Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is accA1 [H]
Identifier: 87199659
GI number: 87199659
Start: 1716319
End: 1718190
Strand: Reverse
Name: accA1 [H]
Synonym: Saro_1642
Alternate gene names: 87199659
Gene position: 1718190-1716319 (Counterclockwise)
Preceding gene: 87199660
Following gene: 87199658
Centisome position: 48.24
GC content: 67.36
Gene sequence:
>1872_bases ATGATCAAATCCCTCCTCGTCGCCAATCGCGGCGAAATTGCCTGTCGCGTGATCCGTACAGCGCGGCGCATGGGCGTTCG CACAGTGGCGGTCTATTCCGATGCCGATGCCAATGCCCTGCACGTCCGCTCGGCCGACGAAGCAGTCCACATAGGTCCGG CAGCAGCGCGCGAAAGCTATCTGGTGGGAGAGCGCATCATTGCCGCCGCGCTCACCACTGGCGCTGAGGCCATCCACCCC GGCTATGGGTTCCTCTCGGAGAATGCCGAGTTCGCTCAGGCCGTTCTCGACGCGGGCCTGGTCTGGGTTGGCCCGAAGCC GCACTCGATCACCGCGATGGGCCTCAAGGACGCCGCCAAGGCCCGCATGATCGCGGCAGGCGTGCCGGTGACGCCGGGAT ATCTGGGCGAGGATCAATCGGCGGAGCGATTGCAGGCCGAGGCCGACGCCATCGGCTACCCGGTACTGATCAAGGCCGTC GCGGGCGGAGGCGGCAAGGGCATGCGGCGCGTCGATGCCGCGGCGGACTTTGCCGAAGCGCTCGCCTCGTGCCGCCGTGA GGCTGCCTCCTCGTTCGGCGACGACCGTGTGCTTATCGAGAAGTACATCCTTTCCCCGCGGCACATTGAGGTTCAGGTCT TCGGCGACGCCCACGGCAACGTCGTCCACCTGTTCGAACGCGACTGCTCGCTTCAGCGGCGGCACCAGAAGGTGATCGAG GAGGCCCCTGCGCCCGGCATGGACGAAGCGACCCGCGAGGCTGTCTGCGCGGCCGCCGTCCGCGCGGCCAAGGCGGTCGA CTATGAAGGCGCGGGCACCATCGAATTCATCGCCGATGGCTCCGAAGGCCTGCGCGCGGACCGGATCTGGTTCATGGAAA TGAACACGCGCCTGCAGGTGGAACATCCGGTGACCGAGGAGATCACCGGCGTCGACCTCGTCGAATGGCAGCTCCGCGTC GCGTCGGGTGAGCCGCTGCCCAAGCGGCAAGACGAGCTATCGATCAACGGCTGGGCGATGGAAGCCCGGCTCTACGCCGA GGACCCGACCCGGGGCTTCCTGCCCAGCATCGGGCGCGTCGACGATTTCCACTTCCCGCACCATCATGCGCGCATTGATA CGGGGGTAGAGGCGGGCGCGGAAATCTCGCCCTTCTACGATCCGATGATCGCCAAGCTCATCGTCCACCGCCCGACCCGG ACTGAAGCCGTCTCTGCGCTGCGCGAGACACTTGACGAAGGCATCGTCGGACCGCTCGTCACCAACAGCGGCTTCCTCTG GCGCCTGCTGGGCCACGCGGCGTTCGAGGCCGGGGTCGTCGACACCGGCCTGATCGAGCGCAATCTCGAAACCCTCGCCA CCCGGCCCGAGCCTTCCCGCGAGGGTCTGGCTCTGGCCGCAATGCGCCTTGCCGGCACGCCGGGCGCGACGCCATGGTCG AGCCGGTCCGGCTTCCGCATGAACGCTGCCCCGCGCCGCGACGTTCGTCTTTCCGACCAGTTCGGCCGGACGTTCACGAC CGAACTGCCACCCGAACCGGCGTTCGACTACTGGCCCGGCGAAGACGCGACGACGATCGACGAAGGTGGCGAGCGCTTTC GCGTGCGCCTGGCGCGGGCCGACGGGGGCTCCGGCGGCGCAGCCTCGGATGGGGCCATCCTCGCCCCCATGCCCGGCAAG GTCATCTCGGTCGATGTATCCGCAGGCCAGTCGGTGACCAAGGGCCAGAAACTCATGGTGCTCGAGGCAATGAAGATGGA ACATGCCCTCACCGCCCCCTTCGACGGTGTCGTGGCCGAACTCAACGCCGCGCCGGGCGGACAGGTTCAGGTCGAGGCAC TGCTGGCGAAGATCGAAAAGGGAGAAGCCTGA
Upstream 100 bases:
>100_bases CCCGCGACGTGCTGGGGCTCGCCCTCGAGGCCTGTCTCGAAGCGCCGATTGCGGAGGCGCCCCGGTTCGGGGTGTTCAGG ATGTGATGGAGGCCAGACCG
Downstream 100 bases:
>100_bases TGGCTGGCAAGTTCTTCGACGAGTGGCAGGTGGGCGACCGGATCAGCCACGAAATCCGCCGCACCGTGACAGAGACCGAC AATCTCCTGTTCTCGACCAT
Product: carbamoyl-phosphate synthase L chain, ATP-binding
Products: NA
Alternate protein names: Biotin carboxylase; Biotin carboxyl carrier protein; BCCP [H]
Number of amino acids: Translated: 623; Mature: 623
Protein sequence:
>623_residues MIKSLLVANRGEIACRVIRTARRMGVRTVAVYSDADANALHVRSADEAVHIGPAAARESYLVGERIIAAALTTGAEAIHP GYGFLSENAEFAQAVLDAGLVWVGPKPHSITAMGLKDAAKARMIAAGVPVTPGYLGEDQSAERLQAEADAIGYPVLIKAV AGGGGKGMRRVDAAADFAEALASCRREAASSFGDDRVLIEKYILSPRHIEVQVFGDAHGNVVHLFERDCSLQRRHQKVIE EAPAPGMDEATREAVCAAAVRAAKAVDYEGAGTIEFIADGSEGLRADRIWFMEMNTRLQVEHPVTEEITGVDLVEWQLRV ASGEPLPKRQDELSINGWAMEARLYAEDPTRGFLPSIGRVDDFHFPHHHARIDTGVEAGAEISPFYDPMIAKLIVHRPTR TEAVSALRETLDEGIVGPLVTNSGFLWRLLGHAAFEAGVVDTGLIERNLETLATRPEPSREGLALAAMRLAGTPGATPWS SRSGFRMNAAPRRDVRLSDQFGRTFTTELPPEPAFDYWPGEDATTIDEGGERFRVRLARADGGSGGAASDGAILAPMPGK VISVDVSAGQSVTKGQKLMVLEAMKMEHALTAPFDGVVAELNAAPGGQVQVEALLAKIEKGEA
Sequences:
>Translated_623_residues MIKSLLVANRGEIACRVIRTARRMGVRTVAVYSDADANALHVRSADEAVHIGPAAARESYLVGERIIAAALTTGAEAIHP GYGFLSENAEFAQAVLDAGLVWVGPKPHSITAMGLKDAAKARMIAAGVPVTPGYLGEDQSAERLQAEADAIGYPVLIKAV AGGGGKGMRRVDAAADFAEALASCRREAASSFGDDRVLIEKYILSPRHIEVQVFGDAHGNVVHLFERDCSLQRRHQKVIE EAPAPGMDEATREAVCAAAVRAAKAVDYEGAGTIEFIADGSEGLRADRIWFMEMNTRLQVEHPVTEEITGVDLVEWQLRV ASGEPLPKRQDELSINGWAMEARLYAEDPTRGFLPSIGRVDDFHFPHHHARIDTGVEAGAEISPFYDPMIAKLIVHRPTR TEAVSALRETLDEGIVGPLVTNSGFLWRLLGHAAFEAGVVDTGLIERNLETLATRPEPSREGLALAAMRLAGTPGATPWS SRSGFRMNAAPRRDVRLSDQFGRTFTTELPPEPAFDYWPGEDATTIDEGGERFRVRLARADGGSGGAASDGAILAPMPGK VISVDVSAGQSVTKGQKLMVLEAMKMEHALTAPFDGVVAELNAAPGGQVQVEALLAKIEKGEA >Mature_623_residues MIKSLLVANRGEIACRVIRTARRMGVRTVAVYSDADANALHVRSADEAVHIGPAAARESYLVGERIIAAALTTGAEAIHP GYGFLSENAEFAQAVLDAGLVWVGPKPHSITAMGLKDAAKARMIAAGVPVTPGYLGEDQSAERLQAEADAIGYPVLIKAV AGGGGKGMRRVDAAADFAEALASCRREAASSFGDDRVLIEKYILSPRHIEVQVFGDAHGNVVHLFERDCSLQRRHQKVIE EAPAPGMDEATREAVCAAAVRAAKAVDYEGAGTIEFIADGSEGLRADRIWFMEMNTRLQVEHPVTEEITGVDLVEWQLRV ASGEPLPKRQDELSINGWAMEARLYAEDPTRGFLPSIGRVDDFHFPHHHARIDTGVEAGAEISPFYDPMIAKLIVHRPTR TEAVSALRETLDEGIVGPLVTNSGFLWRLLGHAAFEAGVVDTGLIERNLETLATRPEPSREGLALAAMRLAGTPGATPWS SRSGFRMNAAPRRDVRLSDQFGRTFTTELPPEPAFDYWPGEDATTIDEGGERFRVRLARADGGSGGAASDGAILAPMPGK VISVDVSAGQSVTKGQKLMVLEAMKMEHALTAPFDGVVAELNAAPGGQVQVEALLAKIEKGEA
Specific function: This protein carries two functions:biotin carboxyl carrier protein and biotin carboxyltransferase [H]
COG id: COG4770
COG function: function code I; Acetyl/propionyl-CoA carboxylase, alpha subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 biotinyl-binding domain [H]
Homologues:
Organism=Homo sapiens, GI116805327, Length=677, Percent_Identity=45.642540620384, Blast_Score=552, Evalue=1e-157, Organism=Homo sapiens, GI295821183, Length=642, Percent_Identity=40.9657320872274, Blast_Score=426, Evalue=1e-119, Organism=Homo sapiens, GI189095269, Length=444, Percent_Identity=50, Blast_Score=419, Evalue=1e-117, Organism=Homo sapiens, GI65506442, Length=444, Percent_Identity=50, Blast_Score=419, Evalue=1e-117, Organism=Homo sapiens, GI106049528, Length=465, Percent_Identity=44.7311827956989, Blast_Score=366, Evalue=1e-101, Organism=Homo sapiens, GI106049295, Length=465, Percent_Identity=44.7311827956989, Blast_Score=366, Evalue=1e-101, Organism=Homo sapiens, GI106049292, Length=465, Percent_Identity=44.7311827956989, Blast_Score=366, Evalue=1e-101, Organism=Homo sapiens, GI38679960, Length=723, Percent_Identity=28.2157676348548, Blast_Score=225, Evalue=8e-59, Organism=Homo sapiens, GI38679977, Length=723, Percent_Identity=28.2157676348548, Blast_Score=225, Evalue=8e-59, Organism=Homo sapiens, GI38679967, Length=723, Percent_Identity=28.2157676348548, Blast_Score=225, Evalue=8e-59, Organism=Homo sapiens, GI38679971, Length=723, Percent_Identity=28.2157676348548, Blast_Score=225, Evalue=9e-59, Organism=Homo sapiens, GI38679974, Length=723, Percent_Identity=28.2157676348548, Blast_Score=225, Evalue=9e-59, Organism=Homo sapiens, GI134142062, Length=510, Percent_Identity=30.7843137254902, Blast_Score=204, Evalue=3e-52, Organism=Escherichia coli, GI1789654, Length=453, Percent_Identity=46.5783664459161, Blast_Score=383, Evalue=1e-107, Organism=Caenorhabditis elegans, GI71987519, Length=665, Percent_Identity=47.218045112782, Blast_Score=516, Evalue=1e-147, Organism=Caenorhabditis elegans, GI17567343, Length=445, Percent_Identity=48.9887640449438, Blast_Score=414, Evalue=1e-116, Organism=Caenorhabditis elegans, GI17562816, Length=468, Percent_Identity=42.5213675213675, Blast_Score=340, Evalue=1e-93, Organism=Caenorhabditis elegans, GI71997168, Length=514, Percent_Identity=29.5719844357977, Blast_Score=196, Evalue=3e-50, Organism=Caenorhabditis elegans, GI71997163, Length=514, Percent_Identity=29.5719844357977, Blast_Score=194, Evalue=1e-49, Organism=Caenorhabditis elegans, GI133931226, Length=496, Percent_Identity=29.8387096774194, Blast_Score=187, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6319685, Length=446, Percent_Identity=44.6188340807175, Blast_Score=384, Evalue=1e-107, Organism=Saccharomyces cerevisiae, GI6319695, Length=456, Percent_Identity=41.0087719298246, Blast_Score=312, Evalue=8e-86, Organism=Saccharomyces cerevisiae, GI6321376, Length=456, Percent_Identity=41.6666666666667, Blast_Score=307, Evalue=4e-84, Organism=Saccharomyces cerevisiae, GI6324343, Length=714, Percent_Identity=26.6106442577031, Blast_Score=204, Evalue=3e-53, Organism=Saccharomyces cerevisiae, GI6323863, Length=494, Percent_Identity=29.7570850202429, Blast_Score=195, Evalue=2e-50, Organism=Drosophila melanogaster, GI24651757, Length=670, Percent_Identity=45.6716417910448, Blast_Score=523, Evalue=1e-148, Organism=Drosophila melanogaster, GI24651759, Length=632, Percent_Identity=44.3037974683544, Blast_Score=466, Evalue=1e-131, Organism=Drosophila melanogaster, GI24652212, Length=473, Percent_Identity=43.7632135306554, Blast_Score=352, Evalue=3e-97, Organism=Drosophila melanogaster, GI24652210, Length=473, Percent_Identity=43.7632135306554, Blast_Score=352, Evalue=3e-97, Organism=Drosophila melanogaster, GI24652214, Length=473, Percent_Identity=43.7632135306554, Blast_Score=352, Evalue=3e-97, Organism=Drosophila melanogaster, GI19921944, Length=473, Percent_Identity=43.7632135306554, Blast_Score=352, Evalue=3e-97, Organism=Drosophila melanogaster, GI24652216, Length=473, Percent_Identity=43.7632135306554, Blast_Score=352, Evalue=3e-97, Organism=Drosophila melanogaster, GI281363050, Length=473, Percent_Identity=43.7632135306554, Blast_Score=352, Evalue=4e-97, Organism=Drosophila melanogaster, GI24652224, Length=473, Percent_Identity=43.7632135306554, Blast_Score=352, Evalue=4e-97, Organism=Drosophila melanogaster, GI24652222, Length=473, Percent_Identity=43.7632135306554, Blast_Score=352, Evalue=4e-97, Organism=Drosophila melanogaster, GI24652220, Length=473, Percent_Identity=43.7632135306554, Blast_Score=352, Evalue=4e-97, Organism=Drosophila melanogaster, GI24652218, Length=473, Percent_Identity=43.7632135306554, Blast_Score=352, Evalue=4e-97, Organism=Drosophila melanogaster, GI161076409, Length=713, Percent_Identity=28.6115007012623, Blast_Score=216, Evalue=3e-56, Organism=Drosophila melanogaster, GI24586458, Length=713, Percent_Identity=28.6115007012623, Blast_Score=216, Evalue=4e-56, Organism=Drosophila melanogaster, GI161076407, Length=713, Percent_Identity=28.6115007012623, Blast_Score=216, Evalue=4e-56, Organism=Drosophila melanogaster, GI24586460, Length=713, Percent_Identity=28.6115007012623, Blast_Score=216, Evalue=4e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011761 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR001882 - InterPro: IPR011764 - InterPro: IPR005482 - InterPro: IPR000089 - InterPro: IPR005479 - InterPro: IPR005481 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 - InterPro: IPR011053 [H]
Pfam domain/function: PF02785 Biotin_carb_C; PF00364 Biotin_lipoyl; PF00289 CPSase_L_chain; PF02786 CPSase_L_D2 [H]
EC number: =6.3.4.14 [H]
Molecular weight: Translated: 66676; Mature: 66676
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: PS50975 ATP_GRASP ; PS00136 SUBTILASE_ASP ; PS00867 CPSASE_2 ; PS50979 BC ; PS50968 BIOTINYL_LIPOYL ; PS00188 BIOTIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKSLLVANRGEIACRVIRTARRMGVRTVAVYSDADANALHVRSADEAVHIGPAAARESY CCCCEEECCCCHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEECCCCEEEECCHHHHHHH LVGERIIAAALTTGAEAIHPGYGFLSENAEFAQAVLDAGLVWVGPKPHSITAMGLKDAAK HHHHHHHHHHHHCCCHHCCCCCCCCCCCHHHHHHHHHCCEEEECCCCCCEEEECCHHHHH ARMIAAGVPVTPGYLGEDQSAERLQAEADAIGYPVLIKAVAGGGGKGMRRVDAAADFAEA HHEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHH LASCRREAASSFGDDRVLIEKYILSPRHIEVQVFGDAHGNVVHLFERDCSLQRRHQKVIE HHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEEECCCCCEEEEEHHCCHHHHHHHHHHH EAPAPGMDEATREAVCAAAVRAAKAVDYEGAGTIEFIADGSEGLRADRIWFMEMNTRLQV HCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEEEECCEEEE EHPVTEEITGVDLVEWQLRVASGEPLPKRQDELSINGWAMEARLYAEDPTRGFLPSIGRV CCCCCHHCCCCEEEEEEEEECCCCCCCCCCCCCEECCEEEEEEEEECCCCCCCCCCCCCC DDFHFPHHHARIDTGVEAGAEISPFYDPMIAKLIVHRPTRTEAVSALRETLDEGIVGPLV CCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEE TNSGFLWRLLGHAAFEAGVVDTGLIERNLETLATRPEPSREGLALAAMRLAGTPGATPWS CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEHHHHCCCCCCCCCC SRSGFRMNAAPRRDVRLSDQFGRTFTTELPPEPAFDYWPGEDATTIDEGGERFRVRLARA CCCCEEECCCCCCCCEECHHCCCEEECCCCCCCCCCCCCCCCCCCHHCCCCEEEEEEEEC DGGSGGAASDGAILAPMPGKVISVDVSAGQSVTKGQKLMVLEAMKMEHALTAPFDGVVAE CCCCCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCHHHE LNAAPGGQVQVEALLAKIEKGEA ECCCCCCCEEHHHHHHHHHCCCC >Mature Secondary Structure MIKSLLVANRGEIACRVIRTARRMGVRTVAVYSDADANALHVRSADEAVHIGPAAARESY CCCCEEECCCCHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEECCCCEEEECCHHHHHHH LVGERIIAAALTTGAEAIHPGYGFLSENAEFAQAVLDAGLVWVGPKPHSITAMGLKDAAK HHHHHHHHHHHHCCCHHCCCCCCCCCCCHHHHHHHHHCCEEEECCCCCCEEEECCHHHHH ARMIAAGVPVTPGYLGEDQSAERLQAEADAIGYPVLIKAVAGGGGKGMRRVDAAADFAEA HHEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHH LASCRREAASSFGDDRVLIEKYILSPRHIEVQVFGDAHGNVVHLFERDCSLQRRHQKVIE HHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEEECCCCCEEEEEHHCCHHHHHHHHHHH EAPAPGMDEATREAVCAAAVRAAKAVDYEGAGTIEFIADGSEGLRADRIWFMEMNTRLQV HCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEEEECCEEEE EHPVTEEITGVDLVEWQLRVASGEPLPKRQDELSINGWAMEARLYAEDPTRGFLPSIGRV CCCCCHHCCCCEEEEEEEEECCCCCCCCCCCCCEECCEEEEEEEEECCCCCCCCCCCCCC DDFHFPHHHARIDTGVEAGAEISPFYDPMIAKLIVHRPTRTEAVSALRETLDEGIVGPLV CCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEE TNSGFLWRLLGHAAFEAGVVDTGLIERNLETLATRPEPSREGLALAAMRLAGTPGATPWS CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEHHHHCCCCCCCCCC SRSGFRMNAAPRRDVRLSDQFGRTFTTELPPEPAFDYWPGEDATTIDEGGERFRVRLARA CCCCEEECCCCCCCCEECHHCCCEEECCCCCCCCCCCCCCCCCCCHHCCCCEEEEEEEEC DGGSGGAASDGAILAPMPGKVISVDVSAGQSVTKGQKLMVLEAMKMEHALTAPFDGVVAE CCCCCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCHHHE LNAAPGGQVQVEALLAKIEKGEA ECCCCCCCEEHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]