Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
---|---|
Accession | NC_007794 |
Length | 3,561,584 |
Click here to switch to the map view.
The map label for this gene is cutC [H]
Identifier: 87200438
GI number: 87200438
Start: 2609778
End: 2610539
Strand: Reverse
Name: cutC [H]
Synonym: Saro_2425
Alternate gene names: 87200438
Gene position: 2610539-2609778 (Counterclockwise)
Preceding gene: 87200439
Following gene: 87200437
Centisome position: 73.3
GC content: 70.47
Gene sequence:
>762_bases GTGAAGGCCCACGTCCTCCTCGAGGTCTGCGTCGATACGATCGACGATCTCGTCGCCGCGCTCGATGGCGGAGCTGAACG GATAGAGCTTTGCTCGGCGCTGTCGGTCGGTGGGCTGACGCCTTCGGCGGGGCTTGCCTCGCGCGCGGTCGAGCTTGCGC AGGCGCAATCGGTGCCGGTGCGGGCGATGGTCCGGCCGCGCGACGGCGATTTCGCCTATTCCGCCGTCGATCTGGAAACG GCGGAGGCGGAAGGCATCGCGCTGCTGAAGCTGGGCGTCGATGGTCTGGTCTTCGGCGCCACCCGGGCGGCATTCCTCGA TCGGGACGCGCTTGGGCGTTGGTGCGATGCCATGCGCCGGGTCAGGCCCGACGTCGGCCTGACGCTGCACCGGGCCATCG ATCTCGTGGCCGATCAACTGGGCGCGGTCGATCTGGCGGCAGAGCTGGGGTTCGACTGCATCCTCTCGTCGGGCGGTGCG GAACGCGCGGTCGAGGGGCTGCCGATACTTGATGCCATGCGCGAGCGGGCGGGGGGACGGATCGCGATCATGCCGGGATC GGGCGTTCGTTCGGCCAACGTCGTGTCGATTGTCGAGGCGACCGGCGTCGGTGCGGTCCACGCATCCGCCGCCGTCGGCG CGGGCGCCGCGCCCGACCCGCGCGTGCTCGAACTCGGCTTCGCCGCCGGACCGCGCCGCCGCACCTGCGCCAGGGAAGTG CACGCATTACGTACGGCGCTCGACACATGGGAGAGCGCATGA
Upstream 100 bases:
>100_bases CGGTATTCCTCGACGTGGGCGACGTGGTCGAACTGGGCATCGAAAAGCTTGGCACCCAGCGACAGACTGTCGTCCCCGCA ACCTGATCGGAGGTCGCAGC
Downstream 100 bases:
>100_bases GCGGGCTTCGCCGCCGGGAGGTTCTCGGCGCGGGCCTGATCGCGGGCACGCTCCCGCTGATGCCACCTGCCGTGGCACGA ACTGCCTCCGACGTCGAGGA
Product: CutC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MKAHVLLEVCVDTIDDLVAALDGGAERIELCSALSVGGLTPSAGLASRAVELAQAQSVPVRAMVRPRDGDFAYSAVDLET AEAEGIALLKLGVDGLVFGATRAAFLDRDALGRWCDAMRRVRPDVGLTLHRAIDLVADQLGAVDLAAELGFDCILSSGGA ERAVEGLPILDAMRERAGGRIAIMPGSGVRSANVVSIVEATGVGAVHASAAVGAGAAPDPRVLELGFAAGPRRRTCAREV HALRTALDTWESA
Sequences:
>Translated_253_residues MKAHVLLEVCVDTIDDLVAALDGGAERIELCSALSVGGLTPSAGLASRAVELAQAQSVPVRAMVRPRDGDFAYSAVDLET AEAEGIALLKLGVDGLVFGATRAAFLDRDALGRWCDAMRRVRPDVGLTLHRAIDLVADQLGAVDLAAELGFDCILSSGGA ERAVEGLPILDAMRERAGGRIAIMPGSGVRSANVVSIVEATGVGAVHASAAVGAGAAPDPRVLELGFAAGPRRRTCAREV HALRTALDTWESA >Mature_253_residues MKAHVLLEVCVDTIDDLVAALDGGAERIELCSALSVGGLTPSAGLASRAVELAQAQSVPVRAMVRPRDGDFAYSAVDLET AEAEGIALLKLGVDGLVFGATRAAFLDRDALGRWCDAMRRVRPDVGLTLHRAIDLVADQLGAVDLAAELGFDCILSSGGA ERAVEGLPILDAMRERAGGRIAIMPGSGVRSANVVSIVEATGVGAVHASAAVGAGAAPDPRVLELGFAAGPRRRTCAREV HALRTALDTWESA
Specific function: Involved in copper homeostasis [H]
COG id: COG3142
COG function: function code P; Uncharacterized protein involved in copper resistance
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CutC family [H]
Homologues:
Organism=Homo sapiens, GI148596990, Length=207, Percent_Identity=42.9951690821256, Blast_Score=153, Evalue=2e-37, Organism=Escherichia coli, GI87081995, Length=209, Percent_Identity=35.8851674641148, Blast_Score=99, Evalue=4e-22, Organism=Caenorhabditis elegans, GI17556905, Length=248, Percent_Identity=36.6935483870968, Blast_Score=144, Evalue=3e-35, Organism=Drosophila melanogaster, GI21355415, Length=240, Percent_Identity=35.8333333333333, Blast_Score=111, Evalue=4e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005627 [H]
Pfam domain/function: PF03932 CutC [H]
EC number: NA
Molecular weight: Translated: 26084; Mature: 26084
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAHVLLEVCVDTIDDLVAALDGGAERIELCSALSVGGLTPSAGLASRAVELAQAQSVPV CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCE RAMVRPRDGDFAYSAVDLETAEAEGIALLKLGVDGLVFGATRAAFLDRDALGRWCDAMRR EEEECCCCCCEEEEEEECCCCCCCCEEEEEECCCCEEHHHHHHHHHCHHHHHHHHHHHHH VRPDVGLTLHRAIDLVADQLGAVDLAAELGFDCILSSGGAERAVEGLPILDAMRERAGGR HCCCCCHHHHHHHHHHHHHHCHHHHHHHCCHHHEECCCCHHHHHCCCCHHHHHHHHCCCE IAIMPGSGVRSANVVSIVEATGVGAVHASAAVGAGAAPDPRVLELGFAAGPRRRTCAREV EEEECCCCCCCCCCEEEEHHCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHH HALRTALDTWESA HHHHHHHHHHCCC >Mature Secondary Structure MKAHVLLEVCVDTIDDLVAALDGGAERIELCSALSVGGLTPSAGLASRAVELAQAQSVPV CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCE RAMVRPRDGDFAYSAVDLETAEAEGIALLKLGVDGLVFGATRAAFLDRDALGRWCDAMRR EEEECCCCCCEEEEEEECCCCCCCCEEEEEECCCCEEHHHHHHHHHCHHHHHHHHHHHHH VRPDVGLTLHRAIDLVADQLGAVDLAAELGFDCILSSGGAERAVEGLPILDAMRERAGGR HCCCCCHHHHHHHHHHHHHHCHHHHHHHCCHHHEECCCCHHHHHCCCCHHHHHHHHCCCE IAIMPGSGVRSANVVSIVEATGVGAVHASAAVGAGAAPDPRVLELGFAAGPRRRTCAREV EEEECCCCCCCCCCEEEEHHCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHH HALRTALDTWESA HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA