Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87200990
Identifier: 87200990
GI number: 87200990
Start: 3197923
End: 3198303
Strand: Direct
Name: 87200990
Synonym: Saro_2978
Alternate gene names: NA
Gene position: 3197923-3198303 (Clockwise)
Preceding gene: 87200989
Following gene: 87200991
Centisome position: 89.79
GC content: 58.79
Gene sequence:
>381_bases ATGACTGATGTACCTGTGAGCCAGGAGGCTCGGGAAGCCCGTATCGCTCGCTATCTTTCCAACGAGAAGGCAGCACGAGA AAGCCTCGCTACATACCCTGAAAGCACCCGTCAGCGCCTTGAGGCATGGCAGACGGAACAGTGCGAGTGGTTCAGCGACA CGATACTTGAGATCGTTGCGGAGTTCATCACGATCGATGATGCGATCCGCCAGCAAGCAGAGCGCGGGGAGGTCGCAGCC AAACTTACGGAGGACATGACGCTTATTCGAGGCATGCTCGGTCTTTATGCAGGCGTTCAGTCCCGCGTCGGGGACGCCTT TAAGGTCGCAGATGCCGCCCTTGCCTACGCTCTCCCCACCCCACCGGCAGGTGAAGCATGA
Upstream 100 bases:
>100_bases AGCTGGAAACTGGCGAAATTGCTGTCGCCTAACTCCCGTGACGCAAATGGCAATCGCCTTGCTCCTGACCTGACCGCCCA CCAACCCAAGGAGTCACCCC
Downstream 100 bases:
>100_bases CAGCGGAAGAGATAGCGGCGGGGCGAGATGGCCCGCGCATCAACATCAAAGCGACTTGCTCCAGTTGCCGCCACGTAATC AGCGAGAGATACCGCGTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MTDVPVSQEAREARIARYLSNEKAARESLATYPESTRQRLEAWQTEQCEWFSDTILEIVAEFITIDDAIRQQAERGEVAA KLTEDMTLIRGMLGLYAGVQSRVGDAFKVADAALAYALPTPPAGEA
Sequences:
>Translated_126_residues MTDVPVSQEAREARIARYLSNEKAARESLATYPESTRQRLEAWQTEQCEWFSDTILEIVAEFITIDDAIRQQAERGEVAA KLTEDMTLIRGMLGLYAGVQSRVGDAFKVADAALAYALPTPPAGEA >Mature_125_residues TDVPVSQEAREARIARYLSNEKAARESLATYPESTRQRLEAWQTEQCEWFSDTILEIVAEFITIDDAIRQQAERGEVAAK LTEDMTLIRGMLGLYAGVQSRVGDAFKVADAALAYALPTPPAGEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13923; Mature: 13792
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDVPVSQEAREARIARYLSNEKAARESLATYPESTRQRLEAWQTEQCEWFSDTILEIVA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH EFITIDDAIRQQAERGEVAAKLTEDMTLIRGMLGLYAGVQSRVGDAFKVADAALAYALPT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCC PPAGEA CCCCCC >Mature Secondary Structure TDVPVSQEAREARIARYLSNEKAARESLATYPESTRQRLEAWQTEQCEWFSDTILEIVA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH EFITIDDAIRQQAERGEVAAKLTEDMTLIRGMLGLYAGVQSRVGDAFKVADAALAYALPT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCC PPAGEA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA