BacMap

Definition	Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession	NC_007794
Length	3,561,584

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The map label for this gene is fabG [H]

Identifier: 87199139

GI number: 87199139

Start: 1163430

End: 1164230

Strand: Direct

Name: fabG [H]

Synonym: Saro_1117

Alternate gene names: 87199139

Gene position: 1163430-1164230 (Clockwise)

Preceding gene: 87199138

Following gene: 87199141

Centisome position: 32.67

GC content: 67.54

Gene sequence:

>801_bases
ATGGGCAAGACGATCTTCATCACCGGCGGCGCATCGGGCATCGGCCGGGCGGTGGCGCAGCGATTCGGGCAGGGCGGATG
GTTCGTCGGCATCGCCGACATCGATGAGGGCGGCATGATGCAGACCGCCGCGATGCTGCCGTCGGGCCGCTCGTCTCGCC
ACAAACTCGACGTGCGCGACCGTTCGGCATGGGACGCCGCGCTGGCCGATTGTGCCCGGGCCGGGGGTGGACGGATCGAT
GTCGTGTTCAACAACGCAGGGATTCCGATAGGCGGCGCTATCGCAGACCTTGCGGTCGAGGAGATCGAGCGGACGCTCGA
CATCAACCTCAAGGGCGTGATCTTCGGCGCGCAGGCGGCCTATCCCTGGCTAAGGGCGAGCGCACCCGGATCGGTTCTGC
TCAACACCGCGAGTGCCGCGGGCATCTATGGCTCGCCCGGCGCATCGGTCTATTCGGCCACGAAGTTCGGGGTACGTGCG
ATCACCGAATCGCTGGATGGGGAATGGGCGGAAGACGGCATCCGCGTGCGCGACCTCATGCCAGGCTTCATCGAGACGCC
GCTGCTCGATCATGCGCCCAACCGCGCCTCGAACGAGGACATCCGCTCGCGCGTTCGCGGCGCGGGGCTCGAGATCACGC
CGGTCAGCGAAGTGGCCGAAGCAGCGTGGGCCGCAGTGCATGGCGAGCGGTTGCACACGCTGGTCGGCAAGACTGCGCGG
CGGCTTGCATTCGCCTCCCGGTGGATGCCCGGCGCGCTCCGCAAACAGATGCGTTCGGCCGAGCGTCCCTTGGGCAAATA
G

Upstream 100 bases:

>100_bases
CCCCATCGCGGCGCGGCGGCGATCTTCACCTGGCATTGCTATAACAATCCGGCGCTGTAGTCTCTTGCTGACAAGCATGT
AGGCAAGAGGGACAGCCACA

Downstream 100 bases:

>100_bases
CCCTAGAGAAAGCTTTCCATCGCGCGCGCCATGTCGGCGTCGCGCGCGGAAAGACCGTCCGCGTCGTGGGTGGTCAGCGT
AACTTCGACGCGGTTGTAGA

Product: short chain dehydrogenase

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MGKTIFITGGASGIGRAVAQRFGQGGWFVGIADIDEGGMMQTAAMLPSGRSSRHKLDVRDRSAWDAALADCARAGGGRID
VVFNNAGIPIGGAIADLAVEEIERTLDINLKGVIFGAQAAYPWLRASAPGSVLLNTASAAGIYGSPGASVYSATKFGVRA
ITESLDGEWAEDGIRVRDLMPGFIETPLLDHAPNRASNEDIRSRVRGAGLEITPVSEVAEAAWAAVHGERLHTLVGKTAR
RLAFASRWMPGALRKQMRSAERPLGK

Sequences:

>Translated_266_residues
MGKTIFITGGASGIGRAVAQRFGQGGWFVGIADIDEGGMMQTAAMLPSGRSSRHKLDVRDRSAWDAALADCARAGGGRID
VVFNNAGIPIGGAIADLAVEEIERTLDINLKGVIFGAQAAYPWLRASAPGSVLLNTASAAGIYGSPGASVYSATKFGVRA
ITESLDGEWAEDGIRVRDLMPGFIETPLLDHAPNRASNEDIRSRVRGAGLEITPVSEVAEAAWAAVHGERLHTLVGKTAR
RLAFASRWMPGALRKQMRSAERPLGK
>Mature_265_residues
GKTIFITGGASGIGRAVAQRFGQGGWFVGIADIDEGGMMQTAAMLPSGRSSRHKLDVRDRSAWDAALADCARAGGGRIDV
VFNNAGIPIGGAIADLAVEEIERTLDINLKGVIFGAQAAYPWLRASAPGSVLLNTASAAGIYGSPGASVYSATKFGVRAI
TESLDGEWAEDGIRVRDLMPGFIETPLLDHAPNRASNEDIRSRVRGAGLEITPVSEVAEAAWAAVHGERLHTLVGKTARR
LAFASRWMPGALRKQMRSAERPLGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI4758504, Length=209, Percent_Identity=33.0143540669856, Blast_Score=85, Evalue=6e-17,
Organism=Homo sapiens, GI15277342, Length=203, Percent_Identity=28.0788177339901, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI40807363, Length=257, Percent_Identity=25.2918287937743, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI32483357, Length=214, Percent_Identity=30.8411214953271, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI223718074, Length=199, Percent_Identity=30.1507537688442, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI31542939, Length=196, Percent_Identity=29.5918367346939, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI4503817, Length=192, Percent_Identity=25.5208333333333, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI83715985, Length=210, Percent_Identity=31.9047619047619, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI40254992, Length=188, Percent_Identity=30.3191489361702, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI66933014, Length=212, Percent_Identity=28.3018867924528, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI20149619, Length=268, Percent_Identity=26.4925373134328, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI4504505, Length=192, Percent_Identity=29.6875, Blast_Score=66, Evalue=4e-11,
Organism=Escherichia coli, GI87082100, Length=205, Percent_Identity=32.1951219512195, Blast_Score=101, Evalue=4e-23,
Organism=Escherichia coli, GI1787820, Length=181, Percent_Identity=32.0441988950276, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI1787335, Length=241, Percent_Identity=29.045643153527, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1789208, Length=186, Percent_Identity=29.5698924731183, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788459, Length=191, Percent_Identity=29.3193717277487, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI2367175, Length=190, Percent_Identity=30, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1786701, Length=209, Percent_Identity=25.8373205741627, Blast_Score=62, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17555706, Length=194, Percent_Identity=31.9587628865979, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI25147288, Length=243, Percent_Identity=30.4526748971193, Blast_Score=87, Evalue=9e-18,
Organism=Caenorhabditis elegans, GI17508895, Length=196, Percent_Identity=27.5510204081633, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI193203115, Length=193, Percent_Identity=27.979274611399, Blast_Score=77, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI193203117, Length=193, Percent_Identity=27.979274611399, Blast_Score=77, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI17538182, Length=213, Percent_Identity=30.0469483568075, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17567345, Length=193, Percent_Identity=29.0155440414508, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17564282, Length=190, Percent_Identity=30, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI32563809, Length=221, Percent_Identity=33.4841628959276, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17507613, Length=221, Percent_Identity=33.4841628959276, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17562904, Length=209, Percent_Identity=30.622009569378, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI71994604, Length=199, Percent_Identity=27.1356783919598, Blast_Score=70, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17562990, Length=195, Percent_Identity=29.7435897435897, Blast_Score=70, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI71994600, Length=200, Percent_Identity=29, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17559104, Length=193, Percent_Identity=28.4974093264249, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI193204405, Length=193, Percent_Identity=28.4974093264249, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17560220, Length=198, Percent_Identity=30.3030303030303, Blast_Score=64, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI17560150, Length=195, Percent_Identity=27.1794871794872, Blast_Score=64, Evalue=1e-10,
Organism=Saccharomyces cerevisiae, GI6323882, Length=192, Percent_Identity=28.6458333333333, Blast_Score=77, Evalue=4e-15,
Organism=Saccharomyces cerevisiae, GI6322861, Length=194, Percent_Identity=30.9278350515464, Blast_Score=76, Evalue=6e-15,
Organism=Drosophila melanogaster, GI23397609, Length=225, Percent_Identity=32.4444444444444, Blast_Score=91, Evalue=6e-19,
Organism=Drosophila melanogaster, GI281364892, Length=197, Percent_Identity=32.994923857868, Blast_Score=91, Evalue=7e-19,
Organism=Drosophila melanogaster, GI24639444, Length=202, Percent_Identity=28.2178217821782, Blast_Score=85, Evalue=5e-17,
Organism=Drosophila melanogaster, GI24644339, Length=194, Percent_Identity=30.4123711340206, Blast_Score=81, Evalue=7e-16,
Organism=Drosophila melanogaster, GI116007236, Length=195, Percent_Identity=29.2307692307692, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI21356301, Length=193, Percent_Identity=26.4248704663212, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI17737361, Length=201, Percent_Identity=29.3532338308458, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI21355631, Length=170, Percent_Identity=28.2352941176471, Blast_Score=74, Evalue=7e-14,
Organism=Drosophila melanogaster, GI116007238, Length=181, Percent_Identity=29.2817679558011, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI28571526, Length=188, Percent_Identity=29.2553191489362, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI28571387, Length=195, Percent_Identity=30.2564102564103, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21357041, Length=188, Percent_Identity=28.1914893617021, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24665243, Length=196, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI221331218, Length=196, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24665264, Length=203, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24643142, Length=209, Percent_Identity=28.2296650717703, Blast_Score=67, Evalue=9e-12,
Organism=Drosophila melanogaster, GI24665247, Length=197, Percent_Identity=28.9340101522843, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI221331216, Length=197, Percent_Identity=28.9340101522843, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 28050; Mature: 27919

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKTIFITGGASGIGRAVAQRFGQGGWFVGIADIDEGGMMQTAAMLPSGRSSRHKLDVRD
CCCEEEEECCCHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHCCCCCCCCCEECCCC
RSAWDAALADCARAGGGRIDVVFNNAGIPIGGAIADLAVEEIERTLDINLKGVIFGAQAA
CHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCC
YPWLRASAPGSVLLNTASAAGIYGSPGASVYSATKFGVRAITESLDGEWAEDGIRVRDLM
CCHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCEEHHHHC
PGFIETPLLDHAPNRASNEDIRSRVRGAGLEITPVSEVAEAAWAAVHGERLHTLVGKTAR
CCHHHCCCCCCCCCCCCCHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
RLAFASRWMPGALRKQMRSAERPLGK
HHHHHHHCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
GKTIFITGGASGIGRAVAQRFGQGGWFVGIADIDEGGMMQTAAMLPSGRSSRHKLDVRD
CCEEEEECCCHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHCCCCCCCCCEECCCC
RSAWDAALADCARAGGGRIDVVFNNAGIPIGGAIADLAVEEIERTLDINLKGVIFGAQAA
CHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCC
YPWLRASAPGSVLLNTASAAGIYGSPGASVYSATKFGVRAITESLDGEWAEDGIRVRDLM
CCHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCEEHHHHC
PGFIETPLLDHAPNRASNEDIRSRVRGAGLEITPVSEVAEAAWAAVHGERLHTLVGKTAR
CCHHHCCCCCCCCCCCCCHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
RLAFASRWMPGALRKQMRSAERPLGK
HHHHHHHCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]