Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87200988
Identifier: 87200988
GI number: 87200988
Start: 3195949
End: 3196377
Strand: Direct
Name: 87200988
Synonym: Saro_2976
Alternate gene names: NA
Gene position: 3195949-3196377 (Clockwise)
Preceding gene: 87200983
Following gene: 87200989
Centisome position: 89.73
GC content: 63.4
Gene sequence:
>429_bases ATGCCGCGTTCCGTTCACCCTGAACAACCCGCGAACGAATCGGGAATATCGCCAGCGATTACCGCAAGTTTGCCGCAAGC TGATTTGGGCCATCTCGCCCATTCCAGCATGACCCAAGCACCTGACGCGCCCGAGGGTGGGCACACGCCGGGGCCGTGGC TCCGCATCGACAAGGCCGAGTATGCCGAAATTCAGGCAGCCTTCCGTCCATCGTCACAAGCAGTCGCGCTGGTTGCCAAG CCTGCGGATGCTGACCTGATAGCCGCCGCACCGGAACTGCTTGCAGAGCTGCAATTCGCGGTGAAGCTGCTTGCCCCGCT GATGGGTGAGACTGCGCAGGTTCAATCCATGCGCGCCGCCATCGCCCGCGCCACAGGTGCAGCCCTTCCACCTCCACCCC CACCCAAGGCTCCAGGAGAGAGCGCATGA
Upstream 100 bases:
>100_bases CTAAACCTCTGAAGTCGCTGGAGCGGGTGAAGGGAATCGAACCCTCGTCGTAAGCTTGGGAAGGCTTGGACGGCGCTGGG AAAGCAAGGATTTCCGCCAT
Downstream 100 bases:
>100_bases GCACCCCCGAGACTACGCCGGTTGAACTCAAGCCGTGCCCGAACCCGTGGTGCGTCTCGACTACAGCCCCGCTACCGATC AAATCCACGTATTCCGATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MPRSVHPEQPANESGISPAITASLPQADLGHLAHSSMTQAPDAPEGGHTPGPWLRIDKAEYAEIQAAFRPSSQAVALVAK PADADLIAAAPELLAELQFAVKLLAPLMGETAQVQSMRAAIARATGAALPPPPPPKAPGESA
Sequences:
>Translated_142_residues MPRSVHPEQPANESGISPAITASLPQADLGHLAHSSMTQAPDAPEGGHTPGPWLRIDKAEYAEIQAAFRPSSQAVALVAK PADADLIAAAPELLAELQFAVKLLAPLMGETAQVQSMRAAIARATGAALPPPPPPKAPGESA >Mature_141_residues PRSVHPEQPANESGISPAITASLPQADLGHLAHSSMTQAPDAPEGGHTPGPWLRIDKAEYAEIQAAFRPSSQAVALVAKP ADADLIAAAPELLAELQFAVKLLAPLMGETAQVQSMRAAIARATGAALPPPPPPKAPGESA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14530; Mature: 14398
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRSVHPEQPANESGISPAITASLPQADLGHLAHSSMTQAPDAPEGGHTPGPWLRIDKAE CCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCHH YAEIQAAFRPSSQAVALVAKPADADLIAAAPELLAELQFAVKLLAPLMGETAQVQSMRAA HHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH IARATGAALPPPPPPKAPGESA HHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PRSVHPEQPANESGISPAITASLPQADLGHLAHSSMTQAPDAPEGGHTPGPWLRIDKAE CCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCHH YAEIQAAFRPSSQAVALVAKPADADLIAAAPELLAELQFAVKLLAPLMGETAQVQSMRAA HHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH IARATGAALPPPPPPKAPGESA HHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA