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The map label for this gene is rmuC [H]

Identifier: 87200910

GI number: 87200910

Start: 3116607

End: 3118121

Strand: Direct

Name: rmuC [H]

Synonym: Saro_2898

Alternate gene names: 87200910

Gene position: 3116607-3118121 (Clockwise)

Preceding gene: 87200909

Following gene: 87200911

Centisome position: 87.51

GC content: 65.15

Gene sequence:

>1515_bases
GTGGATTCTGCCCTGCTCGTCGTTGTTGCACTCGTGATCGGCCTCGGGATCGGCTGGTTCCTCGGCTCGCGTCCAACAGC
CGAATGGCGCGCGCGGCATGACCAGCGCGATGCCGATGCCAAGGCGCACGAAGGCACGATCAAGGCGATGACCGTCGATC
TTGCCGCCACGGTCGAACAGAAGAAGGCGCTGGAAGCCAGCCTCGCCGAATTGCAGGACGTGCGCCGCCAGCGCGACGAA
CTTGCCCCGGCCCTCGCTGCTGCCCGACAGCGCGCTTCGGATGCCGATCAGGTGCGCGCCGAACTGGCGCAGGTGCGCGA
TGATCGTGAAGCCCTGCGCGCGGATCTCGAACGCCTGAAGGCTGACGCCGAGAACTTCGCCGAGCAGAAGCGCCTGCTGA
TCGAAGCGCAGGAAGCGCTGCGCAAGGAGTTCGAGAACGCCGGCAACAAGGTGCTGGAGAAGGCGCAGGAGACCTTCCTG
GCCCGCGCGCAGTCGCGCTTCGAGGAAAGCGAGAAGACCAGCGCCGAACGGCTCAAGTCGCTGCTCGCGCCGGTCGACCA
GCGGCTGAAGAGCTACGAGGAGCAGGTCCAGAACCTCGAGAAACAGCGGGTCGATTCGTTCGGCCAGCTTACCGGCCTGA
TCCAGTCGATGCGCGACGGGCAGGAAGCGGTGCGGGCCGCCGCTGCCCAGCTCGGCAACAGCTTGCGCAATGGTCCCAAG
ACCCGCGGACGCTGGGGCGAACTTCAGTTGCGCAACGTGCTGGAACAGTGCGGCCTTTCCGAACACACCGATTTCATCAC
CGAACATTCGGTCGAGACCGATGAAGGGCGCCTGCGCCCCGACGCCATCGTGCGCGTGCCCGGCAACAAGTTGCTGGTGA
TCGATGCCAAGGTATCGCTCAACGCTTACCAGGACGCCTTCGAGGCGGAGGACGACGATACCCGCAAGATCGCGCTCAAT
GCCCACGTCCAGTCGATGCGCAACCATATCCAGACGCTGGGCGCAAAGTCCTACCAGTCGCAGTTCGAGGAAGCGCCGGA
CTATGTGCTGATGTTCGTGCCCGGCGAGCACTTCATCGCCGCCGCGCTGGAGCGCGATCCCACGTTGTGGGACTTCGCGT
TCGAGCGCCGCGTCCTGCTGGCAAGCCCGACCAACCTCGTCGCCATCGCCCGCACCGTCGCGCAGGTATGGCGACAGGAC
GGCCTTGCCCGCGAGGCGCGCGAGATCGGCCGCATGGGCGGCGAGCTTTACGACCGGCTGGCGGTTGCCGCCGAACACCT
CAAGCGTGTCGGCAGCGGGCTCGACAGTGCGGTCAGCAATTACAACAAGTTCGTCGGCAGCTTCGAACGCAATGTGCTGT
CGGCAGGTCGCCGCCTGAAGGACAAGCACATCGAGATCGGCAAGCGCGAACTTGAAGAAGTGCCGCTTGTCGAATCCGCG
CCCCGTTATGCCGATGCGGAACCGGCGGCGATTGCCGCGGTTCCGGACGATGAAGGGACGATAGCAGCGGAATGA

Upstream 100 bases:

>100_bases
GTTCCGCGCTCCGCCGTGCCTGTGGAACAGACGGTCCGAAGCGGTTGCGCTGGAGGCCCCGTCGGGATAGGTTCCCATTT
CGTTCCAATCGGAGAAGTTC

Downstream 100 bases:

>100_bases
AGGCGAGCCTCGGATCGGCGCTGATCGCATTGGCGGGCGCACTTGCGTCGGCAGGGTGCGACACTGCGCCCGATCCGCAA
GCGTCCTCGTCCGCCGAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 504; Mature: 504

Protein sequence:

>504_residues
MDSALLVVVALVIGLGIGWFLGSRPTAEWRARHDQRDADAKAHEGTIKAMTVDLAATVEQKKALEASLAELQDVRRQRDE
LAPALAAARQRASDADQVRAELAQVRDDREALRADLERLKADAENFAEQKRLLIEAQEALRKEFENAGNKVLEKAQETFL
ARAQSRFEESEKTSAERLKSLLAPVDQRLKSYEEQVQNLEKQRVDSFGQLTGLIQSMRDGQEAVRAAAAQLGNSLRNGPK
TRGRWGELQLRNVLEQCGLSEHTDFITEHSVETDEGRLRPDAIVRVPGNKLLVIDAKVSLNAYQDAFEAEDDDTRKIALN
AHVQSMRNHIQTLGAKSYQSQFEEAPDYVLMFVPGEHFIAAALERDPTLWDFAFERRVLLASPTNLVAIARTVAQVWRQD
GLAREAREIGRMGGELYDRLAVAAEHLKRVGSGLDSAVSNYNKFVGSFERNVLSAGRRLKDKHIEIGKRELEEVPLVESA
PRYADAEPAAIAAVPDDEGTIAAE

Sequences:

>Translated_504_residues
MDSALLVVVALVIGLGIGWFLGSRPTAEWRARHDQRDADAKAHEGTIKAMTVDLAATVEQKKALEASLAELQDVRRQRDE
LAPALAAARQRASDADQVRAELAQVRDDREALRADLERLKADAENFAEQKRLLIEAQEALRKEFENAGNKVLEKAQETFL
ARAQSRFEESEKTSAERLKSLLAPVDQRLKSYEEQVQNLEKQRVDSFGQLTGLIQSMRDGQEAVRAAAAQLGNSLRNGPK
TRGRWGELQLRNVLEQCGLSEHTDFITEHSVETDEGRLRPDAIVRVPGNKLLVIDAKVSLNAYQDAFEAEDDDTRKIALN
AHVQSMRNHIQTLGAKSYQSQFEEAPDYVLMFVPGEHFIAAALERDPTLWDFAFERRVLLASPTNLVAIARTVAQVWRQD
GLAREAREIGRMGGELYDRLAVAAEHLKRVGSGLDSAVSNYNKFVGSFERNVLSAGRRLKDKHIEIGKRELEEVPLVESA
PRYADAEPAAIAAVPDDEGTIAAE
>Mature_504_residues
MDSALLVVVALVIGLGIGWFLGSRPTAEWRARHDQRDADAKAHEGTIKAMTVDLAATVEQKKALEASLAELQDVRRQRDE
LAPALAAARQRASDADQVRAELAQVRDDREALRADLERLKADAENFAEQKRLLIEAQEALRKEFENAGNKVLEKAQETFL
ARAQSRFEESEKTSAERLKSLLAPVDQRLKSYEEQVQNLEKQRVDSFGQLTGLIQSMRDGQEAVRAAAAQLGNSLRNGPK
TRGRWGELQLRNVLEQCGLSEHTDFITEHSVETDEGRLRPDAIVRVPGNKLLVIDAKVSLNAYQDAFEAEDDDTRKIALN
AHVQSMRNHIQTLGAKSYQSQFEEAPDYVLMFVPGEHFIAAALERDPTLWDFAFERRVLLASPTNLVAIARTVAQVWRQD
GLAREAREIGRMGGELYDRLAVAAEHLKRVGSGLDSAVSNYNKFVGSFERNVLSAGRRLKDKHIEIGKRELEEVPLVESA
PRYADAEPAAIAAVPDDEGTIAAE

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

Organism=Escherichia coli, GI1790266, Length=500, Percent_Identity=32.6, Blast_Score=215, Evalue=4e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 56056; Mature: 56056

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSALLVVVALVIGLGIGWFLGSRPTAEWRARHDQRDADAKAHEGTIKAMTVDLAATVEQ
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHCCCHHHEEHHHHHHHHH
KKALEASLAELQDVRRQRDELAPALAAARQRASDADQVRAELAQVRDDREALRADLERLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ADAENFAEQKRLLIEAQEALRKEFENAGNKVLEKAQETFLARAQSRFEESEKTSAERLKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAPVDQRLKSYEEQVQNLEKQRVDSFGQLTGLIQSMRDGQEAVRAAAAQLGNSLRNGPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TRGRWGELQLRNVLEQCGLSEHTDFITEHSVETDEGRLRPDAIVRVPGNKLLVIDAKVSL
CCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCEEEECCCEEEEEECCHHH
NAYQDAFEAEDDDTRKIALNAHVQSMRNHIQTLGAKSYQSQFEEAPDYVLMFVPGEHFIA
HHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEECCHHHHH
AALERDPTLWDFAFERRVLLASPTNLVAIARTVAQVWRQDGLAREAREIGRMGGELYDRL
HHHHCCCCHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
AVAAEHLKRVGSGLDSAVSNYNKFVGSFERNVLSAGRRLKDKHIEIGKRELEEVPLVESA
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PRYADAEPAAIAAVPDDEGTIAAE
CCCCCCCCCEEEECCCCCCCCCCC
>Mature Secondary Structure
MDSALLVVVALVIGLGIGWFLGSRPTAEWRARHDQRDADAKAHEGTIKAMTVDLAATVEQ
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHCCCHHHEEHHHHHHHHH
KKALEASLAELQDVRRQRDELAPALAAARQRASDADQVRAELAQVRDDREALRADLERLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ADAENFAEQKRLLIEAQEALRKEFENAGNKVLEKAQETFLARAQSRFEESEKTSAERLKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAPVDQRLKSYEEQVQNLEKQRVDSFGQLTGLIQSMRDGQEAVRAAAAQLGNSLRNGPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TRGRWGELQLRNVLEQCGLSEHTDFITEHSVETDEGRLRPDAIVRVPGNKLLVIDAKVSL
CCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCEEEECCCEEEEEECCHHH
NAYQDAFEAEDDDTRKIALNAHVQSMRNHIQTLGAKSYQSQFEEAPDYVLMFVPGEHFIA
HHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEECCHHHHH
AALERDPTLWDFAFERRVLLASPTNLVAIARTVAQVWRQDGLAREAREIGRMGGELYDRL
HHHHCCCCHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
AVAAEHLKRVGSGLDSAVSNYNKFVGSFERNVLSAGRRLKDKHIEIGKRELEEVPLVESA
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PRYADAEPAAIAAVPDDEGTIAAE
CCCCCCCCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA