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHH RIALQFLCPAIAMLLLQIISIADPGGTVVATVLLLHSSVVLLWAYWYVSAVFSSQKQTLH HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DSLCGTIVIVKRT HHHCCEEEEEECC >Mature Secondary Structure GTIPITFVTRGNDLASFLSLFVVACCYYVYSIPSLGQKIMNICPVLRCGRPINPLIAFD CCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHH RIALQFLCPAIAMLLLQIISIADPGGTVVATVLLLHSSVVLLWAYWYVSAVFSSQKQTLH HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DSLCGTIVIVKRT HHHCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA