Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200911

Identifier: 87200911

GI number: 87200911

Start: 3118118

End: 3118897

Strand: Direct

Name: 87200911

Synonym: Saro_2899

Alternate gene names: NA

Gene position: 3118118-3118897 (Clockwise)

Preceding gene: 87200910

Following gene: 87200920

Centisome position: 87.55

GC content: 69.62

Gene sequence:

>780_bases
ATGAAGGCGAGCCTCGGATCGGCGCTGATCGCATTGGCGGGCGCACTTGCGTCGGCAGGGTGCGACACTGCGCCCGATCC
GCAAGCGTCCTCGTCCGCCGAAACCGCGAGCCCCCCCGCGCCCGAGGTATCCGCCACCGCCAGCGAGGCTTTCGTCGCCG
AGGCGGAAGCATCGGCCGATGCCGCCGCAGAGGCCAGCCCTGCCGCGCCGAGCGTCGTCACCTATGCACCGAAGGACGAA
TGCGCCGGAAGGGCTGGCTGGACCGATTTCCGCAAGGCGCTGGGGAACGCGGTCTCCGCACGCGATGCCCGTGCCTTCGC
CGCTCTCGCCTCCAGCGATGTCGCGCTCGACTATGGCGGCGGGAGCGGGACGGATGAACTGGTCAAGCGGCTTTCCGACC
CCGCGTCCGGGCTGTGGCAGGAACTCGACGCGATCCTGCCGCTGGGCTGCGCGGTTCAGGGCGGGCTGGCCGCCATGCCG
TGGATCTTCTGGAACGTACCGGAAAACACCGAAAGCTATGAAACGATGCTGGTGCTGGGCCAGGACACGGCATTGCGCGA
CCGGCCGGGCGGCAAGGCCCTGGCTCCGGCGGGCTGGCGCCTCGCGTCGATCGATACGAGACGCTTCGATCCCAAGGCGC
GCGCTGCGCGGGTGACGCTGGAAGATGGCGCGAAGGGCTGGATAGAGACTGCGAAGCTGCGCAGCCTTCTCGACTATCGG
CTGATCGCGGAGCCGCGCGACGGCGGCTGGCGCATCACCGCCTTCATCGCCGGGGACTAG

Upstream 100 bases:

>100_bases
TTGAAGAAGTGCCGCTTGTCGAATCCGCGCCCCGTTATGCCGATGCGGAACCGGCGGCGATTGCCGCGGTTCCGGACGAT
GAAGGGACGATAGCAGCGGA

Downstream 100 bases:

>100_bases
GCGGCTTATTCCGCCTTGAGTTGGAGATCGAGCGCGTGGCCGCCCGACGTCAGCCGCATCGAACGGCCCCTGCGCGAAAT
CTCGGGAGCCGCCGAAAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MKASLGSALIALAGALASAGCDTAPDPQASSSAETASPPAPEVSATASEAFVAEAEASADAAAEASPAAPSVVTYAPKDE
CAGRAGWTDFRKALGNAVSARDARAFAALASSDVALDYGGGSGTDELVKRLSDPASGLWQELDAILPLGCAVQGGLAAMP
WIFWNVPENTESYETMLVLGQDTALRDRPGGKALAPAGWRLASIDTRRFDPKARAARVTLEDGAKGWIETAKLRSLLDYR
LIAEPRDGGWRITAFIAGD

Sequences:

>Translated_259_residues
MKASLGSALIALAGALASAGCDTAPDPQASSSAETASPPAPEVSATASEAFVAEAEASADAAAEASPAAPSVVTYAPKDE
CAGRAGWTDFRKALGNAVSARDARAFAALASSDVALDYGGGSGTDELVKRLSDPASGLWQELDAILPLGCAVQGGLAAMP
WIFWNVPENTESYETMLVLGQDTALRDRPGGKALAPAGWRLASIDTRRFDPKARAARVTLEDGAKGWIETAKLRSLLDYR
LIAEPRDGGWRITAFIAGD
>Mature_259_residues
MKASLGSALIALAGALASAGCDTAPDPQASSSAETASPPAPEVSATASEAFVAEAEASADAAAEASPAAPSVVTYAPKDE
CAGRAGWTDFRKALGNAVSARDARAFAALASSDVALDYGGGSGTDELVKRLSDPASGLWQELDAILPLGCAVQGGLAAMP
WIFWNVPENTESYETMLVLGQDTALRDRPGGKALAPAGWRLASIDTRRFDPKARAARVTLEDGAKGWIETAKLRSLLDYR
LIAEPRDGGWRITAFIAGD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26693; Mature: 26693

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKASLGSALIALAGALASAGCDTAPDPQASSSAETASPPAPEVSATASEAFVAEAEASAD
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC
AAAEASPAAPSVVTYAPKDECAGRAGWTDFRKALGNAVSARDARAFAALASSDVALDYGG
HHCCCCCCCCCEEEECCCHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEECCC
GSGTDELVKRLSDPASGLWQELDAILPLGCAVQGGLAAMPWIFWNVPENTESYETMLVLG
CCCHHHHHHHHCCHHHHHHHHHHHHHCCCHHHCCCCHHCCEEEEECCCCCCCEEEEEEEC
QDTALRDRPGGKALAPAGWRLASIDTRRFDPKARAARVTLEDGAKGWIETAKLRSLLDYR
CCCCCCCCCCCCEECCCCCEEEECCCCCCCCCHHEEEEECCCCCCHHHHHHHHHHHHHHH
LIAEPRDGGWRITAFIAGD
HEECCCCCCEEEEEEEECC
>Mature Secondary Structure
MKASLGSALIALAGALASAGCDTAPDPQASSSAETASPPAPEVSATASEAFVAEAEASAD
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC
AAAEASPAAPSVVTYAPKDECAGRAGWTDFRKALGNAVSARDARAFAALASSDVALDYGG
HHCCCCCCCCCEEEECCCHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEECCC
GSGTDELVKRLSDPASGLWQELDAILPLGCAVQGGLAAMPWIFWNVPENTESYETMLVLG
CCCHHHHHHHHCCHHHHHHHHHHHHHCCCHHHCCCCHHCCEEEEECCCCCCCEEEEEEEC
QDTALRDRPGGKALAPAGWRLASIDTRRFDPKARAARVTLEDGAKGWIETAKLRSLLDYR
CCCCCCCCCCCCEECCCCCEEEECCCCCCCCCHHEEEEECCCCCCHHHHHHHHHHHHHHH
LIAEPRDGGWRITAFIAGD
HEECCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA