Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

Click here to switch to the map view.

The map label for this gene is 87200869

Identifier: 87200869

GI number: 87200869

Start: 3080262

End: 3080753

Strand: Direct

Name: 87200869

Synonym: Saro_2856

Alternate gene names: NA

Gene position: 3080262-3080753 (Clockwise)

Preceding gene: 87200868

Following gene: 87200870

Centisome position: 86.49

GC content: 66.06

Gene sequence:

>492_bases
ATGAAAGCGTTCTTCCGCAATGTCTCCCCTCGCCGCGCGGTCGTCGACCTGTGGGAAGTGCTCGGCGCGCCGAGCGAGTA
CCGCAAGCTGGGGCTGATCCTGGCGGCGATGGTCACCGGCGGCATCTTCTTCGTGATGAGCCAACAAGGCGGGCGCGGCC
TGCCCCGGCCACCCGAGATCACCTATTTCCCGAGCTTCCTCGAAGGGCGCACCGACGCCGAGATCCTTGCCGAGAACAAG
GCGGCGACCGCCAAGGCCAAGGCCGAGATCGCCGAGGAGGAAGCCCGGCAGGAGCGCATCCGCCAACTCTATCGCGCGGT
CGGGGATGCCACCGGGGTCGAGACGAAGAAGCCGTATGAAGAGGGCAAGGCCGAGCGCGAGGCCTACCAGCGCAAGCTCG
ACGCGGCGCGCAAGGCGATCCTCGACAAGCACATGATCGATAATCCGGTGTTCGACGAGGCGACCGGCAAGGAACAGCCC
GGAACGCAATGA

Upstream 100 bases:

>100_bases
GACACGGCGAACCGCTGGCTCAAGCGGCACGGGCGCACGCTTTACGTGCTGTTCGGGTGATGGGTGGCACTTTGATGGCC
AAGGCCCTATCTAGGCGCGC

Downstream 100 bases:

>100_bases
GCGCCGCCGACGACCTGCGCTGGCTTGACGCGGCAGCTAGCCTCGGCGCGCGCGGGCGACCTCTCAGCAGGCCCAATCCG
GCGGTCGGCGCGGTAATCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MKAFFRNVSPRRAVVDLWEVLGAPSEYRKLGLILAAMVTGGIFFVMSQQGGRGLPRPPEITYFPSFLEGRTDAEILAENK
AATAKAKAEIAEEEARQERIRQLYRAVGDATGVETKKPYEEGKAEREAYQRKLDAARKAILDKHMIDNPVFDEATGKEQP
GTQ

Sequences:

>Translated_163_residues
MKAFFRNVSPRRAVVDLWEVLGAPSEYRKLGLILAAMVTGGIFFVMSQQGGRGLPRPPEITYFPSFLEGRTDAEILAENK
AATAKAKAEIAEEEARQERIRQLYRAVGDATGVETKKPYEEGKAEREAYQRKLDAARKAILDKHMIDNPVFDEATGKEQP
GTQ
>Mature_163_residues
MKAFFRNVSPRRAVVDLWEVLGAPSEYRKLGLILAAMVTGGIFFVMSQQGGRGLPRPPEITYFPSFLEGRTDAEILAENK
AATAKAKAEIAEEEARQERIRQLYRAVGDATGVETKKPYEEGKAEREAYQRKLDAARKAILDKHMIDNPVFDEATGKEQP
GTQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18185; Mature: 18185

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAFFRNVSPRRAVVDLWEVLGAPSEYRKLGLILAAMVTGGIFFVMSQQGGRGLPRPPEI
CCCHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCC
TYFPSFLEGRTDAEILAENKAATAKAKAEIAEEEARQERIRQLYRAVGDATGVETKKPYE
CCCCHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
EGKAEREAYQRKLDAARKAILDKHMIDNPVFDEATGKEQPGTQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKAFFRNVSPRRAVVDLWEVLGAPSEYRKLGLILAAMVTGGIFFVMSQQGGRGLPRPPEI
CCCHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCC
TYFPSFLEGRTDAEILAENKAATAKAKAEIAEEEARQERIRQLYRAVGDATGVETKKPYE
CCCCHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
EGKAEREAYQRKLDAARKAILDKHMIDNPVFDEATGKEQPGTQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA