Definition | Anaplasma phagocytophilum HZ, complete genome. |
---|---|
Accession | NC_007797 |
Length | 1,471,282 |
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The map label for this gene is dut [H]
Identifier: 88606839
GI number: 88606839
Start: 386447
End: 386887
Strand: Reverse
Name: dut [H]
Synonym: APH_0379
Alternate gene names: 88606839
Gene position: 386887-386447 (Counterclockwise)
Preceding gene: 88607179
Following gene: 88607365
Centisome position: 26.3
GC content: 48.07
Gene sequence:
>441_bases ATGAAGGTAGGAATTATACGAATGAAGGGAGGAGAAGGGTTACCCTTGCCCTCTTACGCAACTCCGCAAAGTGCGGGGCT GGATTTATATGCTGCACTTAGTGAAGAGGTGGTTATACGTTCTGGTGAGCGGTGTCTTATTCGCACAGGTGTGGCTATTG AGCTTCCTGATGGCTATGAAGCACAAGTTCGATCGCGGTCTGGTTTGGCTGTAAAAGCTGGTGTTGTAGTTTTAAATTCT CCTGGCACTATTGATGCAGATTACCGCGGTGAGATTGCCGTAATCCTAGCGAATTTTGGTGCTAGCGATTACGTTGTCAA GCATGGTGACAGGATTGCCCAGCTCGTCATAGCGCCTGTTATGCGTATTTCTTGGGAAGAATCTTCCAATATTACTGAAA CTCAGCGTGGCGCAGGGGGCTTTGGCTCTACTGGAGTCTAA
Upstream 100 bases:
>100_bases TCCCAGCAAAAATACACCAACTTTTCGTTGCTTTGAATATGACTTGATTCTCTAGAGAAAGAACGTTATCATGCGGCACT CGTGGCTGTTGCTGGCTTAT
Downstream 100 bases:
>100_bases TCTTCCGAAAACAGGTTGTTTTTCCGTGAAGCGCTGTCTATTAGGGACGTGTGTTTGGTGGTGGTGTTGTGAACATTTGC AAGGAAAAAACGCCTTGAGC
Product: deoxyuridine 5'-triphosphate nucleotidohydrolase
Products: NA
Alternate protein names: dUTPase; dUTP pyrophosphatase [H]
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MKVGIIRMKGGEGLPLPSYATPQSAGLDLYAALSEEVVIRSGERCLIRTGVAIELPDGYEAQVRSRSGLAVKAGVVVLNS PGTIDADYRGEIAVILANFGASDYVVKHGDRIAQLVIAPVMRISWEESSNITETQRGAGGFGSTGV
Sequences:
>Translated_146_residues MKVGIIRMKGGEGLPLPSYATPQSAGLDLYAALSEEVVIRSGERCLIRTGVAIELPDGYEAQVRSRSGLAVKAGVVVLNS PGTIDADYRGEIAVILANFGASDYVVKHGDRIAQLVIAPVMRISWEESSNITETQRGAGGFGSTGV >Mature_146_residues MKVGIIRMKGGEGLPLPSYATPQSAGLDLYAALSEEVVIRSGERCLIRTGVAIELPDGYEAQVRSRSGLAVKAGVVVLNS PGTIDADYRGEIAVILANFGASDYVVKHGDRIAQLVIAPVMRISWEESSNITETQRGAGGFGSTGV
Specific function: This enzyme is involved in nucleotide metabolism:it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA [H]
COG id: COG0756
COG function: function code F; dUTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dUTPase family [H]
Homologues:
Organism=Homo sapiens, GI70906444, Length=129, Percent_Identity=42.6356589147287, Blast_Score=100, Evalue=7e-22, Organism=Homo sapiens, GI4503423, Length=129, Percent_Identity=42.6356589147287, Blast_Score=99, Evalue=1e-21, Organism=Homo sapiens, GI70906441, Length=129, Percent_Identity=42.6356589147287, Blast_Score=98, Evalue=2e-21, Organism=Escherichia coli, GI1790071, Length=146, Percent_Identity=39.041095890411, Blast_Score=107, Evalue=3e-25, Organism=Caenorhabditis elegans, GI71988561, Length=134, Percent_Identity=44.7761194029851, Blast_Score=116, Evalue=5e-27, Organism=Saccharomyces cerevisiae, GI6319729, Length=133, Percent_Identity=36.8421052631579, Blast_Score=86, Evalue=3e-18, Organism=Drosophila melanogaster, GI24583610, Length=130, Percent_Identity=37.6923076923077, Blast_Score=89, Evalue=8e-19, Organism=Drosophila melanogaster, GI19921126, Length=130, Percent_Identity=37.6923076923077, Blast_Score=89, Evalue=8e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008180 - InterPro: IPR008181 [H]
Pfam domain/function: PF00692 dUTPase [H]
EC number: =3.6.1.23 [H]
Molecular weight: Translated: 15334; Mature: 15334
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVGIIRMKGGEGLPLPSYATPQSAGLDLYAALSEEVVIRSGERCLIRTGVAIELPDGYE CCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCEEEEEECCEEECCCCCC AQVRSRSGLAVKAGVVVLNSPGTIDADYRGEIAVILANFGASDYVVKHGDRIAQLVIAPV EEEECCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEECCHHHHHHHHHHH MRISWEESSNITETQRGAGGFGSTGV HHEECCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKVGIIRMKGGEGLPLPSYATPQSAGLDLYAALSEEVVIRSGERCLIRTGVAIELPDGYE CCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCEEEEEECCEEECCCCCC AQVRSRSGLAVKAGVVVLNSPGTIDADYRGEIAVILANFGASDYVVKHGDRIAQLVIAPV EEEECCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEECCHHHHHHHHHHH MRISWEESSNITETQRGAGGFGSTGV HHEECCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA