Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200868

Identifier: 87200868

GI number: 87200868

Start: 3079463

End: 3080221

Strand: Direct

Name: 87200868

Synonym: Saro_2855

Alternate gene names: NA

Gene position: 3079463-3080221 (Clockwise)

Preceding gene: 87200867

Following gene: 87200869

Centisome position: 86.46

GC content: 72.07

Gene sequence:

>759_bases
ATGCTTGACTGGCTGCGCCGTGCGGACACCAGGGCGAAGGAGCCCGCACGGCCGCGAAAGGTCGCCGCGCGGACCATCGT
GGTGGACGGGCGCGACCTGCCGCTGGTGATCCGCAAGCTGGGCCACGCCCGGCGCATGACCCTGCGCCTTGCCCCGGACG
GCAGCGAGGCGCGCGTCTCGATCCCGGCATGGGGCCGGGTCGGCGACGCGGAAGCCTTTGCGCGGGACCGGGCCGACTGG
CTTGCGGGGCAGCTTGCCCGGTTGCCCGAATCGCGCCAGATCGCGCCCGACGCCACCCTGCCCTATCGCGGCGCGACGCT
TCAGATCGACTGGCAGGCCGCCGCGCGGCGCAAGCCGGTCGTCGAGGGCGACCGCGTGGTCGTGGGCGGTCCGCTCGACG
GATTGGGCGGGCGCATGCAGCGCTGGCTGGAAGCCGAGGCGCTGGCGCTGTCGACAGCGGACCTTGGCCACTACTGCGCG
CGGGCCGGGCAGGAAGTGCCTCGCCTTACGCTGTCGCGGGCGCAGCGGCGCTGGGGGAGCTGCGCAGCGGACGGATCGAT
CCGCATCAACTGGCGGCTGGTGATGGCGCCCGACTTCGTGCGCCGCTCGGTCGTGGCGCACGAAGTGGCGCACATGAAGC
ACTTCGACCACAGCCCTGCGTTCCACACGCACCTCGACGAACTCTACGAAGGCGAGATCGACACGGCGAACCGCTGGCTC
AAGCGGCACGGGCGCACGCTTTACGTGCTGTTCGGGTGA

Upstream 100 bases:

>100_bases
GTGGGCAAGGCAGTGAGCGAAACGATCGCGGGGCCGCTGGACGAGCACATCGTTCCGGCCGACCACTTCGACGGGCGACC
CCGCCGGGGCGGAGGCGGCA

Downstream 100 bases:

>100_bases
TGGGTGGCACTTTGATGGCCAAGGCCCTATCTAGGCGCGCATGAAAGCGTTCTTCCGCAATGTCTCCCCTCGCCGCGCGG
TCGTCGACCTGTGGGAAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: Metal-Dependent Hydrolase; Zinc Metallopeptidase; Zinc Metallopeptidases-Like Protein; Zinc Metallopeptidase-Like Protein; Hydrolase; Zinc Metallopeptidase Protein

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MLDWLRRADTRAKEPARPRKVAARTIVVDGRDLPLVIRKLGHARRMTLRLAPDGSEARVSIPAWGRVGDAEAFARDRADW
LAGQLARLPESRQIAPDATLPYRGATLQIDWQAAARRKPVVEGDRVVVGGPLDGLGGRMQRWLEAEALALSTADLGHYCA
RAGQEVPRLTLSRAQRRWGSCAADGSIRINWRLVMAPDFVRRSVVAHEVAHMKHFDHSPAFHTHLDELYEGEIDTANRWL
KRHGRTLYVLFG

Sequences:

>Translated_252_residues
MLDWLRRADTRAKEPARPRKVAARTIVVDGRDLPLVIRKLGHARRMTLRLAPDGSEARVSIPAWGRVGDAEAFARDRADW
LAGQLARLPESRQIAPDATLPYRGATLQIDWQAAARRKPVVEGDRVVVGGPLDGLGGRMQRWLEAEALALSTADLGHYCA
RAGQEVPRLTLSRAQRRWGSCAADGSIRINWRLVMAPDFVRRSVVAHEVAHMKHFDHSPAFHTHLDELYEGEIDTANRWL
KRHGRTLYVLFG
>Mature_252_residues
MLDWLRRADTRAKEPARPRKVAARTIVVDGRDLPLVIRKLGHARRMTLRLAPDGSEARVSIPAWGRVGDAEAFARDRADW
LAGQLARLPESRQIAPDATLPYRGATLQIDWQAAARRKPVVEGDRVVVGGPLDGLGGRMQRWLEAEALALSTADLGHYCA
RAGQEVPRLTLSRAQRRWGSCAADGSIRINWRLVMAPDFVRRSVVAHEVAHMKHFDHSPAFHTHLDELYEGEIDTANRWL
KRHGRTLYVLFG

Specific function: Unknown

COG id: COG1451

COG function: function code R; Predicted metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28293; Mature: 28293

Theoretical pI: Translated: 10.96; Mature: 10.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDWLRRADTRAKEPARPRKVAARTIVVDGRDLPLVIRKLGHARRMTLRLAPDGSEARVS
CCHHHHHHCCCCCCCCCCHHHHEEEEEECCCCCHHHHHHCCCCEEEEEEECCCCCCCEEE
IPAWGRVGDAEAFARDRADWLAGQLARLPESRQIAPDATLPYRGATLQIDWQAAARRKPV
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECHHHHCCCCC
VEGDRVVVGGPLDGLGGRMQRWLEAEALALSTADLGHYCARAGQEVPRLTLSRAQRRWGS
CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
CAADGSIRINWRLVMAPDFVRRSVVAHEVAHMKHFDHSPAFHTHLDELYEGEIDTANRWL
CCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHH
KRHGRTLYVLFG
HHCCCEEEEEEC
>Mature Secondary Structure
MLDWLRRADTRAKEPARPRKVAARTIVVDGRDLPLVIRKLGHARRMTLRLAPDGSEARVS
CCHHHHHHCCCCCCCCCCHHHHEEEEEECCCCCHHHHHHCCCCEEEEEEECCCCCCCEEE
IPAWGRVGDAEAFARDRADWLAGQLARLPESRQIAPDATLPYRGATLQIDWQAAARRKPV
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECHHHHCCCCC
VEGDRVVVGGPLDGLGGRMQRWLEAEALALSTADLGHYCARAGQEVPRLTLSRAQRRWGS
CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
CAADGSIRINWRLVMAPDFVRRSVVAHEVAHMKHFDHSPAFHTHLDELYEGEIDTANRWL
CCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHH
KRHGRTLYVLFG
HHCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA