Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87200440
Identifier: 87200440
GI number: 87200440
Start: 2611396
End: 2611743
Strand: Reverse
Name: 87200440
Synonym: Saro_2427
Alternate gene names: NA
Gene position: 2611743-2611396 (Counterclockwise)
Preceding gene: 87200441
Following gene: 87200439
Centisome position: 73.33
GC content: 66.38
Gene sequence:
>348_bases ATGCGCGAGGTGTTCATGCTCGACCTTGCCGACGAGGCGCTGGCGGCTGCCTACGAGGACTGGCACCGTCCCGGTCGCGT GCCGGCGGGCGTGCTGGCCGACATCGTCGGCTCGGGCATCACCGTGATGGAAATCTACCGCGCCGGCGACCGGCTCGTCA TGATCACCGAAACCTCGGGCGAAGTCCCCGCCGGGGATCGCGTGGCGAGCGAGGCATCGGCCGAGTGGGAAAAGCGGATG GACGCCTTCCAGAAGCCGCTTCCCGGCGCGCCGCCGGGTGTCAAATGGCTCCGGGCCCAACCGATCTTCGATCTTGCAGA CCATATCAACACGAAGGAAATGCCATGA
Upstream 100 bases:
>100_bases ATTCCCTCCAGCTCGGCATGCTGGTCCCGCTGGCCAGCTTCGTCGTCGTTGCGCTGTTCGGCATGTCGGCGCTGCGTGCC CGCGCGGCAGGGAACTGATC
Downstream 100 bases:
>100_bases AGCTGCTGCGTTACGGAAACCCGGGAGAGGAGCGGCCCGGCCTGCTCGACGCGGGCGGCACGGTGCGCGACCTTTCCGGC CACGTGGCCGACATCGATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 115; Mature: 115
Protein sequence:
>115_residues MREVFMLDLADEALAAAYEDWHRPGRVPAGVLADIVGSGITVMEIYRAGDRLVMITETSGEVPAGDRVASEASAEWEKRM DAFQKPLPGAPPGVKWLRAQPIFDLADHINTKEMP
Sequences:
>Translated_115_residues MREVFMLDLADEALAAAYEDWHRPGRVPAGVLADIVGSGITVMEIYRAGDRLVMITETSGEVPAGDRVASEASAEWEKRM DAFQKPLPGAPPGVKWLRAQPIFDLADHINTKEMP >Mature_115_residues MREVFMLDLADEALAAAYEDWHRPGRVPAGVLADIVGSGITVMEIYRAGDRLVMITETSGEVPAGDRVASEASAEWEKRM DAFQKPLPGAPPGVKWLRAQPIFDLADHINTKEMP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12620; Mature: 12620
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREVFMLDLADEALAAAYEDWHRPGRVPAGVLADIVGSGITVMEIYRAGDRLVMITETSG CCCEEEEECHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHCCCEEEEEECCCC EVPAGDRVASEASAEWEKRMDAFQKPLPGAPPGVKWLRAQPIFDLADHINTKEMP CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCHHHHHHCCCCCCCC >Mature Secondary Structure MREVFMLDLADEALAAAYEDWHRPGRVPAGVLADIVGSGITVMEIYRAGDRLVMITETSG CCCEEEEECHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHCCCEEEEEECCCC EVPAGDRVASEASAEWEKRMDAFQKPLPGAPPGVKWLRAQPIFDLADHINTKEMP CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA