Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87199903
Identifier: 87199903
GI number: 87199903
Start: 1992136
End: 1993641
Strand: Reverse
Name: 87199903
Synonym: Saro_1886
Alternate gene names: NA
Gene position: 1993641-1992136 (Counterclockwise)
Preceding gene: 87199904
Following gene: 87199902
Centisome position: 55.98
GC content: 66.0
Gene sequence:
>1506_bases GTGGGAGCATCACTGAACGCAATGCCCCGGCAGAAGCCACGCCAGGATTTCCGGGGCCTGTGGAACATCAGCTTCGGCTA CTTCGGCATCCAGCTCGCCTTCGCGCTGCAAAACGCCAACGTCAGCCGCATCTTCCAGTCGCTCGGCAGCGCGGTCGACG ATCTTGCGTTCCTGTGGATCGCCGGGCCCGTTACCGGCCTGATCGTGCAGCCGCTGATCGGCTACTACTCCGACCGCACC TGGGGACGCCTCGGGCGCCGCCGCCCCTATTTCCTGGCCGGTGCCGTGCTTGCGGGGCTTGCGCTAGTCGGCCTGCCCAA CACCGGCTTGCTCCTCCTCGCTGCGGCGTTCCTGTGGATGCTCGATGCCTCCCTCAACGTGGCGATGGAACCCTTCCGCG CCTTCGCTGGCGACATGACGCCCGACGACCAGCGTGCGCAGGCCTTCGCCTTCCAGACCTGGTTCATCGGCGCGGGCGCG GTCGTCGGCAGCCTTGCCCCGGCCCTGTTCAACTGGCTCGGCATCGCCAACACCGCTCCGGAAGGCATCATTCCGCCCTC CGTGCGCTACAGCTTCTACCTTGGCGCTGCCGCAATGGTTCTCGCGGTGGGATGGACCGTGCTGCGCGTGCGGGAATACA GCCCCGACGAAATGGCCGCTTTCGAAGCGGATGCCACCGCCCCCATCGCTCCGGAACACGAACCTCTCGTTTACCCCCGC TCCGGTCCAGCCTGGGTTGCCGTTGGCGCGGTGCTCGTTGCGATTGTCGCCGCGCTTGGACTGGATCGTCAGCTCTACGT CCTCGGCACGGGCCTCGCAGTGTTTGGCGCCATCCAGATCGGCGTTCGCGCCACGGCGGCCAGAGGCGCGCTTGCACACA TCGTCAGCGACCTTGCGCAAATGCCCGCGCAGATGAAGCAGCTGGCGCTCGCCCAGTTCTTCACCTGGATCGGCTTCTTC ATCGTGTGGATCTACACCACGCCCGTCGTTACCGAACAGGCCTTCGGCGCGACCGACGTTTCCAGCGCCGCCTACAACGA AGGCGCGGACTGGGTCGGCGTGATGTTCGCGTTCTACAACGGGATCGCGGCTGTCTCGGCCTTCCTGCTGCCCGTGCTGG CGCGACGCATCGGCAATGCCAGGACGCATGCGGTCGGCCTCCTGTGCGGCGCCAGCGGCTTCCTCGGGCTGCTGCTGATC CGCGATCCGTGGTGGCTGCTGCTGCCGATGGTCGGAATGGGGATCGCGTGGGCATCTGTCCTGTCGATGCCCTACGTCAT CCTGACCCGCGTGCTGCCAGCGCGCAAGTTCGGCATCTACATCGGAATCTTCAATTTCTTCATCGTCATCCCCCAGCTTG TCGTGGCGACGCTGATGGGCGGCATCATGCGCAGCTTTTTCCCGGGCGAACCCCGCTGGACGATGCTCGTGGCCGCGCTG ATGATGGCCGCTGCCGCAGGGGCGATGATGCTGGTGCGCGAACACAGGAGGGATAGCGCGGCATGA
Upstream 100 bases:
>100_bases CGCGGCCGGATTCTGCGACCAGCCTCGGCAAGACCGCTGAACGGACCGCATCAAAAGGACCGTCACGGATCGCCTCAAGC CACCACATCGGGAGAGCGCC
Downstream 100 bases:
>100_bases GCAAGGACGGACTTATCGGTGCGATCGAGGCGGGCGGGACCAAGTTCATCCTAGCCCTGACCACGCAACAGGGCGAAATT CTCGCCCGCACGCGCCTGCC
Product: major facilitator transporter
Products: NA
Alternate protein names: Sugar Transporter; Transporter Facilitator Family; Facilitator Superfamily Permease; Facilitator Superfamily Protein; SugarCation Symporter; Facilitator Superfamily Transporter Permease; Cytoplasmic Membrane Maltose Transporter MalY; Transport Protein Facilitator Superfamily Protein; MFS Superfamily Sugcific Permease; Facilitator Superfamily Transmembrane Protein; Facilitator Family Transporter; Sucrose Transporter Protein
Number of amino acids: Translated: 501; Mature: 500
Protein sequence:
>501_residues MGASLNAMPRQKPRQDFRGLWNISFGYFGIQLAFALQNANVSRIFQSLGSAVDDLAFLWIAGPVTGLIVQPLIGYYSDRT WGRLGRRRPYFLAGAVLAGLALVGLPNTGLLLLAAAFLWMLDASLNVAMEPFRAFAGDMTPDDQRAQAFAFQTWFIGAGA VVGSLAPALFNWLGIANTAPEGIIPPSVRYSFYLGAAAMVLAVGWTVLRVREYSPDEMAAFEADATAPIAPEHEPLVYPR SGPAWVAVGAVLVAIVAALGLDRQLYVLGTGLAVFGAIQIGVRATAARGALAHIVSDLAQMPAQMKQLALAQFFTWIGFF IVWIYTTPVVTEQAFGATDVSSAAYNEGADWVGVMFAFYNGIAAVSAFLLPVLARRIGNARTHAVGLLCGASGFLGLLLI RDPWWLLLPMVGMGIAWASVLSMPYVILTRVLPARKFGIYIGIFNFFIVIPQLVVATLMGGIMRSFFPGEPRWTMLVAAL MMAAAAGAMMLVREHRRDSAA
Sequences:
>Translated_501_residues MGASLNAMPRQKPRQDFRGLWNISFGYFGIQLAFALQNANVSRIFQSLGSAVDDLAFLWIAGPVTGLIVQPLIGYYSDRT WGRLGRRRPYFLAGAVLAGLALVGLPNTGLLLLAAAFLWMLDASLNVAMEPFRAFAGDMTPDDQRAQAFAFQTWFIGAGA VVGSLAPALFNWLGIANTAPEGIIPPSVRYSFYLGAAAMVLAVGWTVLRVREYSPDEMAAFEADATAPIAPEHEPLVYPR SGPAWVAVGAVLVAIVAALGLDRQLYVLGTGLAVFGAIQIGVRATAARGALAHIVSDLAQMPAQMKQLALAQFFTWIGFF IVWIYTTPVVTEQAFGATDVSSAAYNEGADWVGVMFAFYNGIAAVSAFLLPVLARRIGNARTHAVGLLCGASGFLGLLLI RDPWWLLLPMVGMGIAWASVLSMPYVILTRVLPARKFGIYIGIFNFFIVIPQLVVATLMGGIMRSFFPGEPRWTMLVAAL MMAAAAGAMMLVREHRRDSAA >Mature_500_residues GASLNAMPRQKPRQDFRGLWNISFGYFGIQLAFALQNANVSRIFQSLGSAVDDLAFLWIAGPVTGLIVQPLIGYYSDRTW GRLGRRRPYFLAGAVLAGLALVGLPNTGLLLLAAAFLWMLDASLNVAMEPFRAFAGDMTPDDQRAQAFAFQTWFIGAGAV VGSLAPALFNWLGIANTAPEGIIPPSVRYSFYLGAAAMVLAVGWTVLRVREYSPDEMAAFEADATAPIAPEHEPLVYPRS GPAWVAVGAVLVAIVAALGLDRQLYVLGTGLAVFGAIQIGVRATAARGALAHIVSDLAQMPAQMKQLALAQFFTWIGFFI VWIYTTPVVTEQAFGATDVSSAAYNEGADWVGVMFAFYNGIAAVSAFLLPVLARRIGNARTHAVGLLCGASGFLGLLLIR DPWWLLLPMVGMGIAWASVLSMPYVILTRVLPARKFGIYIGIFNFFIVIPQLVVATLMGGIMRSFFPGEPRWTMLVAALM MAAAAGAMMLVREHRRDSAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI122937193, Length=149, Percent_Identity=30.2013422818792, Blast_Score=66, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53891; Mature: 53760
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGASLNAMPRQKPRQDFRGLWNISFGYFGIQLAFALQNANVSRIFQSLGSAVDDLAFLWI CCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH AGPVTGLIVQPLIGYYSDRTWGRLGRRRPYFLAGAVLAGLALVGLPNTGLLLLAAAFLWM HHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH LDASLNVAMEPFRAFAGDMTPDDQRAQAFAFQTWFIGAGAVVGSLAPALFNWLGIANTAP HHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC EGIIPPSVRYSFYLGAAAMVLAVGWTVLRVREYSPDEMAAFEADATAPIAPEHEPLVYPR CCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHCCCCCCCCCCCCCCCEEECC SGPAWVAVGAVLVAIVAALGLDRQLYVLGTGLAVFGAIQIGVRATAARGALAHIVSDLAQ CCCHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MPAQMKQLALAQFFTWIGFFIVWIYTTPVVTEQAFGATDVSSAAYNEGADWVGVMFAFYN HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHH GIAAVSAFLLPVLARRIGNARTHAVGLLCGASGFLGLLLIRDPWWLLLPMVGMGIAWASV HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LSMPYVILTRVLPARKFGIYIGIFNFFIVIPQLVVATLMGGIMRSFFPGEPRWTMLVAAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH MMAAAAGAMMLVREHRRDSAA HHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GASLNAMPRQKPRQDFRGLWNISFGYFGIQLAFALQNANVSRIFQSLGSAVDDLAFLWI CCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH AGPVTGLIVQPLIGYYSDRTWGRLGRRRPYFLAGAVLAGLALVGLPNTGLLLLAAAFLWM HHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH LDASLNVAMEPFRAFAGDMTPDDQRAQAFAFQTWFIGAGAVVGSLAPALFNWLGIANTAP HHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC EGIIPPSVRYSFYLGAAAMVLAVGWTVLRVREYSPDEMAAFEADATAPIAPEHEPLVYPR CCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHCCCCCCCCCCCCCCCEEECC SGPAWVAVGAVLVAIVAALGLDRQLYVLGTGLAVFGAIQIGVRATAARGALAHIVSDLAQ CCCHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MPAQMKQLALAQFFTWIGFFIVWIYTTPVVTEQAFGATDVSSAAYNEGADWVGVMFAFYN HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHH GIAAVSAFLLPVLARRIGNARTHAVGLLCGASGFLGLLLIRDPWWLLLPMVGMGIAWASV HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LSMPYVILTRVLPARKFGIYIGIFNFFIVIPQLVVATLMGGIMRSFFPGEPRWTMLVAAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH MMAAAAGAMMLVREHRRDSAA HHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA