Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87199815
Identifier: 87199815
GI number: 87199815
Start: 1895894
End: 1896814
Strand: Reverse
Name: 87199815
Synonym: Saro_1798
Alternate gene names: NA
Gene position: 1896814-1895894 (Counterclockwise)
Preceding gene: 87199816
Following gene: 87199814
Centisome position: 53.26
GC content: 66.23
Gene sequence:
>921_bases ATGAGTCGCTTTTCCAGGATCGTCGTTGCTTTCCTCATCTTGCTTGCGGCGGCCTACTACTGGCTCCTGGTCAACCGGGG GCAACCGGCCCTGCCCGGCCGCAGCATCGATATCGCAGCTCTTCGCAAGGCGTCGGACGCCATGCCGGGCGAGAAGCCGA CCGGACTGGAATATGCGATCATCGCAACCCGGCGCATTCCCGGCGCCGCACTGGCGGCAGGAACGGGGCTCAGGCCAATT TCCAGCGGCGTTGTCGTCTGGCGAATCGTCACGCCGCGCGGCGGCATCGTGATCGACAGCGGCCTTTCGCGAAACGATGC CGCCTCGATGGGCTTCAAGGAATACGACGGCCGCGCGATGGCACTGGCGGGCCGCTGGATGGAGCAGGCCGAGCTTCTTC TGTTCACGCACGAGCATGTCGACCACGTCGGCGGATTTCTCGATCACCAGCCATTCCAGGCCGTGGCGGGCAAGGCCGTG CTTTCGCCGCGCATGCTCCAGGGCATGAATGCGCTCTGGCGCGAGAATGCGCGGCTGTTGCCTCCGCCACGCTTGGCGGA GCCGGTCCAGCCCGTGGCGCCAGGCGTGGTGCTGGTCGCCACGCCGGGGCATACGCCGGCTTCCCAGATGATCTATGTCC GGCTTGCCGATGGTCGGGAATATCTGTTCGCCGGAGATACCGCCTCGCTGCGCGCCAACTACGAGATACCGACGCCGCGC TCCCGGCTCGTCGCCGACTGGCTGGCACCAGAGGACCGGCCGGTTGCCTTCGCCTGGCTCGACGCGCTCAAGCGCCTGAA GGCCAGGCACGAGGCGCTGGTGATAGTGCCCTCGCATGATCCCGACTGGATTGCCGCCACCGCTGCGAAGGCCGGCTTCA GTCGCCTTCCCGCCCCCGCAAAAACCCTATCAGTCAATTAG
Upstream 100 bases:
>100_bases CTGTTCACGCGCGGCGGCGAGGACGTCGACCGGCTCGGCCCCGCGCTTGCAGCGCACGGGCTTGGCCGCATCGGGATATT CTGACGGTGGGGGCCGTTCA
Downstream 100 bases:
>100_bases ATCCGACTTTCGGATGGTTGTGCCAAATGATGCTGGCATTGCCGGGGCAACAGGCGTAGAAGCCGCTCATTCGCCGGGTG GCCCAGAGGGATCGGGCCTC
Product: beta-lactamase-like protein
Products: NA
Alternate protein names: Beta-Lactamase Domain-Containing Protein
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MSRFSRIVVAFLILLAAAYYWLLVNRGQPALPGRSIDIAALRKASDAMPGEKPTGLEYAIIATRRIPGAALAAGTGLRPI SSGVVVWRIVTPRGGIVIDSGLSRNDAASMGFKEYDGRAMALAGRWMEQAELLLFTHEHVDHVGGFLDHQPFQAVAGKAV LSPRMLQGMNALWRENARLLPPPRLAEPVQPVAPGVVLVATPGHTPASQMIYVRLADGREYLFAGDTASLRANYEIPTPR SRLVADWLAPEDRPVAFAWLDALKRLKARHEALVIVPSHDPDWIAATAAKAGFSRLPAPAKTLSVN
Sequences:
>Translated_306_residues MSRFSRIVVAFLILLAAAYYWLLVNRGQPALPGRSIDIAALRKASDAMPGEKPTGLEYAIIATRRIPGAALAAGTGLRPI SSGVVVWRIVTPRGGIVIDSGLSRNDAASMGFKEYDGRAMALAGRWMEQAELLLFTHEHVDHVGGFLDHQPFQAVAGKAV LSPRMLQGMNALWRENARLLPPPRLAEPVQPVAPGVVLVATPGHTPASQMIYVRLADGREYLFAGDTASLRANYEIPTPR SRLVADWLAPEDRPVAFAWLDALKRLKARHEALVIVPSHDPDWIAATAAKAGFSRLPAPAKTLSVN >Mature_305_residues SRFSRIVVAFLILLAAAYYWLLVNRGQPALPGRSIDIAALRKASDAMPGEKPTGLEYAIIATRRIPGAALAAGTGLRPIS SGVVVWRIVTPRGGIVIDSGLSRNDAASMGFKEYDGRAMALAGRWMEQAELLLFTHEHVDHVGGFLDHQPFQAVAGKAVL SPRMLQGMNALWRENARLLPPPRLAEPVQPVAPGVVLVATPGHTPASQMIYVRLADGREYLFAGDTASLRANYEIPTPRS RLVADWLAPEDRPVAFAWLDALKRLKARHEALVIVPSHDPDWIAATAAKAGFSRLPAPAKTLSVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33109; Mature: 32978
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRFSRIVVAFLILLAAAYYWLLVNRGQPALPGRSIDIAALRKASDAMPGEKPTGLEYAI CCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEE IATRRIPGAALAAGTGLRPISSGVVVWRIVTPRGGIVIDSGLSRNDAASMGFKEYDGRAM EEECCCCCHHHHCCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCCHHHCCCHHCCCCEE ALAGRWMEQAELLLFTHEHVDHVGGFLDHQPFQAVAGKAVLSPRMLQGMNALWRENARLL EEHHHHHHHHHEEEEEHHHHHHHCCCCCCCCHHHHHCHHHCCHHHHHHHHHHHHCCCCCC PPPRLAEPVQPVAPGVVLVATPGHTPASQMIYVRLADGREYLFAGDTASLRANYEIPTPR CCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEECCCEEEEECCCCEEEEECCCCCCH SRLVADWLAPEDRPVAFAWLDALKRLKARHEALVIVPSHDPDWIAATAAKAGFSRLPAPA HHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCEEHHHHHHHHHHCCCCC KTLSVN CEEECC >Mature Secondary Structure SRFSRIVVAFLILLAAAYYWLLVNRGQPALPGRSIDIAALRKASDAMPGEKPTGLEYAI CHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEE IATRRIPGAALAAGTGLRPISSGVVVWRIVTPRGGIVIDSGLSRNDAASMGFKEYDGRAM EEECCCCCHHHHCCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCCHHHCCCHHCCCCEE ALAGRWMEQAELLLFTHEHVDHVGGFLDHQPFQAVAGKAVLSPRMLQGMNALWRENARLL EEHHHHHHHHHEEEEEHHHHHHHCCCCCCCCHHHHHCHHHCCHHHHHHHHHHHHCCCCCC PPPRLAEPVQPVAPGVVLVATPGHTPASQMIYVRLADGREYLFAGDTASLRANYEIPTPR CCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEECCCEEEEECCCCEEEEECCCCCCH SRLVADWLAPEDRPVAFAWLDALKRLKARHEALVIVPSHDPDWIAATAAKAGFSRLPAPA HHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCEEHHHHHHHHHHCCCCC KTLSVN CEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA