Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is yhiN [H]

Identifier: 87199651

GI number: 87199651

Start: 1709675

End: 1710853

Strand: Reverse

Name: yhiN [H]

Synonym: Saro_1634

Alternate gene names: 87199651

Gene position: 1710853-1709675 (Counterclockwise)

Preceding gene: 87199652

Following gene: 87199649

Centisome position: 48.04

GC content: 67.51

Gene sequence:

>1179_bases
GTGAGCGCCGCCACCTTTGATGCAATAGTCCTCGGCGCGGGAGCGGCGGGCATGATGGCAGCCCTCACCGCCGGCCAGCG
CGGTCGTCGTGTCCTTCTCGTGGACCACGCCCCCGAACCAGGCAAAAAGATCCTGATCTCGGGCGGAGGGCGCTGCAACT
TCACCAATATCCACACTGCGCCAGACCGCTACCTCTCCGAAAACCCCCACTTCGCCCGTTCCGCCCTTGCCCGCTACACC
CCGGCGGACTTCCTCGCCCTGGTGAACCGCCACGCCATTGCGTGGCACGAGAAGACGCTCGGCCAGCTTTTCTGCGACCA
TTCCGCGCGCCAGATCGTCGACATGCTCGTGGCGGAATGCCGCGACGGAAGCGTTGCCTTCTCGTTCGGGGCGCCCGTCA
CCGCCGTCGACCATGGCGACGGGCTCTTCCGCATCACGGTCGATGGACGCGAACGCACGGCGCCTTCGCTTGTCCTTGCA
ACGGGCGGCCTTTCGATCCCGAAGATGGGCGCCACGGGCTTTTCGCTCGACCTTGCACGCCGCTTCGGCCTGCCAGTCGT
GCAGACCCGCCCCGCTCTCGTGCCATTCACCCTGGGCGAGGACGAGGCGTTGTTCCGCTCGCTATCGGGCGTCTCGGCCG
AAGTCGTGGCGCGCACAGGCAAGGTTTCCTTCCGCGAGGCCGCCCTCTTTACCCATCGCGGGCTGTCGGGTCCGGCAATG
CTCCAGGTCTCGTCCTACTGGCAGCACCGCACGCCGATCGCCGTCGATTTCCTGCCCGATGCGCAGAGCGACTGGCTGCT
CGAGGAAAAACGCGTCCGGCCCCGCGCAACCCTTCGCTCGACACTTGCCCGCCGCCTACCCGAACGGCTCGCCGAAGCGC
TGGCCGACCGGCTTTCCATCGAAAGCGAACTCGGCAACTGCCGTGACGCCGGCCTGCGCGCCGCGCAAGAGCGCCTTGCC
CGCTGGCCGTTCCAGCCCACGGGAACTGAAGGCTATGCCAAGGCCGAGGTCATGGCCGGCGGCATTTCCACACGCGCCCT
GTCGCAAAAGACGATGGAGGCAACGAAGGTTTCCGGGCTTTTTGCCGTGGGCGAGGCAGTCGACGTCACCGGGTGGCTTG
GCGGCTACAACTTCCAGTGGGCCTGGGCCAGCGGCCGCGCGGCGGGCGAAGCGCTCTAG

Upstream 100 bases:

>100_bases
TCTACCCGGCCGGCGAAGGCGCGGGCTATGCCGGCGGCATTCTCTCGGCGGCAGTAGATGGCATCAAGGTGGCCGAGGCC
CTCGCCGCGCAGCTCGTAAA

Downstream 100 bases:

>100_bases
GCCTAACCACCGATCAGGTCGAGGTAGGCGACTACATCATTGTCGGTCGCGATATAGAGCCCGGCCTGGATCGCCTCGGG
CTGGGCTGCCGCCATTTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MSAATFDAIVLGAGAAGMMAALTAGQRGRRVLLVDHAPEPGKKILISGGGRCNFTNIHTAPDRYLSENPHFARSALARYT
PADFLALVNRHAIAWHEKTLGQLFCDHSARQIVDMLVAECRDGSVAFSFGAPVTAVDHGDGLFRITVDGRERTAPSLVLA
TGGLSIPKMGATGFSLDLARRFGLPVVQTRPALVPFTLGEDEALFRSLSGVSAEVVARTGKVSFREAALFTHRGLSGPAM
LQVSSYWQHRTPIAVDFLPDAQSDWLLEEKRVRPRATLRSTLARRLPERLAEALADRLSIESELGNCRDAGLRAAQERLA
RWPFQPTGTEGYAKAEVMAGGISTRALSQKTMEATKVSGLFAVGEAVDVTGWLGGYNFQWAWASGRAAGEAL

Sequences:

>Translated_392_residues
MSAATFDAIVLGAGAAGMMAALTAGQRGRRVLLVDHAPEPGKKILISGGGRCNFTNIHTAPDRYLSENPHFARSALARYT
PADFLALVNRHAIAWHEKTLGQLFCDHSARQIVDMLVAECRDGSVAFSFGAPVTAVDHGDGLFRITVDGRERTAPSLVLA
TGGLSIPKMGATGFSLDLARRFGLPVVQTRPALVPFTLGEDEALFRSLSGVSAEVVARTGKVSFREAALFTHRGLSGPAM
LQVSSYWQHRTPIAVDFLPDAQSDWLLEEKRVRPRATLRSTLARRLPERLAEALADRLSIESELGNCRDAGLRAAQERLA
RWPFQPTGTEGYAKAEVMAGGISTRALSQKTMEATKVSGLFAVGEAVDVTGWLGGYNFQWAWASGRAAGEAL
>Mature_391_residues
SAATFDAIVLGAGAAGMMAALTAGQRGRRVLLVDHAPEPGKKILISGGGRCNFTNIHTAPDRYLSENPHFARSALARYTP
ADFLALVNRHAIAWHEKTLGQLFCDHSARQIVDMLVAECRDGSVAFSFGAPVTAVDHGDGLFRITVDGRERTAPSLVLAT
GGLSIPKMGATGFSLDLARRFGLPVVQTRPALVPFTLGEDEALFRSLSGVSAEVVARTGKVSFREAALFTHRGLSGPAML
QVSSYWQHRTPIAVDFLPDAQSDWLLEEKRVRPRATLRSTLARRLPERLAEALADRLSIESELGNCRDAGLRAAQERLAR
WPFQPTGTEGYAKAEVMAGGISTRALSQKTMEATKVSGLFAVGEAVDVTGWLGGYNFQWAWASGRAAGEAL

Specific function: Unknown

COG id: COG2081

COG function: function code R; Predicted flavoproteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0933 [H]

Homologues:

Organism=Escherichia coli, GI2367234, Length=399, Percent_Identity=51.6290726817043, Blast_Score=380, Evalue=1e-107,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004792
- InterPro:   IPR013027
- InterPro:   IPR023166 [H]

Pfam domain/function: PF03486 HI0933_like [H]

EC number: NA

Molecular weight: Translated: 42127; Mature: 41995

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAATFDAIVLGAGAAGMMAALTAGQRGRRVLLVDHAPEPGKKILISGGGRCNFTNIHTA
CCCCCEEEEEECCCHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEECCCEEECCCCCCC
PDRYLSENPHFARSALARYTPADFLALVNRHAIAWHEKTLGQLFCDHSARQIVDMLVAEC
CHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHEEHHHHHHHHHHCCHHHHHHHHHHHHC
RDGSVAFSFGAPVTAVDHGDGLFRITVDGRERTAPSLVLATGGLSIPKMGATGFSLDLAR
CCCCEEEECCCCEEEEECCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHH
RFGLPVVQTRPALVPFTLGEDEALFRSLSGVSAEVVARTGKVSFREAALFTHRGLSGPAM
HHCCCEEECCCCEEEEECCCHHHHHHHHCCCCCEEHHCCCCCCHHHHHHHHHCCCCCCEE
LQVSSYWQHRTPIAVDFLPDAQSDWLLEEKRVRPRATLRSTLARRLPERLAEALADRLSI
EEEHHHHCCCCCEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESELGNCRDAGLRAAQERLARWPFQPTGTEGYAKAEVMAGGISTRALSQKTMEATKVSGL
HHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEHEEEECCCHHHHHHHHHHHHHHHCCC
FAVGEAVDVTGWLGGYNFQWAWASGRAAGEAL
EEECCCEEEEEECCCCCEEEEECCCCCCCCCC
>Mature Secondary Structure 
SAATFDAIVLGAGAAGMMAALTAGQRGRRVLLVDHAPEPGKKILISGGGRCNFTNIHTA
CCCCEEEEEECCCHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEECCCEEECCCCCCC
PDRYLSENPHFARSALARYTPADFLALVNRHAIAWHEKTLGQLFCDHSARQIVDMLVAEC
CHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHEEHHHHHHHHHHCCHHHHHHHHHHHHC
RDGSVAFSFGAPVTAVDHGDGLFRITVDGRERTAPSLVLATGGLSIPKMGATGFSLDLAR
CCCCEEEECCCCEEEEECCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHH
RFGLPVVQTRPALVPFTLGEDEALFRSLSGVSAEVVARTGKVSFREAALFTHRGLSGPAM
HHCCCEEECCCCEEEEECCCHHHHHHHHCCCCCEEHHCCCCCCHHHHHHHHHCCCCCCEE
LQVSSYWQHRTPIAVDFLPDAQSDWLLEEKRVRPRATLRSTLARRLPERLAEALADRLSI
EEEHHHHCCCCCEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESELGNCRDAGLRAAQERLARWPFQPTGTEGYAKAEVMAGGISTRALSQKTMEATKVSGL
HHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEHEEEECCCHHHHHHHHHHHHHHHCCC
FAVGEAVDVTGWLGGYNFQWAWASGRAAGEAL
EEECCCEEEEEECCCCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]