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The map label for this gene is 88607025

Identifier: 88607025

GI number: 88607025

Start: 496085

End: 497470

Strand: Direct

Name: 88607025

Synonym: APH_0469

Alternate gene names: NA

Gene position: 496085-497470 (Clockwise)

Preceding gene: 88607753

Following gene: 88606922

Centisome position: 33.72

GC content: 40.98

Gene sequence:

>1386_bases
GTGGAAAACTCCCTACTGAAGATAAAATACAGGACGATTAGCAGTGTAGTTAAGGTATTTGACGAGGTGACCGACGTTGT
ATTATCGTGGGTTGGTAATATAGGCAAAGACTTATCTAGGAAGCAAGATATAGACAATCTCTTGAGCAAGATGCGCGAGT
GCGTAAGCCCAAAGGGAGGGGAAGTTAAGGCTAGATACAATACTATATCGTTGGGTAATCTTTATCTACAGCTGTCTGAT
GTGGGCAAGGCAAGGTTCTTGCGGATGTTGAACGATAGATTCAACTCTACACAGGAAGAAGTAGATAGCAAGATTAGTGA
GTATGTTAATAATACAGACAGTGCTCTAGAAGAAAAGCTTAGATTCGAGCTGATTTCAGTTTTGTCCTCTCCTAGGCTGA
GTATCTTAAAGCAGTTTATGTCCTTATCTGAAGGGGTGAAATTTCTTGTAGATATGAGGGCGGATGCTATTACGCTTTCG
AGAAAGGGGGAGAATTTTTTCGCATTGGAGAGAGATCTAAAAGGAGTACTTTCTTCGTTATTTGATGTGGGCTTATTAGA
GCTGCGTCACATCACTTGGGATTCTCCTGCGTCACTGTTGGAAAAGCTCATATTTTATGAAGCAGTGCATGCGATTTCTT
CGTGGGAGGATTTGCGTCATAGGTTGGAGTCTGATCGCAGGTGTTTTGCATTTTTCCACTATAAGATGCCTCAAGAACCT
TTAATATTTGTTGAGGTGGCATTGGTAAACGATGTTGCAAATAGTGTGCAGGCGTTGCTTGATGATAGTGCTCCGAAAAA
GGATCCGTCTGAGGCTAAAGTTGCGATTTTCTACTCTATTTCCAATACGCAGGTTGGGCTTACTGGGATTAGTTTAGGCA
ATTTTCTCATCAAAAGAGTGGTGAGCAGGCTTTCCAGTGAGTTTAGTAACATTAAAACTTATGCTACTCTCTCGCCGATA
CCGGGATTTGTCAGGTGGCTCAATGAGGTTTTGGCATCAGATGGCGATGCGTTCTTGCGCAGTGTAGGTATATCTCATTC
TGTTGAAGGGTTGCAAAGTTATATAAATTCCATTAGTAGCGATCCTAAGAGTATTCCTGTTGTGTCTCAGGAGTTATTGC
TAAGGCTATGTGCGCACTATTTAAATACTAAGAGTGGTAGTAGGGTTATCGATCCTGTTGCTCATTTTCATCTTAGTAAT
GGTGCATCTATTAGGCGACTAAATTGGATGGCTGATACTTCTCAAAAGGGTTTGCTGAGTTCTTTGGGGATTATGGTTAA
TTACAGTTATGAGTTGTCTAAAATTGATGATAATCATGAGGCCTATGTTGTGCATGGGAAGGTCACATATTCTAGAGAAA
TAGCTACTCTTTTGAAGAAAAGTTGA

Upstream 100 bases:

>100_bases
CGCTTATCAAACTTCCTAGACGCTATGTTGTGAACTTTGATGTAGACGAAGCCTTGCAAATGTTATAGCATCAGCGGAAT
TAACCAGCCGCGCTTGCTTT

Downstream 100 bases:

>100_bases
GAAAAGACAAATGTAGGAGGGCGTGGTGTCTTGGATAATCAACGGTGCAAGCCATGATTGGGAGGTTGTAATTGGTCTTG
AGGTACACGCACAGATTGTA

Product: putative malonyl-CoA decarboxylase

Products: NA

Alternate protein names: Malonyl-CoA Decarboxylase Superfamily; Malonyl-CoA Decarboxylase Superfamily Protein; Malonyl-CoA Decarboxylase Protein; MCD Malonyl-CoA Decarboxylase MCD; Malonyl-CoA Decarboxylase Family Protein; Decarboxylase

Number of amino acids: Translated: 461; Mature: 461

Protein sequence:

>461_residues
MENSLLKIKYRTISSVVKVFDEVTDVVLSWVGNIGKDLSRKQDIDNLLSKMRECVSPKGGEVKARYNTISLGNLYLQLSD
VGKARFLRMLNDRFNSTQEEVDSKISEYVNNTDSALEEKLRFELISVLSSPRLSILKQFMSLSEGVKFLVDMRADAITLS
RKGENFFALERDLKGVLSSLFDVGLLELRHITWDSPASLLEKLIFYEAVHAISSWEDLRHRLESDRRCFAFFHYKMPQEP
LIFVEVALVNDVANSVQALLDDSAPKKDPSEAKVAIFYSISNTQVGLTGISLGNFLIKRVVSRLSSEFSNIKTYATLSPI
PGFVRWLNEVLASDGDAFLRSVGISHSVEGLQSYINSISSDPKSIPVVSQELLLRLCAHYLNTKSGSRVIDPVAHFHLSN
GASIRRLNWMADTSQKGLLSSLGIMVNYSYELSKIDDNHEAYVVHGKVTYSREIATLLKKS

Sequences:

>Translated_461_residues
MENSLLKIKYRTISSVVKVFDEVTDVVLSWVGNIGKDLSRKQDIDNLLSKMRECVSPKGGEVKARYNTISLGNLYLQLSD
VGKARFLRMLNDRFNSTQEEVDSKISEYVNNTDSALEEKLRFELISVLSSPRLSILKQFMSLSEGVKFLVDMRADAITLS
RKGENFFALERDLKGVLSSLFDVGLLELRHITWDSPASLLEKLIFYEAVHAISSWEDLRHRLESDRRCFAFFHYKMPQEP
LIFVEVALVNDVANSVQALLDDSAPKKDPSEAKVAIFYSISNTQVGLTGISLGNFLIKRVVSRLSSEFSNIKTYATLSPI
PGFVRWLNEVLASDGDAFLRSVGISHSVEGLQSYINSISSDPKSIPVVSQELLLRLCAHYLNTKSGSRVIDPVAHFHLSN
GASIRRLNWMADTSQKGLLSSLGIMVNYSYELSKIDDNHEAYVVHGKVTYSREIATLLKKS
>Mature_461_residues
MENSLLKIKYRTISSVVKVFDEVTDVVLSWVGNIGKDLSRKQDIDNLLSKMRECVSPKGGEVKARYNTISLGNLYLQLSD
VGKARFLRMLNDRFNSTQEEVDSKISEYVNNTDSALEEKLRFELISVLSSPRLSILKQFMSLSEGVKFLVDMRADAITLS
RKGENFFALERDLKGVLSSLFDVGLLELRHITWDSPASLLEKLIFYEAVHAISSWEDLRHRLESDRRCFAFFHYKMPQEP
LIFVEVALVNDVANSVQALLDDSAPKKDPSEAKVAIFYSISNTQVGLTGISLGNFLIKRVVSRLSSEFSNIKTYATLSPI
PGFVRWLNEVLASDGDAFLRSVGISHSVEGLQSYINSISSDPKSIPVVSQELLLRLCAHYLNTKSGSRVIDPVAHFHLSN
GASIRRLNWMADTSQKGLLSSLGIMVNYSYELSKIDDNHEAYVVHGKVTYSREIATLLKKS

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI110349750, Length=369, Percent_Identity=37.1273712737127, Blast_Score=229, Evalue=4e-60,
Organism=Caenorhabditis elegans, GI71985309, Length=383, Percent_Identity=34.4647519582245, Blast_Score=236, Evalue=1e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51763; Mature: 51763

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENSLLKIKYRTISSVVKVFDEVTDVVLSWVGNIGKDLSRKQDIDNLLSKMRECVSPKGG
CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
EVKARYNTISLGNLYLQLSDVGKARFLRMLNDRFNSTQEEVDSKISEYVNNTDSALEEKL
CEEEEEEEEEECEEEEEEHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHH
RFELISVLSSPRLSILKQFMSLSEGVKFLVDMRADAITLSRKGENFFALERDLKGVLSSL
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHH
FDVGLLELRHITWDSPASLLEKLIFYEAVHAISSWEDLRHRLESDRRCFAFFHYKMPQEP
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCC
LIFVEVALVNDVANSVQALLDDSAPKKDPSEAKVAIFYSISNTQVGLTGISLGNFLIKRV
EEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCEEEEEHHHHHHHHHHHH
VSRLSSEFSNIKTYATLSPIPGFVRWLNEVLASDGDAFLRSVGISHSVEGLQSYINSISS
HHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHCC
DPKSIPVVSQELLLRLCAHYLNTKSGSRVIDPVAHFHLSNGASIRRLNWMADTSQKGLLS
CCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEEEEEHHCCCHHHHHH
SLGIMVNYSYELSKIDDNHEAYVVHGKVTYSREIATLLKKS
HCCHHEECCEEEECCCCCCCEEEEEECEEHHHHHHHHHHCC
>Mature Secondary Structure
MENSLLKIKYRTISSVVKVFDEVTDVVLSWVGNIGKDLSRKQDIDNLLSKMRECVSPKGG
CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
EVKARYNTISLGNLYLQLSDVGKARFLRMLNDRFNSTQEEVDSKISEYVNNTDSALEEKL
CEEEEEEEEEECEEEEEEHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHH
RFELISVLSSPRLSILKQFMSLSEGVKFLVDMRADAITLSRKGENFFALERDLKGVLSSL
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHH
FDVGLLELRHITWDSPASLLEKLIFYEAVHAISSWEDLRHRLESDRRCFAFFHYKMPQEP
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCC
LIFVEVALVNDVANSVQALLDDSAPKKDPSEAKVAIFYSISNTQVGLTGISLGNFLIKRV
EEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCEEEEEHHHHHHHHHHHH
VSRLSSEFSNIKTYATLSPIPGFVRWLNEVLASDGDAFLRSVGISHSVEGLQSYINSISS
HHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHCC
DPKSIPVVSQELLLRLCAHYLNTKSGSRVIDPVAHFHLSNGASIRRLNWMADTSQKGLLS
CCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEEEEEHHCCCHHHHHH
SLGIMVNYSYELSKIDDNHEAYVVHGKVTYSREIATLLKKS
HCCHHEECCEEEECCCCCCCEEEEEECEEHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA