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The map label for this gene is ycgM [C]

Identifier: 87200439

GI number: 87200439

Start: 2610554

End: 2611399

Strand: Reverse

Name: ycgM [C]

Synonym: Saro_2426

Alternate gene names: 87200439

Gene position: 2611399-2610554 (Counterclockwise)

Preceding gene: 87200440

Following gene: 87200438

Centisome position: 73.32

GC content: 66.78

Gene sequence:

>846_bases
ATGAAGCTGCTGCGTTACGGAAACCCGGGAGAGGAGCGGCCCGGCCTGCTCGACGCGGGCGGCACGGTGCGCGACCTTTC
CGGCCACGTGGCCGACATCGATGGCGCGGCCCTCTCGCCAGAGGTGCTGGACCGGCTTCGCGCGCTCGATCCCGAAACTC
TCCCCGCCGTGGCGGAACCCGGCCGTCTCGGCCCTTGCGTCAACCGCGTCGGCAAGTTCGTGTGCATCGGGCTAAACTAT
TCCGACCACGCCGAGGAAACCGGCGCGACCGTGCCGAGCGAACCGGTCGCCTTCATGAAGGCGACCAGCGCGATCTGCGG
GCCGAACGATCCGGTCATCAAGCCGCGCGGCAGCACCAAGCTCGACTGGGAGGTGGAACTGGCCTTCGTCGTCGGCAGCC
CGGTCAGCTATGCCGACGAGGAAACCGCGCGCGCGGCCATCGCCGGCTACTTCGTCTGCCACGACGTGTCCGAACGCGCT
TTCCAGATGGAGCGGCAGGGGCAGTGGATGAAGGGCAAGGGCTGCGACAGCTTCGGCCCCATCGGCCCGTGGCTGGTCAC
TGCCGACGAAGTGGGCGATCCCGGCCAGCTTGCCATGTGGCTGGAAGTGAACGGCAAGCGCTATCAGGACGGCTCCACGC
AGACGATGGTCTACAAGCCAGCGTTTCTGCTGAGCTACATGTCCCAGTTCATGAGCTTCCAGCCCGGCGACATCATTACC
ACCGGAACCCCGGCGGGCGTCGGGCTCGGCCAGAACCCGCCGGTATTCCTCGACGTGGGCGACGTGGTCGAACTGGGCAT
CGAAAAGCTTGGCACCCAGCGACAGACTGTCGTCCCCGCAACCTGA

Upstream 100 bases:

>100_bases
CCTTCCAGAAGCCGCTTCCCGGCGCGCCGCCGGGTGTCAAATGGCTCCGGGCCCAACCGATCTTCGATCTTGCAGACCAT
ATCAACACGAAGGAAATGCC

Downstream 100 bases:

>100_bases
TCGGAGGTCGCAGCGTGAAGGCCCACGTCCTCCTCGAGGTCTGCGTCGATACGATCGACGATCTCGTCGCCGCGCTCGAT
GGCGGAGCTGAACGGATAGA

Product: 5-carboxymethyl-2-hydroxymuconate delta-isomerase

Products: NA

Alternate protein names: UGL; Ureidoglycolase; Ureidoglycolatase; Ureidoglycolate hydrolase [H]

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MKLLRYGNPGEERPGLLDAGGTVRDLSGHVADIDGAALSPEVLDRLRALDPETLPAVAEPGRLGPCVNRVGKFVCIGLNY
SDHAEETGATVPSEPVAFMKATSAICGPNDPVIKPRGSTKLDWEVELAFVVGSPVSYADEETARAAIAGYFVCHDVSERA
FQMERQGQWMKGKGCDSFGPIGPWLVTADEVGDPGQLAMWLEVNGKRYQDGSTQTMVYKPAFLLSYMSQFMSFQPGDIIT
TGTPAGVGLGQNPPVFLDVGDVVELGIEKLGTQRQTVVPAT

Sequences:

>Translated_281_residues
MKLLRYGNPGEERPGLLDAGGTVRDLSGHVADIDGAALSPEVLDRLRALDPETLPAVAEPGRLGPCVNRVGKFVCIGLNY
SDHAEETGATVPSEPVAFMKATSAICGPNDPVIKPRGSTKLDWEVELAFVVGSPVSYADEETARAAIAGYFVCHDVSERA
FQMERQGQWMKGKGCDSFGPIGPWLVTADEVGDPGQLAMWLEVNGKRYQDGSTQTMVYKPAFLLSYMSQFMSFQPGDIIT
TGTPAGVGLGQNPPVFLDVGDVVELGIEKLGTQRQTVVPAT
>Mature_281_residues
MKLLRYGNPGEERPGLLDAGGTVRDLSGHVADIDGAALSPEVLDRLRALDPETLPAVAEPGRLGPCVNRVGKFVCIGLNY
SDHAEETGATVPSEPVAFMKATSAICGPNDPVIKPRGSTKLDWEVELAFVVGSPVSYADEETARAAIAGYFVCHDVSERA
FQMERQGQWMKGKGCDSFGPIGPWLVTADEVGDPGQLAMWLEVNGKRYQDGSTQTMVYKPAFLLSYMSQFMSFQPGDIIT
TGTPAGVGLGQNPPVFLDVGDVVELGIEKLGTQRQTVVPAT

Specific function: Unknown

COG id: COG0179

COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAH family [H]

Homologues:

Organism=Homo sapiens, GI156231349, Length=213, Percent_Identity=48.8262910798122, Blast_Score=204, Evalue=7e-53,
Organism=Homo sapiens, GI40786394, Length=208, Percent_Identity=47.5961538461538, Blast_Score=194, Evalue=6e-50,
Organism=Homo sapiens, GI215422413, Length=210, Percent_Identity=33.8095238095238, Blast_Score=125, Evalue=4e-29,
Organism=Homo sapiens, GI66348062, Length=202, Percent_Identity=34.6534653465347, Blast_Score=125, Evalue=6e-29,
Organism=Homo sapiens, GI13654274, Length=201, Percent_Identity=34.8258706467662, Blast_Score=124, Evalue=8e-29,
Organism=Escherichia coli, GI1787428, Length=182, Percent_Identity=41.2087912087912, Blast_Score=144, Evalue=6e-36,
Organism=Caenorhabditis elegans, GI17557057, Length=210, Percent_Identity=34.2857142857143, Blast_Score=127, Evalue=6e-30,
Organism=Saccharomyces cerevisiae, GI6324161, Length=212, Percent_Identity=32.0754716981132, Blast_Score=98, Evalue=1e-21,
Organism=Drosophila melanogaster, GI28572127, Length=282, Percent_Identity=36.5248226950355, Blast_Score=167, Evalue=7e-42,
Organism=Drosophila melanogaster, GI24663695, Length=237, Percent_Identity=32.0675105485232, Blast_Score=127, Evalue=8e-30,
Organism=Drosophila melanogaster, GI28571789, Length=203, Percent_Identity=32.0197044334975, Blast_Score=117, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002529
- InterPro:   IPR011234 [H]

Pfam domain/function: PF01557 FAA_hydrolase [H]

EC number: =4.3.2.3 [H]

Molecular weight: Translated: 30015; Mature: 30015

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLRYGNPGEERPGLLDAGGTVRDLSGHVADIDGAALSPEVLDRLRALDPETLPAVAEP
CCCCCCCCCCCCCCCEEECCCCHHHCCCCEEECCCCCCCHHHHHHHHHCCCCCCCCCCCC
GRLGPCVNRVGKFVCIGLNYSDHAEETGATVPSEPVAFMKATSAICGPNDPVIKPRGSTK
CCCCHHHHHCCCEEEEECCCCCCHHHHCCCCCCCCHHHHHHHHHCCCCCCCEECCCCCCC
LDWEVELAFVVGSPVSYADEETARAAIAGYFVCHDVSERAFQMERQGQWMKGKGCDSFGP
CEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
IGPWLVTADEVGDPGQLAMWLEVNGKRYQDGSTQTMVYKPAFLLSYMSQFMSFQPGDIIT
CCCEEEECCCCCCCCCEEEEEEECCEEECCCCCEEEEECHHHHHHHHHHHHCCCCCCEEE
TGTPAGVGLGQNPPVFLDVGDVVELGIEKLGTQRQTVVPAT
CCCCCCCCCCCCCCEEEECHHHHHHHHHHHCCCCCEECCCC
>Mature Secondary Structure
MKLLRYGNPGEERPGLLDAGGTVRDLSGHVADIDGAALSPEVLDRLRALDPETLPAVAEP
CCCCCCCCCCCCCCCEEECCCCHHHCCCCEEECCCCCCCHHHHHHHHHCCCCCCCCCCCC
GRLGPCVNRVGKFVCIGLNYSDHAEETGATVPSEPVAFMKATSAICGPNDPVIKPRGSTK
CCCCHHHHHCCCEEEEECCCCCCHHHHCCCCCCCCHHHHHHHHHCCCCCCCEECCCCCCC
LDWEVELAFVVGSPVSYADEETARAAIAGYFVCHDVSERAFQMERQGQWMKGKGCDSFGP
CEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
IGPWLVTADEVGDPGQLAMWLEVNGKRYQDGSTQTMVYKPAFLLSYMSQFMSFQPGDIIT
CCCEEEECCCCCCCCCEEEEEEECCEEECCCCCEEEEECHHHHHHHHHHHHCCCCCCEEE
TGTPAGVGLGQNPPVFLDVGDVVELGIEKLGTQRQTVVPAT
CCCCCCCCCCCCCCEEEECHHHHHHHHHHHCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA