Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87200989
Identifier: 87200989
GI number: 87200989
Start: 3197358
End: 3197930
Strand: Direct
Name: 87200989
Synonym: Saro_2977
Alternate gene names: NA
Gene position: 3197358-3197930 (Clockwise)
Preceding gene: 87200988
Following gene: 87200990
Centisome position: 89.77
GC content: 56.72
Gene sequence:
>573_bases ATGGGCGAGGGCCGAATTTCTCGATGCGCACGGAATGCGTCCGTAAAAGCACACCCCAAAGGACAAGCCATGACCAAAGC TGAAGATATCGTGAAGGGGATGACGGAGGCACAGAAGCGGGCCGTCACCGTGATGGAAGCCTATAGCGACAGCGACACCC CTTGCCGCTCTCCGATGGCGTTGAATACGTCGTCACGGTTTCCCGTGCAGCAATCAAGGAGGCCCGCCATGGATAAGACC GAACGATACGCGCTCGGCATCATGGTCGAAGAGATGGGCGAGACCCTCAAGTTGATCGGCAAGGCAATGCGCTTTGGTCT TGATGCTCCCGGTCCTGATAATGCCGAATACGAGGGCAAAACGGCACGCGAAATGCTCCCAACCGAGATCGGTGATCTGC ATGCTGCTATCAGGTTTGCAGCGATGGCGGCGATTTTTCCCATGTCGCAGGCAAATGATCGGGAAAGCTGGAAACTGGCG AAATTGCTGTCGCCTAACTCCCGTGACGCAAATGGCAATCGCCTTGCTCCTGACCTGACCGCCCACCAACCCAAGGAGTC ACCCCATGACTGA
Upstream 100 bases:
>100_bases ATTATTGCCGCCACTGTTCGGTCACGGGCCGAAACCCATGCCGGGACTATGACTTCACGGAAATCGCACGCTGCCCGAAT GCGTCGGACTATACGCGTGA
Downstream 100 bases:
>100_bases TGTACCTGTGAGCCAGGAGGCTCGGGAAGCCCGTATCGCTCGCTATCTTTCCAACGAGAAGGCAGCACGAGAAAGCCTCG CTACATACCCTGAAAGCACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MGEGRISRCARNASVKAHPKGQAMTKAEDIVKGMTEAQKRAVTVMEAYSDSDTPCRSPMALNTSSRFPVQQSRRPAMDKT ERYALGIMVEEMGETLKLIGKAMRFGLDAPGPDNAEYEGKTAREMLPTEIGDLHAAIRFAAMAAIFPMSQANDRESWKLA KLLSPNSRDANGNRLAPDLTAHQPKESPHD
Sequences:
>Translated_190_residues MGEGRISRCARNASVKAHPKGQAMTKAEDIVKGMTEAQKRAVTVMEAYSDSDTPCRSPMALNTSSRFPVQQSRRPAMDKT ERYALGIMVEEMGETLKLIGKAMRFGLDAPGPDNAEYEGKTAREMLPTEIGDLHAAIRFAAMAAIFPMSQANDRESWKLA KLLSPNSRDANGNRLAPDLTAHQPKESPHD >Mature_189_residues GEGRISRCARNASVKAHPKGQAMTKAEDIVKGMTEAQKRAVTVMEAYSDSDTPCRSPMALNTSSRFPVQQSRRPAMDKTE RYALGIMVEEMGETLKLIGKAMRFGLDAPGPDNAEYEGKTAREMLPTEIGDLHAAIRFAAMAAIFPMSQANDRESWKLAK LLSPNSRDANGNRLAPDLTAHQPKESPHD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20817; Mature: 20686
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 6.3 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEGRISRCARNASVKAHPKGQAMTKAEDIVKGMTEAQKRAVTVMEAYSDSDTPCRSPMA CCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE LNTSSRFPVQQSRRPAMDKTERYALGIMVEEMGETLKLIGKAMRFGLDAPGPDNAEYEGK ECCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC TAREMLPTEIGDLHAAIRFAAMAAIFPMSQANDRESWKLAKLLSPNSRDANGNRLAPDLT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC AHQPKESPHD CCCCCCCCCC >Mature Secondary Structure GEGRISRCARNASVKAHPKGQAMTKAEDIVKGMTEAQKRAVTVMEAYSDSDTPCRSPMA CCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE LNTSSRFPVQQSRRPAMDKTERYALGIMVEEMGETLKLIGKAMRFGLDAPGPDNAEYEGK ECCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC TAREMLPTEIGDLHAAIRFAAMAAIFPMSQANDRESWKLAKLLSPNSRDANGNRLAPDLT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC AHQPKESPHD CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA