Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is murI [H]

Identifier: 87199816

GI number: 87199816

Start: 1896831

End: 1897664

Strand: Reverse

Name: murI [H]

Synonym: Saro_1799

Alternate gene names: 87199816

Gene position: 1897664-1896831 (Counterclockwise)

Preceding gene: 87199821

Following gene: 87199815

Centisome position: 53.28

GC content: 70.14

Gene sequence:

>834_bases
ATGACGGGAACGGGCACAGTTGCGAACCAAGCGGCCACGGTCGATCCGGGAGCGCCGCTGCTCCTGTTCGATTCGGGCGT
TGGCGGGCTTTCGGTGCTGCGCAAGGTGCGGGCCGTGCTGCCCGAGGCTCCGGTCATCTACGTCGCCGACAACGCCGGCC
TTCCCTATGGCGCGAAGACCGAAGCGCAGATCGCCGCGCGCGTCTCGGGTCTGCTCGGCCGACTGACGGAACGGCTGGCG
CCCCGCCTGGTGTGCATCGCCTGCAATACGGCGTCGACCATTGCCCTGGCATCGGTCCGCGAAGTGCTGGAAGTGCCGAT
CGTTGGCACCGTTCCGGCGATCAAGCCTGCCGCCGCGCTTACCCGCACCGGCGTCATCGGGCTTCTTGGCACCGAAGCGA
CGATCCGGCAGGCCTATGTCGACCGGCTCGAGGCGGAGTTCGCCGCCGACAAGCACCTGCTGCGCCACGGCGCGCCCGAA
CTCGTAGCCGCGGCCGAAGCCAAGCTGCGCGGCGAACGGGTCGATCCGGCCGTCTATGCCCGGGCCGCAGCGGCCCTGCG
CGCGATGCCCGGCGGAGACCGGATCGACACGGTGGTGCTTGCCTGTACGCACTTCCCGCTGGTCGAGGACGAATTGCGCG
AAGCCTTCGGGCCGGAAGTCCGGTTCGTCGACGGATCGGACGGCATTGCCCGCCGCATCGCCCACCTCACGCAGGGACAG
GCCTGGCGCAGGACGGAACCCGACCTCGCGCTGTTCACGCGCGGCGGCGAGGACGTCGACCGGCTCGGCCCCGCGCTTGC
AGCGCACGGGCTTGGCCGCATCGGGATATTCTGA

Upstream 100 bases:

>100_bases
AGGCAAGAGCGTTTCCACGCCGCACTCCATACCCAATCCGACGAGAAAAGCGAAAGAGGGCTGTTTCCATTTTGCCCCCA
TTACCGATACAAGCCGGGCG

Downstream 100 bases:

>100_bases
CGGTGGGGGCCGTTCAATGAGTCGCTTTTCCAGGATCGTCGTTGCTTTCCTCATCTTGCTTGCGGCGGCCTACTACTGGC
TCCTGGTCAACCGGGGGCAA

Product: glutamate racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MTGTGTVANQAATVDPGAPLLLFDSGVGGLSVLRKVRAVLPEAPVIYVADNAGLPYGAKTEAQIAARVSGLLGRLTERLA
PRLVCIACNTASTIALASVREVLEVPIVGTVPAIKPAAALTRTGVIGLLGTEATIRQAYVDRLEAEFAADKHLLRHGAPE
LVAAAEAKLRGERVDPAVYARAAAALRAMPGGDRIDTVVLACTHFPLVEDELREAFGPEVRFVDGSDGIARRIAHLTQGQ
AWRRTEPDLALFTRGGEDVDRLGPALAAHGLGRIGIF

Sequences:

>Translated_277_residues
MTGTGTVANQAATVDPGAPLLLFDSGVGGLSVLRKVRAVLPEAPVIYVADNAGLPYGAKTEAQIAARVSGLLGRLTERLA
PRLVCIACNTASTIALASVREVLEVPIVGTVPAIKPAAALTRTGVIGLLGTEATIRQAYVDRLEAEFAADKHLLRHGAPE
LVAAAEAKLRGERVDPAVYARAAAALRAMPGGDRIDTVVLACTHFPLVEDELREAFGPEVRFVDGSDGIARRIAHLTQGQ
AWRRTEPDLALFTRGGEDVDRLGPALAAHGLGRIGIF
>Mature_276_residues
TGTGTVANQAATVDPGAPLLLFDSGVGGLSVLRKVRAVLPEAPVIYVADNAGLPYGAKTEAQIAARVSGLLGRLTERLAP
RLVCIACNTASTIALASVREVLEVPIVGTVPAIKPAAALTRTGVIGLLGTEATIRQAYVDRLEAEFAADKHLLRHGAPEL
VAAAEAKLRGERVDPAVYARAAAALRAMPGGDRIDTVVLACTHFPLVEDELREAFGPEVRFVDGSDGIARRIAHLTQGQA
WRRTEPDLALFTRGGEDVDRLGPALAAHGLGRIGIF

Specific function: Provides the (R)-glutamate required for cell wall biosynthesis [H]

COG id: COG0796

COG function: function code M; Glutamate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

Organism=Escherichia coli, GI87082355, Length=259, Percent_Identity=40.9266409266409, Blast_Score=170, Evalue=1e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004391 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: =5.1.1.3 [H]

Molecular weight: Translated: 28984; Mature: 28853

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: PS00924 ASP_GLU_RACEMASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGTGTVANQAATVDPGAPLLLFDSGVGGLSVLRKVRAVLPEAPVIYVADNAGLPYGAKT
CCCCCCCCCCCEECCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCC
EAQIAARVSGLLGRLTERLAPRLVCIACNTASTIALASVREVLEVPIVGTVPAIKPAAAL
HHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
TRTGVIGLLGTEATIRQAYVDRLEAEFAADKHLLRHGAPELVAAAEAKLRGERVDPAVYA
HHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHH
RAAAALRAMPGGDRIDTVVLACTHFPLVEDELREAFGPEVRFVDGSDGIARRIAHLTQGQ
HHHHHHHCCCCCCHHHHHEEHHHCCCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCC
AWRRTEPDLALFTRGGEDVDRLGPALAAHGLGRIGIF
CCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TGTGTVANQAATVDPGAPLLLFDSGVGGLSVLRKVRAVLPEAPVIYVADNAGLPYGAKT
CCCCCCCCCCEECCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCC
EAQIAARVSGLLGRLTERLAPRLVCIACNTASTIALASVREVLEVPIVGTVPAIKPAAAL
HHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
TRTGVIGLLGTEATIRQAYVDRLEAEFAADKHLLRHGAPELVAAAEAKLRGERVDPAVYA
HHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHH
RAAAALRAMPGGDRIDTVVLACTHFPLVEDELREAFGPEVRFVDGSDGIARRIAHLTQGQ
HHHHHHHCCCCCCHHHHHEEHHHCCCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCC
AWRRTEPDLALFTRGGEDVDRLGPALAAHGLGRIGIF
CCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA