Click here to switch to the map view.

The map label for this gene is recR

Identifier: 87200908

GI number: 87200908

Start: 3114802

End: 3115398

Strand: Direct

Name: recR

Synonym: Saro_2895

Alternate gene names: 87200908

Gene position: 3114802-3115398 (Clockwise)

Preceding gene: 87200904

Following gene: 87200909

Centisome position: 87.46

GC content: 68.17

Gene sequence:

>597_bases
ATGGCATCGCAAGAGATCGAGGCACTTTCCGGCGCTCTGGCGCGACTCCCGGGGCTCGGCCCGCGCTCGGCGAGACGCGC
CGTGCTGTGGCTGATCAAGCGCCGCGAAACCGCGCTGCCGCAACTGCTGAATGCCTTGACCCAAGTCCAGGAACTGCTGG
TGGAGTGCGGGGTCTGCGGCAACGTCGACACTTCGAACCCCTGCGGCATCTGTACCGACCACCGCCGCGACCAGCGTTCG
ATCTGCGTGGTCGAGGAAGTCGCGGACCTGTGGGCGCTCGATCGCGCGCGGCTGTTCACCGGCAAGTACCATGTTCTTGG
CGGCAGGCTCTCCGCGCTGGAAGGCGTGCGGCCTGAGGACCTGACCATCGGCAGCCTGCTGGACAGGGTAGCTCAGGGCG
GGATCGACGAGGTCGTCCTGGCCATGAACGCCACGCTGGAAGGCCAGACCACCGCGCACTACATCGCCGAGCGGCTGGAA
GGCGCGGCGGTGCGGGTGACGCAGCTTGCCCATGGCCTGCCGGTGGGGGGCGAACTCGATTATCTCGATGAAGGCACACT
GGCGCAGGCCCTGCGGGCAAGGCGCCCGGTGGGCTGA

Upstream 100 bases:

>100_bases
CCAGCGTCGGCACCGCGAAATCGGGCGTCCCCATGAAGATGATGCGCATAAGCTGTCAGAAGGCCTTCCGTTTGTCGGCT
CCGGCCCTATCTGTGCTGCC

Downstream 100 bases:

>100_bases
GAGCCGATCACACTGATCGAAACGGTGTCCTTGCGACTCCGCCGGACATTCCTTATCTGCGCCCCATGGCCATCCGCGAA
ATCATCGAAGTCCCCGACCC

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MASQEIEALSGALARLPGLGPRSARRAVLWLIKRRETALPQLLNALTQVQELLVECGVCGNVDTSNPCGICTDHRRDQRS
ICVVEEVADLWALDRARLFTGKYHVLGGRLSALEGVRPEDLTIGSLLDRVAQGGIDEVVLAMNATLEGQTTAHYIAERLE
GAAVRVTQLAHGLPVGGELDYLDEGTLAQALRARRPVG

Sequences:

>Translated_198_residues
MASQEIEALSGALARLPGLGPRSARRAVLWLIKRRETALPQLLNALTQVQELLVECGVCGNVDTSNPCGICTDHRRDQRS
ICVVEEVADLWALDRARLFTGKYHVLGGRLSALEGVRPEDLTIGSLLDRVAQGGIDEVVLAMNATLEGQTTAHYIAERLE
GAAVRVTQLAHGLPVGGELDYLDEGTLAQALRARRPVG
>Mature_197_residues
ASQEIEALSGALARLPGLGPRSARRAVLWLIKRRETALPQLLNALTQVQELLVECGVCGNVDTSNPCGICTDHRRDQRSI
CVVEEVADLWALDRARLFTGKYHVLGGRLSALEGVRPEDLTIGSLLDRVAQGGIDEVVLAMNATLEGQTTAHYIAERLEG
AAVRVTQLAHGLPVGGELDYLDEGTLAQALRARRPVG

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

Organism=Escherichia coli, GI1786678, Length=187, Percent_Identity=40.6417112299465, Blast_Score=144, Evalue=4e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_NOVAD (Q2G492)

Other databases:

- EMBL:   CP000248
- RefSeq:   YP_498165.1
- ProteinModelPortal:   Q2G492
- SMR:   Q2G492
- STRING:   Q2G492
- GeneID:   3915534
- GenomeReviews:   CP000248_GR
- KEGG:   nar:Saro_2895
- eggNOG:   COG0353
- HOGENOM:   HBG571744
- OMA:   HGAISPM
- PhylomeDB:   Q2G492
- ProtClustDB:   PRK00076
- BioCyc:   NARO279238:SARO_2895-MONOMER
- HAMAP:   MF_00017
- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967
- SMART:   SM00278
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF02132 RecR; PF01751 Toprim; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 21325; Mature: 21194

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASQEIEALSGALARLPGLGPRSARRAVLWLIKRRETALPQLLNALTQVQELLVECGVCG
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NVDTSNPCGICTDHRRDQRSICVVEEVADLWALDRARLFTGKYHVLGGRLSALEGVRPED
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHCCCCCCC
LTIGSLLDRVAQGGIDEVVLAMNATLEGQTTAHYIAERLEGAAVRVTQLAHGLPVGGELD
CHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCC
YLDEGTLAQALRARRPVG
CCCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
ASQEIEALSGALARLPGLGPRSARRAVLWLIKRRETALPQLLNALTQVQELLVECGVCG
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NVDTSNPCGICTDHRRDQRSICVVEEVADLWALDRARLFTGKYHVLGGRLSALEGVRPED
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHCCCCCCC
LTIGSLLDRVAQGGIDEVVLAMNATLEGQTTAHYIAERLEGAAVRVTQLAHGLPVGGELD
CHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCC
YLDEGTLAQALRARRPVG
CCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA