Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
---|---|
Accession | NC_007794 |
Length | 3,561,584 |
Click here to switch to the map view.
The map label for this gene is 87200869
Identifier: 87200869
GI number: 87200869
Start: 3080262
End: 3080753
Strand: Direct
Name: 87200869
Synonym: Saro_2856
Alternate gene names: NA
Gene position: 3080262-3080753 (Clockwise)
Preceding gene: 87200868
Following gene: 87200870
Centisome position: 86.49
GC content: 66.06
Gene sequence:
>492_bases ATGAAAGCGTTCTTCCGCAATGTCTCCCCTCGCCGCGCGGTCGTCGACCTGTGGGAAGTGCTCGGCGCGCCGAGCGAGTA CCGCAAGCTGGGGCTGATCCTGGCGGCGATGGTCACCGGCGGCATCTTCTTCGTGATGAGCCAACAAGGCGGGCGCGGCC TGCCCCGGCCACCCGAGATCACCTATTTCCCGAGCTTCCTCGAAGGGCGCACCGACGCCGAGATCCTTGCCGAGAACAAG GCGGCGACCGCCAAGGCCAAGGCCGAGATCGCCGAGGAGGAAGCCCGGCAGGAGCGCATCCGCCAACTCTATCGCGCGGT CGGGGATGCCACCGGGGTCGAGACGAAGAAGCCGTATGAAGAGGGCAAGGCCGAGCGCGAGGCCTACCAGCGCAAGCTCG ACGCGGCGCGCAAGGCGATCCTCGACAAGCACATGATCGATAATCCGGTGTTCGACGAGGCGACCGGCAAGGAACAGCCC GGAACGCAATGA
Upstream 100 bases:
>100_bases GACACGGCGAACCGCTGGCTCAAGCGGCACGGGCGCACGCTTTACGTGCTGTTCGGGTGATGGGTGGCACTTTGATGGCC AAGGCCCTATCTAGGCGCGC
Downstream 100 bases:
>100_bases GCGCCGCCGACGACCTGCGCTGGCTTGACGCGGCAGCTAGCCTCGGCGCGCGCGGGCGACCTCTCAGCAGGCCCAATCCG GCGGTCGGCGCGGTAATCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MKAFFRNVSPRRAVVDLWEVLGAPSEYRKLGLILAAMVTGGIFFVMSQQGGRGLPRPPEITYFPSFLEGRTDAEILAENK AATAKAKAEIAEEEARQERIRQLYRAVGDATGVETKKPYEEGKAEREAYQRKLDAARKAILDKHMIDNPVFDEATGKEQP GTQ
Sequences:
>Translated_163_residues MKAFFRNVSPRRAVVDLWEVLGAPSEYRKLGLILAAMVTGGIFFVMSQQGGRGLPRPPEITYFPSFLEGRTDAEILAENK AATAKAKAEIAEEEARQERIRQLYRAVGDATGVETKKPYEEGKAEREAYQRKLDAARKAILDKHMIDNPVFDEATGKEQP GTQ >Mature_163_residues MKAFFRNVSPRRAVVDLWEVLGAPSEYRKLGLILAAMVTGGIFFVMSQQGGRGLPRPPEITYFPSFLEGRTDAEILAENK AATAKAKAEIAEEEARQERIRQLYRAVGDATGVETKKPYEEGKAEREAYQRKLDAARKAILDKHMIDNPVFDEATGKEQP GTQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18185; Mature: 18185
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAFFRNVSPRRAVVDLWEVLGAPSEYRKLGLILAAMVTGGIFFVMSQQGGRGLPRPPEI CCCHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCC TYFPSFLEGRTDAEILAENKAATAKAKAEIAEEEARQERIRQLYRAVGDATGVETKKPYE CCCCHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH EGKAEREAYQRKLDAARKAILDKHMIDNPVFDEATGKEQPGTQ HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKAFFRNVSPRRAVVDLWEVLGAPSEYRKLGLILAAMVTGGIFFVMSQQGGRGLPRPPEI CCCHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCC TYFPSFLEGRTDAEILAENKAATAKAKAEIAEEEARQERIRQLYRAVGDATGVETKKPYE CCCCHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH EGKAEREAYQRKLDAARKAILDKHMIDNPVFDEATGKEQPGTQ HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA