Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87199845
Identifier: 87199845
GI number: 87199845
Start: 1929593
End: 1930033
Strand: Reverse
Name: 87199845
Synonym: Saro_1828
Alternate gene names: NA
Gene position: 1930033-1929593 (Counterclockwise)
Preceding gene: 87199846
Following gene: 87199840
Centisome position: 54.19
GC content: 64.4
Gene sequence:
>441_bases ATGCCAGCCACCCCAGCCAGCGCGCTCGTTTCGGTCGGTGCCTTGTTTGGCGCCCTGATATCGCAAGCTGTCCCGACCGA GCCGAGGCACATGGCCGCCCGGCCCTGGCAATCGCCGGACCCTGCAGACTATCCCGAAATCGTCGCCGTCACTTACGAAA ACATCCCGGGGCAGAACGCATATCCCATCGGTTCCTATGCCCGGGCGCTGCACCTCGAACCCGCGTCCTGGGCACTTGAC CCGCCATCCGGCCCTCCCGCCGATTTCCCGGGTTATGACACCGTGCGTTACGAGCCCGAACCTGAACTGATCCCCGAAGA TCGGATTGCAGCACCAGACCTGCGCGAGACCAGTGGTCCGGACGAGCCGACTTCGCCGCCGGCCGAAGACGAAGAGCCGG AAATGGGCCAGGTCGTCACCATGGAAGCGCCAATCACGTAA
Upstream 100 bases:
>100_bases CAAAGGGCGCTCCCGAACGGGGCGCCCTTCTGCTTTGGCGGAACCGTAACGGGCCAACGGGCATTTCTCCAGGCGATGGA TGGATCGCAGGAGCAAACGA
Downstream 100 bases:
>100_bases AGGACTTCGGCCCCCCGCCCACGACCCTCACGGCAAGGCCGCTAGCAGGTTCGCGGGCACCGTGCTCGACGATGACCGCT TCCAACCGGGCCCGCACCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MPATPASALVSVGALFGALISQAVPTEPRHMAARPWQSPDPADYPEIVAVTYENIPGQNAYPIGSYARALHLEPASWALD PPSGPPADFPGYDTVRYEPEPELIPEDRIAAPDLRETSGPDEPTSPPAEDEEPEMGQVVTMEAPIT
Sequences:
>Translated_146_residues MPATPASALVSVGALFGALISQAVPTEPRHMAARPWQSPDPADYPEIVAVTYENIPGQNAYPIGSYARALHLEPASWALD PPSGPPADFPGYDTVRYEPEPELIPEDRIAAPDLRETSGPDEPTSPPAEDEEPEMGQVVTMEAPIT >Mature_145_residues PATPASALVSVGALFGALISQAVPTEPRHMAARPWQSPDPADYPEIVAVTYENIPGQNAYPIGSYARALHLEPASWALDP PSGPPADFPGYDTVRYEPEPELIPEDRIAAPDLRETSGPDEPTSPPAEDEEPEMGQVVTMEAPIT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15599; Mature: 15468
Theoretical pI: Translated: 3.75; Mature: 3.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPATPASALVSVGALFGALISQAVPTEPRHMAARPWQSPDPADYPEIVAVTYENIPGQNA CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC YPIGSYARALHLEPASWALDPPSGPPADFPGYDTVRYEPEPELIPEDRIAAPDLRETSGP CCCCCHHHEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC DEPTSPPAEDEEPEMGQVVTMEAPIT CCCCCCCCCCCCCCCCCEEEECCCCC >Mature Secondary Structure PATPASALVSVGALFGALISQAVPTEPRHMAARPWQSPDPADYPEIVAVTYENIPGQNA CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC YPIGSYARALHLEPASWALDPPSGPPADFPGYDTVRYEPEPELIPEDRIAAPDLRETSGP CCCCCHHHEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC DEPTSPPAEDEEPEMGQVVTMEAPIT CCCCCCCCCCCCCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA