Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is maoC [H]
Identifier: 87199658
GI number: 87199658
Start: 1715870
End: 1716319
Strand: Reverse
Name: maoC [H]
Synonym: Saro_1641
Alternate gene names: 87199658
Gene position: 1716319-1715870 (Counterclockwise)
Preceding gene: 87199659
Following gene: 87199657
Centisome position: 48.19
GC content: 59.56
Gene sequence:
>450_bases ATGGCTGGCAAGTTCTTCGACGAGTGGCAGGTGGGCGACCGGATCAGCCACGAAATCCGCCGCACCGTGACAGAGACCGA CAATCTCCTGTTCTCGACCATGACCCACAATCCACAACCGCTGCACATCGACGCAGAGGCAGCGAAGGCAAGCGAGTTCG GCCAGATCCTCGTCAACGGCACCTTCACATTCGCGCTGATGGTCGGGCTGTCGGTCGGCGACACGACTCTCGGTACGCTG GTTGCGAATCTGGGCTACGACAAGCTTGCAATGCCTTCGCCCGTGTTCATCGGCGATACCATGCGCGCGACCAGCGAGGT GACTGACCTGCGCGAGAGCAAGTCACGTCCCGATGCCGGAATTGTCACTTTCAAACATGAGCTTATCAACCAGCGCGAAG AGGTCGTCTGCCGTTGCCTGCGCACCGCGCTGCTCAAAAAACGGCAGTAA
Upstream 100 bases:
>100_bases CCGCCCCCTTCGACGGTGTCGTGGCCGAACTCAACGCCGCGCCGGGCGGACAGGTTCAGGTCGAGGCACTGCTGGCGAAG ATCGAAAAGGGAGAAGCCTG
Downstream 100 bases:
>100_bases TCCGCGCGACGTAATAGTCATTTCGGACTAAAAACTTTTGGTGAATTTCAAGTTAATTACAAACCTTGCGGAATATTAAA CCCGATTCCGTGGAAGTCGT
Product: MaoC-like dehydratase
Products: NA
Alternate protein names: Phenylacetic acid degradation protein paaZ [H]
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MAGKFFDEWQVGDRISHEIRRTVTETDNLLFSTMTHNPQPLHIDAEAAKASEFGQILVNGTFTFALMVGLSVGDTTLGTL VANLGYDKLAMPSPVFIGDTMRATSEVTDLRESKSRPDAGIVTFKHELINQREEVVCRCLRTALLKKRQ
Sequences:
>Translated_149_residues MAGKFFDEWQVGDRISHEIRRTVTETDNLLFSTMTHNPQPLHIDAEAAKASEFGQILVNGTFTFALMVGLSVGDTTLGTL VANLGYDKLAMPSPVFIGDTMRATSEVTDLRESKSRPDAGIVTFKHELINQREEVVCRCLRTALLKKRQ >Mature_148_residues AGKFFDEWQVGDRISHEIRRTVTETDNLLFSTMTHNPQPLHIDAEAAKASEFGQILVNGTFTFALMVGLSVGDTTLGTLV ANLGYDKLAMPSPVFIGDTMRATSEVTDLRESKSRPDAGIVTFKHELINQREEVVCRCLRTALLKKRQ
Specific function: Phenylacetic acid aerobic catabolism. [C]
COG id: COG2030
COG function: function code I; Acyl dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldehyde dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1787653, Length=138, Percent_Identity=34.0579710144928, Blast_Score=67, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR016163 - InterPro: IPR016162 - InterPro: IPR015590 - InterPro: IPR002539 - InterPro: IPR011966 [H]
Pfam domain/function: PF00171 Aldedh; PF01575 MaoC_dehydratas [H]
EC number: NA
Molecular weight: Translated: 16584; Mature: 16453
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGKFFDEWQVGDRISHEIRRTVTETDNLLFSTMTHNPQPLHIDAEAAKASEFGQILVNG CCCCCCCHHCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEHHHHHHHHHCEEEECC TFTFALMVGLSVGDTTLGTLVANLGYDKLAMPSPVFIGDTMRATSEVTDLRESKSRPDAG HHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCC IVTFKHELINQREEVVCRCLRTALLKKRQ EEEHHHHHHCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AGKFFDEWQVGDRISHEIRRTVTETDNLLFSTMTHNPQPLHIDAEAAKASEFGQILVNG CCCCCCHHCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEHHHHHHHHHCEEEECC TFTFALMVGLSVGDTTLGTLVANLGYDKLAMPSPVFIGDTMRATSEVTDLRESKSRPDAG HHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCC IVTFKHELINQREEVVCRCLRTALLKKRQ EEEHHHHHHCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9097039; 9278503; 10766858 [H]